RNA–Protein interactions for RNA: ENST00000356404.7

PITPNM1-201, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-201ENST00000356404 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
PITPNM1-201ENST00000356404 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
PITPNM1-201ENST00000356404 SUPT5HO00267 1087 aaKnown RBP28.24■■■□□ 2.11
PITPNM1-201ENST00000356404 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
PITPNM1-201ENST00000356404 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
PITPNM1-201ENST00000356404 FAM9AQ8IZU1 332 aaPredicted RBP26.63■■□□□ 1.85
PITPNM1-201ENST00000356404 TTBK1Q5TCY1 1321 aaPredicted RBP26.24■■□□□ 1.79
PITPNM1-201ENST00000356404 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
PITPNM1-201ENST00000356404 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
PITPNM1-201ENST00000356404 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
PITPNM1-201ENST00000356404 APLP2Q06481 763 aa25.64■■□□□ 1.69
PITPNM1-201ENST00000356404 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
PITPNM1-201ENST00000356404 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
PITPNM1-201ENST00000356404 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
PITPNM1-201ENST00000356404 ABCC9O60706 1549 aa25.45■■□□□ 1.67
PITPNM1-201ENST00000356404 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
PITPNM1-201ENST00000356404 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
PITPNM1-201ENST00000356404 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
PITPNM1-201ENST00000356404 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
PITPNM1-201ENST00000356404 ITGAEP38570 1179 aa24.77■■□□□ 1.56
PITPNM1-201ENST00000356404 TRIM26Q12899 539 aaPredicted RBP24.63■■□□□ 1.53
PITPNM1-201ENST00000356404 HNRNPUL2Q1KMD3 747 aaKnown RBP24.6■■□□□ 1.53
PITPNM1-201ENST00000356404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
PITPNM1-201ENST00000356404 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
PITPNM1-201ENST00000356404 YTHDC1Q96MU7 727 aaKnown RBP24.43■■□□□ 1.5
PITPNM1-201ENST00000356404 HRCP23327 699 aa24.35■■□□□ 1.49
PITPNM1-201ENST00000356404 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
PITPNM1-201ENST00000356404 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
PITPNM1-201ENST00000356404 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
PITPNM1-201ENST00000356404 MYT1LQ9UL68 1186 aa24.1■■□□□ 1.45
PITPNM1-201ENST00000356404 P3H3Q8IVL6 736 aa24.08■■□□□ 1.45
PITPNM1-201ENST00000356404 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
PITPNM1-201ENST00000356404 FBLN2P98095 1184 aa24.05■■□□□ 1.44
PITPNM1-201ENST00000356404 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
PITPNM1-201ENST00000356404 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
PITPNM1-201ENST00000356404 FAM50AQ14320 339 aaKnown RBP24■■□□□ 1.43
PITPNM1-201ENST00000356404 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
PITPNM1-201ENST00000356404 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
PITPNM1-201ENST00000356404 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
PITPNM1-201ENST00000356404 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
PITPNM1-201ENST00000356404 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PITPNM1-201ENST00000356404 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
PITPNM1-201ENST00000356404 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
PITPNM1-201ENST00000356404 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
PITPNM1-201ENST00000356404 NEFLP07196 543 aa23.51■■□□□ 1.35
PITPNM1-201ENST00000356404 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
PITPNM1-201ENST00000356404 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
PITPNM1-201ENST00000356404 ZNF777Q9ULD5 760 aaPredicted RBP23.43■■□□□ 1.34
PITPNM1-201ENST00000356404 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
PITPNM1-201ENST00000356404 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
PITPNM1-201ENST00000356404 CHIC2Q9UKJ5 165 aa23.22■■□□□ 1.31
PITPNM1-201ENST00000356404 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.31
PITPNM1-201ENST00000356404 NACADO15069 1562 aa23.15■■□□□ 1.3
PITPNM1-201ENST00000356404 ZNF316A6NFI3 1004 aaPredicted RBP23.13■■□□□ 1.29
PITPNM1-201ENST00000356404 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
PITPNM1-201ENST00000356404 BCANQ96GW7 911 aa23.08■■□□□ 1.29
PITPNM1-201ENST00000356404 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
PITPNM1-201ENST00000356404 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
PITPNM1-201ENST00000356404 HIRIP3Q9BW71 556 aaPredicted RBP23.02■■□□□ 1.28
PITPNM1-201ENST00000356404 CLIP1P30622 1438 aa23.02■■□□□ 1.27
PITPNM1-201ENST00000356404 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
PITPNM1-201ENST00000356404 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
PITPNM1-201ENST00000356404 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
PITPNM1-201ENST00000356404 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
PITPNM1-201ENST00000356404 CEP162Q5TB80 1403 aa22.92■■□□□ 1.26
PITPNM1-201ENST00000356404 SOGA1O94964 1423 aa22.92■■□□□ 1.26
PITPNM1-201ENST00000356404 ANP32CO43423 234 aa22.91■■□□□ 1.26
PITPNM1-201ENST00000356404 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
PITPNM1-201ENST00000356404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
PITPNM1-201ENST00000356404 DDX10Q13206 875 aaKnown RBP22.88■■□□□ 1.25
PITPNM1-201ENST00000356404 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
PITPNM1-201ENST00000356404 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
PITPNM1-201ENST00000356404 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
PITPNM1-201ENST00000356404 MTUS2Q5JR59 1369 aa22.84■■□□□ 1.25
PITPNM1-201ENST00000356404 KCNH8Q96L42 1107 aa22.84■■□□□ 1.25
PITPNM1-201ENST00000356404 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
PITPNM1-201ENST00000356404 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
PITPNM1-201ENST00000356404 KDM2AQ9Y2K7 1162 aa22.75■■□□□ 1.23
PITPNM1-201ENST00000356404 TONSLQ96HA7 1378 aa22.74■■□□□ 1.23
PITPNM1-201ENST00000356404 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
PITPNM1-201ENST00000356404 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
PITPNM1-201ENST00000356404 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
PITPNM1-201ENST00000356404 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
PITPNM1-201ENST00000356404 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
PITPNM1-201ENST00000356404 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
PITPNM1-201ENST00000356404 TSPY4P0CV99 314 aa22.65■■□□□ 1.22
PITPNM1-201ENST00000356404 TSPY10P0CW01 314 aa22.65■■□□□ 1.22
PITPNM1-201ENST00000356404 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
PITPNM1-201ENST00000356404 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
PITPNM1-201ENST00000356404 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
PITPNM1-201ENST00000356404 MIER1Q8N108 512 aa22.62■■□□□ 1.21
PITPNM1-201ENST00000356404 WIZO95785 1651 aa22.61■■□□□ 1.21
PITPNM1-201ENST00000356404 EEA1Q15075 1411 aa22.59■■□□□ 1.21
PITPNM1-201ENST00000356404 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
PITPNM1-201ENST00000356404 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.2
PITPNM1-201ENST00000356404 CUX2O14529 1486 aa22.56■■□□□ 1.2
PITPNM1-201ENST00000356404 CLSPNQ9HAW4 1339 aa22.56■■□□□ 1.2
PITPNM1-201ENST00000356404 KANK4Q5T7N3 995 aaPredicted RBP22.55■■□□□ 1.2
PITPNM1-201ENST00000356404 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
PITPNM1-201ENST00000356404 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms