RNA–Protein interactions for RNA: ENST00000356522.4

CD34-202, Transcript of CD34 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD34, Length 2,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD34-202ENST00000356522 CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
CD34-202ENST00000356522 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
CD34-202ENST00000356522 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
CD34-202ENST00000356522 ITGAEP38570 1179 aa23.95■■□□□ 1.42
CD34-202ENST00000356522 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
CD34-202ENST00000356522 LRRC9Q6ZRR7 1453 aa23.92■■□□□ 1.42
CD34-202ENST00000356522 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
CD34-202ENST00000356522 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
CD34-202ENST00000356522 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
CD34-202ENST00000356522 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
CD34-202ENST00000356522 CUL7Q14999 1698 aa23.87■■□□□ 1.41
CD34-202ENST00000356522 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
CD34-202ENST00000356522 CFAP43Q8NDM7 1665 aa23.86■■□□□ 1.41
CD34-202ENST00000356522 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
CD34-202ENST00000356522 SUPT16HQ9Y5B9 1047 aaKnown RBP23.84■■□□□ 1.41
CD34-202ENST00000356522 WDR97A6NE52 1622 aa23.83■■□□□ 1.41
CD34-202ENST00000356522 ANP32EQ9BTT0 268 aa23.82■■□□□ 1.4
CD34-202ENST00000356522 ATP1B4Q9UN42 357 aaPredicted RBP23.82■■□□□ 1.4
CD34-202ENST00000356522 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
CD34-202ENST00000356522 RAB3GAP2Q9H2M9 1393 aa23.81■■□□□ 1.4
CD34-202ENST00000356522 EFCAB5A4FU69 1503 aa23.8■■□□□ 1.4
CD34-202ENST00000356522 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
CD34-202ENST00000356522 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
CD34-202ENST00000356522 FYCO1Q9BQS8 1478 aa23.76■■□□□ 1.39
CD34-202ENST00000356522 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
CD34-202ENST00000356522 CASKIN1Q8WXD9 1431 aa23.74■■□□□ 1.39
CD34-202ENST00000356522 FAM50AQ14320 339 aaKnown RBP23.74■■□□□ 1.39
CD34-202ENST00000356522 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
CD34-202ENST00000356522 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
CD34-202ENST00000356522 SETD5Q9C0A6 1442 aa23.72■■□□□ 1.39
CD34-202ENST00000356522 MAPKBP1O60336 1514 aa23.71■■□□□ 1.39
CD34-202ENST00000356522 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
CD34-202ENST00000356522 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
CD34-202ENST00000356522 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
CD34-202ENST00000356522 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
CD34-202ENST00000356522 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
CD34-202ENST00000356522 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.38
CD34-202ENST00000356522 SAMD9Q5K651 1589 aa23.62■■□□□ 1.37
CD34-202ENST00000356522 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
CD34-202ENST00000356522 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
CD34-202ENST00000356522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.54■■□□□ 1.36
CD34-202ENST00000356522 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
CD34-202ENST00000356522 MTUS2Q5JR59 1369 aa23.53■■□□□ 1.36
CD34-202ENST00000356522 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
CD34-202ENST00000356522 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
CD34-202ENST00000356522 PBRM1Q86U86 1689 aa23.45■■□□□ 1.35
CD34-202ENST00000356522 NCOA2Q15596 1464 aa23.44■■□□□ 1.34
CD34-202ENST00000356522 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
CD34-202ENST00000356522 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
CD34-202ENST00000356522 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
CD34-202ENST00000356522 SUPT6HQ7KZ85 1726 aaKnown RBP23.39■■□□□ 1.34
CD34-202ENST00000356522 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
CD34-202ENST00000356522 MAGI3Q5TCQ9 1506 aa23.37■■□□□ 1.33
CD34-202ENST00000356522 CCDC18Q5T9S5 1454 aa23.37■■□□□ 1.33
CD34-202ENST00000356522 ADAMTS12P58397 1594 aa23.37■■□□□ 1.33
CD34-202ENST00000356522 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
CD34-202ENST00000356522 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
CD34-202ENST00000356522 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
CD34-202ENST00000356522 BCANQ96GW7 911 aa23.34■■□□□ 1.33
CD34-202ENST00000356522 PTPN23Q9H3S7 1636 aa23.34■■□□□ 1.33
CD34-202ENST00000356522 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
CD34-202ENST00000356522 TIMELESSQ9UNS1 1208 aa23.33■■□□□ 1.32
CD34-202ENST00000356522 ARHGEF11O15085 1522 aa23.31■■□□□ 1.32
CD34-202ENST00000356522 NAIPQ13075 1403 aa23.3■■□□□ 1.32
CD34-202ENST00000356522 HECW1Q76N89 1606 aa23.29■■□□□ 1.32
CD34-202ENST00000356522 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
CD34-202ENST00000356522 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
CD34-202ENST00000356522 ZNF608Q9ULD9 1512 aaPredicted RBP23.26■■□□□ 1.31
CD34-202ENST00000356522 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
CD34-202ENST00000356522 CDK13Q14004 1512 aaKnown RBP23.24■■□□□ 1.31
CD34-202ENST00000356522 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
CD34-202ENST00000356522 FKBP8Q14318 412 aa23.22■■□□□ 1.31
CD34-202ENST00000356522 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
CD34-202ENST00000356522 WDR62O43379 1518 aa23.21■■□□□ 1.31
CD34-202ENST00000356522 ARID3CA6NKF2 412 aa23.21■■□□□ 1.31
CD34-202ENST00000356522 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
CD34-202ENST00000356522 IFT140Q96RY7 1462 aa23.2■■□□□ 1.31
CD34-202ENST00000356522 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
CD34-202ENST00000356522 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
CD34-202ENST00000356522 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
CD34-202ENST00000356522 RRP7BPQ9NSQ0 103 aa23.17■■□□□ 1.3
CD34-202ENST00000356522 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
CD34-202ENST00000356522 GCC2Q8IWJ2 1684 aa23.12■■□□□ 1.29
CD34-202ENST00000356522 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
CD34-202ENST00000356522 DISP1Q96F81 1524 aa23.11■■□□□ 1.29
CD34-202ENST00000356522 KIAA0556O60303 1618 aa23.11■■□□□ 1.29
CD34-202ENST00000356522 MIA2Q96PC5 1412 aa23.1■■□□□ 1.29
CD34-202ENST00000356522 KDM6BO15054 1643 aa23.09■■□□□ 1.29
CD34-202ENST00000356522 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
CD34-202ENST00000356522 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
CD34-202ENST00000356522 KDM5BQ9UGL1 1544 aa23.07■■□□□ 1.28
CD34-202ENST00000356522 DENND4BO75064 1496 aaPredicted RBP23.07■■□□□ 1.28
CD34-202ENST00000356522 AKNAQ7Z591 1439 aa23.06■■□□□ 1.28
CD34-202ENST00000356522 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
CD34-202ENST00000356522 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
CD34-202ENST00000356522 NEFLP07196 543 aa23.03■■□□□ 1.28
CD34-202ENST00000356522 RAPGEF6Q8TEU7 1601 aa23.01■■□□□ 1.27
CD34-202ENST00000356522 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
CD34-202ENST00000356522 MSH5O43196 834 aa22.97■■□□□ 1.27
CD34-202ENST00000356522 DAPK1P53355 1430 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms