RNA–Protein interactions for RNA: ENST00000356404.7

PITPNM1-201, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-201ENST00000356404 PLEKHD1A6NEE1 506 aa22.53■■□□□ 1.2
PITPNM1-201ENST00000356404 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
PITPNM1-201ENST00000356404 CARMIL1Q5VZK9 1371 aa22.51■■□□□ 1.19
PITPNM1-201ENST00000356404 HNRNPUQ00839 825 aaKnown RBP eCLIP22.49■■□□□ 1.19
PITPNM1-201ENST00000356404 DAXXQ9UER7 740 aaPredicted RBP22.49■■□□□ 1.19
PITPNM1-201ENST00000356404 STAG3Q9UJ98 1225 aa22.49■■□□□ 1.19
PITPNM1-201ENST00000356404 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
PITPNM1-201ENST00000356404 CFDP1Q9UEE9 299 aaPredicted RBP22.48■■□□□ 1.19
PITPNM1-201ENST00000356404 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
PITPNM1-201ENST00000356404 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
PITPNM1-201ENST00000356404 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
PITPNM1-201ENST00000356404 FKBP8Q14318 412 aa22.38■■□□□ 1.17
PITPNM1-201ENST00000356404 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.16
PITPNM1-201ENST00000356404 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
PITPNM1-201ENST00000356404 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
PITPNM1-201ENST00000356404 PLEKHG5O94827 1062 aa22.3■■□□□ 1.16
PITPNM1-201ENST00000356404 FOXD1Q16676 465 aa22.29■■□□□ 1.16
PITPNM1-201ENST00000356404 MRS2Q9HD23 443 aa22.29■■□□□ 1.16
PITPNM1-201ENST00000356404 TMC1Q8TDI8 760 aa22.27■■□□□ 1.15
PITPNM1-201ENST00000356404 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
PITPNM1-201ENST00000356404 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.158e-7■■■■■ 28.7
PITPNM1-201ENST00000356404 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
PITPNM1-201ENST00000356404 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
PITPNM1-201ENST00000356404 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
PITPNM1-201ENST00000356404 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
PITPNM1-201ENST00000356404 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
PITPNM1-201ENST00000356404 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
PITPNM1-201ENST00000356404 VPS8Q8N3P4 1428 aa22.17■■□□□ 1.14
PITPNM1-201ENST00000356404 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
PITPNM1-201ENST00000356404 NEFMP07197 916 aa22.11■■□□□ 1.13
PITPNM1-201ENST00000356404 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
PITPNM1-201ENST00000356404 NPM2Q86SE8 214 aaKnown RBP22.08■■□□□ 1.13
PITPNM1-201ENST00000356404 FHOD3Q2V2M9 1422 aa22.08■■□□□ 1.12
PITPNM1-201ENST00000356404 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
PITPNM1-201ENST00000356404 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
PITPNM1-201ENST00000356404 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
PITPNM1-201ENST00000356404 MYT1Q01538 1121 aa22.04■■□□□ 1.12
PITPNM1-201ENST00000356404 MLECQ14165 292 aa22.03■■□□□ 1.12
PITPNM1-201ENST00000356404 DCAF11Q8TEB1 546 aa22.02■■□□□ 1.12
PITPNM1-201ENST00000356404 PPP1R15AO75807 674 aaPredicted RBP21.98■■□□□ 1.11
PITPNM1-201ENST00000356404 DNAJC5BQ9UF47 199 aa21.96■■□□□ 1.11
PITPNM1-201ENST00000356404 TNNT2P45379 298 aaPredicted RBP21.95■■□□□ 1.1
PITPNM1-201ENST00000356404 GGT6Q6P531 493 aa21.95■■□□□ 1.1
PITPNM1-201ENST00000356404 WDR43Q15061 677 aaKnown RBP eCLIP21.95■■□□□ 1.1
PITPNM1-201ENST00000356404 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
PITPNM1-201ENST00000356404 PKD2Q13563 968 aa21.94■■□□□ 1.1
PITPNM1-201ENST00000356404 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
PITPNM1-201ENST00000356404 ZBTB47Q9UFB7 747 aaPredicted RBP21.94■■□□□ 1.1
PITPNM1-201ENST00000356404 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
PITPNM1-201ENST00000356404 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
PITPNM1-201ENST00000356404 PPM1GO15355 546 aaPredicted RBP21.91■■□□□ 1.1
PITPNM1-201ENST00000356404 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
PITPNM1-201ENST00000356404 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
PITPNM1-201ENST00000356404 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.1
PITPNM1-201ENST00000356404 NEUROD2Q15784 382 aa21.89■■□□□ 1.1
PITPNM1-201ENST00000356404 CCDC136Q96JN2 1154 aa21.89■■□□□ 1.09
PITPNM1-201ENST00000356404 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
PITPNM1-201ENST00000356404 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
PITPNM1-201ENST00000356404 C14orf37Q86TY3 774 aa21.87■■□□□ 1.09
PITPNM1-201ENST00000356404 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
PITPNM1-201ENST00000356404 SUPT16HQ9Y5B9 1047 aaKnown RBP21.86■■□□□ 1.09
PITPNM1-201ENST00000356404 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
PITPNM1-201ENST00000356404 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
PITPNM1-201ENST00000356404 MPHOSPH9Q99550 1183 aa21.84■■□□□ 1.09
PITPNM1-201ENST00000356404 IGF1RP08069 1367 aa21.83■■□□□ 1.09
PITPNM1-201ENST00000356404 HSPA5P11021 654 aaKnown RBP21.8■■□□□ 1.08
PITPNM1-201ENST00000356404 KNSTRNQ9Y448 316 aa21.79■■□□□ 1.08
PITPNM1-201ENST00000356404 FMN1Q68DA7 1419 aa21.77■■□□□ 1.08
PITPNM1-201ENST00000356404 NUP155O75694 1391 aa21.76■■□□□ 1.07
PITPNM1-201ENST00000356404 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
PITPNM1-201ENST00000356404 L3MBTL2Q969R5 705 aa21.75■■□□□ 1.07
PITPNM1-201ENST00000356404 NUTM2DQ5VT03 806 aaPredicted RBP21.75■■□□□ 1.07
PITPNM1-201ENST00000356404 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
PITPNM1-201ENST00000356404 NESP48681 1621 aa21.72■■□□□ 1.07
PITPNM1-201ENST00000356404 STK26Q9P289 416 aa21.72■■□□□ 1.07
PITPNM1-201ENST00000356404 SOX12O15370 315 aa21.71■■□□□ 1.07
PITPNM1-201ENST00000356404 POGKQ9P215 609 aa21.71■■□□□ 1.07
PITPNM1-201ENST00000356404 A0A0G2JS52 829 aa21.71■■□□□ 1.07
PITPNM1-201ENST00000356404 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
PITPNM1-201ENST00000356404 KIF3BO15066 747 aa21.7■■□□□ 1.06
PITPNM1-201ENST00000356404 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.061e-6■■□□□ 13.1
PITPNM1-201ENST00000356404 ANP32AP39687 249 aaKnown RBP21.69■■□□□ 1.06
PITPNM1-201ENST00000356404 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
PITPNM1-201ENST00000356404 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
PITPNM1-201ENST00000356404 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
PITPNM1-201ENST00000356404 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
PITPNM1-201ENST00000356404 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
PITPNM1-201ENST00000356404 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
PITPNM1-201ENST00000356404 DHX57Q6P158 1386 aaKnown RBP21.57■■□□□ 1.04
PITPNM1-201ENST00000356404 U2SURPO15042 1029 aaKnown RBP21.57■■□□□ 1.04
PITPNM1-201ENST00000356404 SRPK2P78362 688 aaKnown RBP21.56■■□□□ 1.04
PITPNM1-201ENST00000356404 CDCA8Q53HL2 280 aa21.55■■□□□ 1.04
PITPNM1-201ENST00000356404 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
PITPNM1-201ENST00000356404 B4GALNT3Q6L9W6 998 aa21.54■■□□□ 1.04
PITPNM1-201ENST00000356404 TMF1P82094 1093 aa21.54■■□□□ 1.04
PITPNM1-201ENST00000356404 NBR1Q14596 966 aa21.53■■□□□ 1.04
PITPNM1-201ENST00000356404 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
PITPNM1-201ENST00000356404 ANKRD30AQ9BXX3 1397 aa21.53■■□□□ 1.04
PITPNM1-201ENST00000356404 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
PITPNM1-201ENST00000356404 PTPRGP23470 1445 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms