RNA–Protein interactions for RNA: ENST00000356663.7

TMEM259-202, Transcript of transmembrane protein 259, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM259, Length 2,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-202ENST00000356663 TRIM52Q96A61 297 aa29.99■■■□□ 2.39
TMEM259-202ENST00000356663 FANCIQ9NVI1 1328 aa29.99■■■□□ 2.39
TMEM259-202ENST00000356663 ANP32CO43423 234 aa29.98■■■□□ 2.39
TMEM259-202ENST00000356663 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
TMEM259-202ENST00000356663 ARHGAP35Q9NRY4 1499 aa29.96■■■□□ 2.39
TMEM259-202ENST00000356663 MAP3K1Q13233 1512 aa29.9■■■□□ 2.38
TMEM259-202ENST00000356663 SIN3AQ96ST3 1273 aa29.88■■■□□ 2.37
TMEM259-202ENST00000356663 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
TMEM259-202ENST00000356663 TIAM1Q13009 1591 aa29.85■■■□□ 2.37
TMEM259-202ENST00000356663 ERICH6Q7L0X2 663 aa29.83■■■□□ 2.37
TMEM259-202ENST00000356663 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
TMEM259-202ENST00000356663 MYT1LQ9UL68 1186 aa29.79■■■□□ 2.36
TMEM259-202ENST00000356663 HIRIP3Q9BW71 556 aaPredicted RBP29.73■■■□□ 2.35
TMEM259-202ENST00000356663 LRRC9Q6ZRR7 1453 aa29.73■■■□□ 2.35
TMEM259-202ENST00000356663 CUX1P39880 1505 aa29.71■■■□□ 2.35
TMEM259-202ENST00000356663 PHLDB1Q86UU1 1377 aa29.69■■■□□ 2.34
TMEM259-202ENST00000356663 ERICH6BQ5W0A0 696 aa29.68■■■□□ 2.34
TMEM259-202ENST00000356663 FAM50AQ14320 339 aaKnown RBP29.64■■■□□ 2.34
TMEM259-202ENST00000356663 HNRNPUQ00839 825 aaKnown RBP eCLIP29.6■■■□□ 2.33
TMEM259-202ENST00000356663 CFAP43Q8NDM7 1665 aa29.57■■■□□ 2.32
TMEM259-202ENST00000356663 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
TMEM259-202ENST00000356663 IRX6P78412 446 aaPredicted RBP29.54■■■□□ 2.32
TMEM259-202ENST00000356663 PPP4R2Q9NY27 417 aa29.53■■■□□ 2.32
TMEM259-202ENST00000356663 FHAD1B1AJZ9 1412 aa29.52■■■□□ 2.32
TMEM259-202ENST00000356663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.51■■■□□ 2.318e-7■■■■□ 19.5
TMEM259-202ENST00000356663 DEKP35659 375 aaKnown RBP29.46■■■□□ 2.31
TMEM259-202ENST00000356663 IGF1RP08069 1367 aa29.42■■■□□ 2.3
TMEM259-202ENST00000356663 PCF11O94913 1555 aaKnown RBP29.4■■■□□ 2.3
TMEM259-202ENST00000356663 UACAQ9BZF9 1416 aa29.35■■■□□ 2.29
TMEM259-202ENST00000356663 CCDC18Q5T9S5 1454 aa29.35■■■□□ 2.29
TMEM259-202ENST00000356663 CARMIL1Q5VZK9 1371 aa29.32■■■□□ 2.28
TMEM259-202ENST00000356663 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
TMEM259-202ENST00000356663 CFTRP13569 1480 aa29.31■■■□□ 2.28
TMEM259-202ENST00000356663 NOP58Q9Y2X3 529 aaKnown RBP29.29■■■□□ 2.28
TMEM259-202ENST00000356663 FYCO1Q9BQS8 1478 aa29.27■■■□□ 2.28
TMEM259-202ENST00000356663 HFM1A2PYH4 1435 aa29.27■■■□□ 2.28
TMEM259-202ENST00000356663 KDM5BQ9UGL1 1544 aa29.27■■■□□ 2.28
TMEM259-202ENST00000356663 WASHC2AQ641Q2 1341 aa29.25■■■□□ 2.27
TMEM259-202ENST00000356663 B4GALNT3Q6L9W6 998 aa29.24■■■□□ 2.27
TMEM259-202ENST00000356663 FGD6Q6ZV73 1430 aa29.24■■■□□ 2.27
TMEM259-202ENST00000356663 PTPN23Q9H3S7 1636 aa29.23■■■□□ 2.27
TMEM259-202ENST00000356663 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
TMEM259-202ENST00000356663 NCOA2Q15596 1464 aa29.22■■■□□ 2.27
TMEM259-202ENST00000356663 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
TMEM259-202ENST00000356663 ZBED9Q6R2W3 1325 aa29.2■■■□□ 2.26
TMEM259-202ENST00000356663 CASKIN1Q8WXD9 1431 aa29.19■■■□□ 2.26
TMEM259-202ENST00000356663 CNTLNQ9NXG0 1405 aa29.19■■■□□ 2.26
TMEM259-202ENST00000356663 AQRO60306 1485 aaKnown RBP eCLIP29.19■■■□□ 2.261e-11■■■■■ 37.1
TMEM259-202ENST00000356663 PRKCSHP14314 528 aaPredicted RBP29.19■■■□□ 2.26
TMEM259-202ENST00000356663 FGD5Q6ZNL6 1462 aa29.18■■■□□ 2.26
TMEM259-202ENST00000356663 HSPA5P11021 654 aaKnown RBP29.17■■■□□ 2.26
TMEM259-202ENST00000356663 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
TMEM259-202ENST00000356663 P3H3Q8IVL6 736 aa29.14■■■□□ 2.25
TMEM259-202ENST00000356663 EFCAB5A4FU69 1503 aa29.13■■■□□ 2.25
TMEM259-202ENST00000356663 FHOD3Q2V2M9 1422 aa29.12■■■□□ 2.25
TMEM259-202ENST00000356663 NBR1Q14596 966 aa29.12■■■□□ 2.25
TMEM259-202ENST00000356663 CCDC184Q52MB2 194 aa29.12■■■□□ 2.25
TMEM259-202ENST00000356663 NAIPQ13075 1403 aa29.11■■■□□ 2.25
TMEM259-202ENST00000356663 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
TMEM259-202ENST00000356663 PAK3O75914 559 aaPredicted RBP29.1■■■□□ 2.25
TMEM259-202ENST00000356663 EIF4G2P78344 907 aaKnown RBP eCLIP29.1■■■□□ 2.25
TMEM259-202ENST00000356663 PRKRIP1Q9H875 184 aaPredicted RBP29.09■■■□□ 2.25
TMEM259-202ENST00000356663 FAM9BQ8IZU0 186 aa29.07■■■□□ 2.24
TMEM259-202ENST00000356663 FMN1Q68DA7 1419 aa29.06■■■□□ 2.24
TMEM259-202ENST00000356663 MRS2Q9HD23 443 aa29.05■■■□□ 2.24
TMEM259-202ENST00000356663 ANP32AP39687 249 aaKnown RBP29.02■■■□□ 2.24
TMEM259-202ENST00000356663 IPO9Q96P70 1041 aaKnown RBP29■■■□□ 2.23
TMEM259-202ENST00000356663 NCOA1Q15788 1441 aa29■■■□□ 2.23
TMEM259-202ENST00000356663 RTL5Q5HYW3 569 aaPredicted RBP28.99■■■□□ 2.23
TMEM259-202ENST00000356663 MTUS2Q5JR59 1369 aa28.98■■■□□ 2.23
TMEM259-202ENST00000356663 CCDC7Q96M83 1385 aa28.98■■■□□ 2.23
TMEM259-202ENST00000356663 SMG6Q86US8 1419 aaKnown RBP28.94■■■□□ 2.22
TMEM259-202ENST00000356663 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
TMEM259-202ENST00000356663 HECW1Q76N89 1606 aa28.94■■■□□ 2.22
TMEM259-202ENST00000356663 SNAPC4Q5SXM2 1469 aa28.92■■■□□ 2.22
TMEM259-202ENST00000356663 ZBTB47Q9UFB7 747 aaPredicted RBP28.92■■■□□ 2.22
TMEM259-202ENST00000356663 C11orf95C9JLR9 678 aaPredicted RBP28.88■■■□□ 2.21
TMEM259-202ENST00000356663 CCDC136Q96JN2 1154 aa28.88■■■□□ 2.21
TMEM259-202ENST00000356663 CTTNBP2Q8WZ74 1663 aa28.88■■■□□ 2.21
TMEM259-202ENST00000356663 RNF123Q5XPI4 1314 aa28.88■■■□□ 2.21
TMEM259-202ENST00000356663 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
TMEM259-202ENST00000356663 DENND4BO75064 1496 aaPredicted RBP28.86■■■□□ 2.21
TMEM259-202ENST00000356663 AKNAQ7Z591 1439 aa28.85■■■□□ 2.21
TMEM259-202ENST00000356663 POLR1AO95602 1720 aaPredicted RBP28.85■■■□□ 2.21
TMEM259-202ENST00000356663 SUPT6HQ7KZ85 1726 aaKnown RBP28.85■■■□□ 2.21
TMEM259-202ENST00000356663 ABCA5Q8WWZ7 1642 aa28.84■■■□□ 2.21
TMEM259-202ENST00000356663 NUDCQ9Y266 331 aa28.83■■■□□ 2.21
TMEM259-202ENST00000356663 ANO8Q9HCE9 1232 aaPredicted RBP28.82■■■□□ 2.2
TMEM259-202ENST00000356663 L3MBTL2Q969R5 705 aa28.8■■■□□ 2.2
TMEM259-202ENST00000356663 CC2D2AQ9P2K1 1620 aa28.79■■■□□ 2.2
TMEM259-202ENST00000356663 LRRIQ1Q96JM4 1722 aa28.78■■■□□ 2.2
TMEM259-202ENST00000356663 EHBP1L1Q8N3D4 1523 aa28.78■■■□□ 2.2
TMEM259-202ENST00000356663 CUL7Q14999 1698 aa28.77■■■□□ 2.2
TMEM259-202ENST00000356663 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
TMEM259-202ENST00000356663 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
TMEM259-202ENST00000356663 KIF7Q2M1P5 1343 aa28.75■■■□□ 2.19
TMEM259-202ENST00000356663 RRP7BPQ9NSQ0 103 aa28.75■■■□□ 2.19
TMEM259-202ENST00000356663 UGGT2Q9NYU1 1516 aa28.72■■■□□ 2.19
TMEM259-202ENST00000356663 SPATA31E1Q6ZUB1 1445 aa28.71■■■□□ 2.19
TMEM259-202ENST00000356663 MPHOSPH9Q99550 1183 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms