RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 CEP170Q5SW79 1584 aa38.72■■■■□ 3.79
CHKA-202ENST00000356135 NUP160Q12769 1436 aa38.68■■■■□ 3.78
CHKA-202ENST00000356135 CTTNBP2Q8WZ74 1663 aa38.66■■■■□ 3.78
CHKA-202ENST00000356135 CEP162Q5TB80 1403 aa38.61■■■■□ 3.77
CHKA-202ENST00000356135 KIAA0586Q9BVV6 1533 aa38.59■■■■□ 3.77
CHKA-202ENST00000356135 IQGAP2Q13576 1575 aa38.53■■■■□ 3.76
CHKA-202ENST00000356135 CLIP1P30622 1438 aa38.5■■■■□ 3.75
CHKA-202ENST00000356135 OSCARQ8IYS5 282 aa38.47■■■■□ 3.75
CHKA-202ENST00000356135 JPH4Q96JJ6 628 aa38.42■■■■□ 3.74
CHKA-202ENST00000356135 P3H3Q8IVL6 736 aa38.42■■■■□ 3.74
CHKA-202ENST00000356135 ARHGAP35Q9NRY4 1499 aa38.38■■■■□ 3.73
CHKA-202ENST00000356135 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.73
CHKA-202ENST00000356135 UGGT2Q9NYU1 1516 aa38.34■■■■□ 3.73
CHKA-202ENST00000356135 ARAP1Q96P48 1450 aa38.26■■■■□ 3.72
CHKA-202ENST00000356135 SAMD9Q5K651 1589 aa38.26■■■■□ 3.71
CHKA-202ENST00000356135 DISP1Q96F81 1524 aa38.24■■■■□ 3.71
CHKA-202ENST00000356135 EFCAB5A4FU69 1503 aa38.24■■■■□ 3.71
CHKA-202ENST00000356135 FHOD3Q2V2M9 1422 aa38.23■■■■□ 3.71
CHKA-202ENST00000356135 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
CHKA-202ENST00000356135 SHROOM2Q13796 1616 aa38.21■■■■□ 3.71
CHKA-202ENST00000356135 KIAA0556O60303 1618 aa38.16■■■■□ 3.7
CHKA-202ENST00000356135 TTBK1Q5TCY1 1321 aaPredicted RBP38.14■■■■□ 3.7
CHKA-202ENST00000356135 CARMIL2Q6F5E8 1435 aa38.12■■■■□ 3.69
CHKA-202ENST00000356135 ERCC6L2Q5T890 1561 aa38.12■■■■□ 3.69
CHKA-202ENST00000356135 VPS8Q8N3P4 1428 aa38.03■■■■□ 3.68
CHKA-202ENST00000356135 FMN1Q68DA7 1419 aa37.93■■■■□ 3.66
CHKA-202ENST00000356135 PTPRGP23470 1445 aa37.89■■■■□ 3.66
CHKA-202ENST00000356135 ATP1B4Q9UN42 357 aaPredicted RBP37.88■■■■□ 3.65
CHKA-202ENST00000356135 PCF11O94913 1555 aaKnown RBP37.82■■■■□ 3.64
CHKA-202ENST00000356135 PLB1Q6P1J6 1458 aa37.79■■■■□ 3.64
CHKA-202ENST00000356135 ARHGEF11O15085 1522 aa37.79■■■■□ 3.64
CHKA-202ENST00000356135 CASKIN1Q8WXD9 1431 aa37.78■■■■□ 3.64
CHKA-202ENST00000356135 FYCO1Q9BQS8 1478 aa37.71■■■■□ 3.63
CHKA-202ENST00000356135 ARID3CA6NKF2 412 aa37.71■■■■□ 3.63
CHKA-202ENST00000356135 PPARGC1BQ86YN6 1023 aaKnown RBP37.69■■■■□ 3.62
CHKA-202ENST00000356135 RAPGEF6Q8TEU7 1601 aa37.69■■■■□ 3.62
CHKA-202ENST00000356135 RIMBP3CA6NJZ7 1639 aa37.67■■■■□ 3.62
CHKA-202ENST00000356135 RIMBP3BA6NNM3 1639 aa37.67■■■■□ 3.62
CHKA-202ENST00000356135 RIMBP3Q9UFD9 1639 aa37.67■■■■□ 3.62
CHKA-202ENST00000356135 ABCA8O94911 1581 aa37.67■■■■□ 3.62
CHKA-202ENST00000356135 APLP2Q06481 763 aa37.65■■■■□ 3.62
CHKA-202ENST00000356135 UACAQ9BZF9 1416 aa37.64■■■■□ 3.62
CHKA-202ENST00000356135 NUP153P49790 1475 aaKnown RBP37.61■■■■□ 3.61
CHKA-202ENST00000356135 HECW1Q76N89 1606 aa37.6■■■■□ 3.61
CHKA-202ENST00000356135 LRRIQ1Q96JM4 1722 aa37.59■■■■□ 3.61
CHKA-202ENST00000356135 EPRSP07814 1512 aaKnown RBP37.54■■■■□ 3.6
CHKA-202ENST00000356135 CYB5RLQ6IPT4 315 aa37.54■■■■□ 3.6
CHKA-202ENST00000356135 KANK4Q5T7N3 995 aaPredicted RBP37.52■■■■□ 3.6
CHKA-202ENST00000356135 CDK13Q14004 1512 aaKnown RBP37.52■■■■□ 3.6
CHKA-202ENST00000356135 ABCC2Q92887 1545 aa37.51■■■■□ 3.6
CHKA-202ENST00000356135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.5■■■■□ 3.59
CHKA-202ENST00000356135 HNRNPUL2Q1KMD3 747 aaKnown RBP37.5■■■■□ 3.59
CHKA-202ENST00000356135 TIAM1Q13009 1591 aa37.49■■■■□ 3.59
CHKA-202ENST00000356135 UHRF1BP1LA0JNW5 1464 aa37.46■■■■□ 3.59
CHKA-202ENST00000356135 ATP10BO94823 1461 aa37.45■■■■□ 3.59
CHKA-202ENST00000356135 CCDC18Q5T9S5 1454 aa37.45■■■■□ 3.59
CHKA-202ENST00000356135 ADCY10Q96PN6 1610 aa37.44■■■■□ 3.58
CHKA-202ENST00000356135 MAP3K1Q13233 1512 aa37.44■■■■□ 3.58
CHKA-202ENST00000356135 CFAP43Q8NDM7 1665 aa37.42■■■■□ 3.58
CHKA-202ENST00000356135 DNAJC5Q9H3Z4 198 aa37.37■■■■□ 3.57
CHKA-202ENST00000356135 LRRC9Q6ZRR7 1453 aa37.35■■■■□ 3.57
CHKA-202ENST00000356135 MAGI3Q5TCQ9 1506 aa37.33■■■■□ 3.57
CHKA-202ENST00000356135 KDM5BQ9UGL1 1544 aa37.32■■■■□ 3.56
CHKA-202ENST00000356135 MTUS2Q5JR59 1369 aa37.29■■■■□ 3.56
CHKA-202ENST00000356135 ZCCHC11Q5TAX3 1644 aaKnown RBP37.28■■■■□ 3.56
CHKA-202ENST00000356135 CDK11AQ9UQ88 783 aaPredicted RBP37.27■■■■□ 3.56
CHKA-202ENST00000356135 PLEKHD1A6NEE1 506 aa37.24■■■■□ 3.55
CHKA-202ENST00000356135 NPM1P06748 294 aaKnown RBP eCLIP37.22■■■■□ 3.55
CHKA-202ENST00000356135 EHBP1L1Q8N3D4 1523 aa37.17■■■■□ 3.54
CHKA-202ENST00000356135 TROQ12816 1431 aaPredicted RBP37.15■■■■□ 3.54
CHKA-202ENST00000356135 KCNH8Q96L42 1107 aa37.09■■■■□ 3.53
CHKA-202ENST00000356135 ASXL2Q76L83 1435 aa37.06■■■■□ 3.52
CHKA-202ENST00000356135 NCOA2Q15596 1464 aa37.05■■■■□ 3.52
CHKA-202ENST00000356135 SUPT6HQ7KZ85 1726 aaKnown RBP37.03■■■■□ 3.52
CHKA-202ENST00000356135 KIF14Q15058 1648 aa37.03■■■■□ 3.52
CHKA-202ENST00000356135 PHLDB1Q86UU1 1377 aa37.02■■■■□ 3.52
CHKA-202ENST00000356135 WDR7Q9Y4E6 1490 aa36.99■■■■□ 3.51
CHKA-202ENST00000356135 MAPKBP1O60336 1514 aa36.9■■■■□ 3.5
CHKA-202ENST00000356135 ABCC10Q5T3U5 1492 aa36.88■■■■□ 3.49
CHKA-202ENST00000356135 CCNB3Q8WWL7 1395 aa36.87■■■■□ 3.49
CHKA-202ENST00000356135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.86■■■■□ 3.49
CHKA-202ENST00000356135 TRIM26Q12899 539 aaPredicted RBP36.86■■■■□ 3.49
CHKA-202ENST00000356135 MYOM3Q5VTT5 1437 aa36.83■■■■□ 3.49
CHKA-202ENST00000356135 TTC37Q6PGP7 1564 aa36.81■■■■□ 3.48
CHKA-202ENST00000356135 GPATCH8Q9UKJ3 1502 aaKnown RBP36.8■■■■□ 3.48
CHKA-202ENST00000356135 FGD6Q6ZV73 1430 aa36.75■■■■□ 3.47
CHKA-202ENST00000356135 RRBP1Q9P2E9 1410 aaKnown RBP36.75■■■■□ 3.47
CHKA-202ENST00000356135 CFDP1Q9UEE9 299 aaPredicted RBP36.72■■■■□ 3.47
CHKA-202ENST00000356135 CDC42BPAQ5VT25 1732 aa36.72■■■■□ 3.47
CHKA-202ENST00000356135 PCGF6Q9BYE7 350 aa36.71■■■■□ 3.47
CHKA-202ENST00000356135 FAM50AQ14320 339 aaKnown RBP36.69■■■■□ 3.46
CHKA-202ENST00000356135 ABCA9Q8IUA7 1624 aa36.68■■■■□ 3.46
CHKA-202ENST00000356135 ZNF777Q9ULD5 760 aaPredicted RBP36.68■■■■□ 3.46
CHKA-202ENST00000356135 ZNF644Q9H582 1327 aaPredicted RBP36.68■■■■□ 3.46
CHKA-202ENST00000356135 FAM69CQ0P6D2 419 aa36.66■■■■□ 3.46
CHKA-202ENST00000356135 MIA2Q96PC5 1412 aa36.66■■■■□ 3.46
CHKA-202ENST00000356135 ITSN2Q9NZM3 1697 aa36.65■■■■□ 3.46
CHKA-202ENST00000356135 PLCH2O75038 1416 aa36.63■■■■□ 3.46
CHKA-202ENST00000356135 CDC42BPBQ9Y5S2 1711 aa36.63■■■■□ 3.45
CHKA-202ENST00000356135 MYO5CQ9NQX4 1742 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms