RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
NCDN-201ENST00000356090 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
NCDN-201ENST00000356090 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
NCDN-201ENST00000356090 CUX1P39880 1505 aa18.78■□□□□ 0.6
NCDN-201ENST00000356090 TONSLQ96HA7 1378 aa18.76■□□□□ 0.59
NCDN-201ENST00000356090 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
NCDN-201ENST00000356090 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
NCDN-201ENST00000356090 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
NCDN-201ENST00000356090 WDR97A6NE52 1622 aa18.71■□□□□ 0.58
NCDN-201ENST00000356090 IGF1RP08069 1367 aa18.7■□□□□ 0.58
NCDN-201ENST00000356090 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
NCDN-201ENST00000356090 PPP1R15AO75807 674 aaPredicted RBP18.69■□□□□ 0.58
NCDN-201ENST00000356090 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
NCDN-201ENST00000356090 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
NCDN-201ENST00000356090 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
NCDN-201ENST00000356090 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
NCDN-201ENST00000356090 MAPKBP1O60336 1514 aa18.66■□□□□ 0.58
NCDN-201ENST00000356090 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
NCDN-201ENST00000356090 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
NCDN-201ENST00000356090 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
NCDN-201ENST00000356090 MTUS2Q5JR59 1369 aa18.6■□□□□ 0.57
NCDN-201ENST00000356090 POLR3GLQ9BT43 218 aa18.6■□□□□ 0.57
NCDN-201ENST00000356090 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
NCDN-201ENST00000356090 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
NCDN-201ENST00000356090 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
NCDN-201ENST00000356090 FAM9BQ8IZU0 186 aa18.57■□□□□ 0.56
NCDN-201ENST00000356090 CDK11AQ9UQ88 783 aaPredicted RBP18.57■□□□□ 0.56
NCDN-201ENST00000356090 CFTRP13569 1480 aa18.56■□□□□ 0.56
NCDN-201ENST00000356090 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
NCDN-201ENST00000356090 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
NCDN-201ENST00000356090 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
NCDN-201ENST00000356090 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
NCDN-201ENST00000356090 PRKCSHP14314 528 aaPredicted RBP18.52■□□□□ 0.56
NCDN-201ENST00000356090 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
NCDN-201ENST00000356090 FOXD1Q16676 465 aa18.48■□□□□ 0.55
NCDN-201ENST00000356090 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
NCDN-201ENST00000356090 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
NCDN-201ENST00000356090 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
NCDN-201ENST00000356090 ZNF326Q5BKZ1 582 aaKnown RBP18.44■□□□□ 0.54
NCDN-201ENST00000356090 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
NCDN-201ENST00000356090 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
NCDN-201ENST00000356090 CCDC18Q5T9S5 1454 aa18.43■□□□□ 0.54
NCDN-201ENST00000356090 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
NCDN-201ENST00000356090 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.54
NCDN-201ENST00000356090 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
NCDN-201ENST00000356090 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
NCDN-201ENST00000356090 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
NCDN-201ENST00000356090 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
NCDN-201ENST00000356090 MSH5O43196 834 aa18.36■□□□□ 0.53
NCDN-201ENST00000356090 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
NCDN-201ENST00000356090 MAP3K1Q13233 1512 aa18.34■□□□□ 0.53
NCDN-201ENST00000356090 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
NCDN-201ENST00000356090 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
NCDN-201ENST00000356090 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
NCDN-201ENST00000356090 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
NCDN-201ENST00000356090 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
NCDN-201ENST00000356090 CASKIN1Q8WXD9 1431 aa18.31■□□□□ 0.52
NCDN-201ENST00000356090 PPP4R2Q9NY27 417 aa18.29■□□□□ 0.52
NCDN-201ENST00000356090 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
NCDN-201ENST00000356090 NBR1Q14596 966 aa18.27■□□□□ 0.52
NCDN-201ENST00000356090 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
NCDN-201ENST00000356090 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.518e-7■■■■■ 33.1
NCDN-201ENST00000356090 HFM1A2PYH4 1435 aa18.25■□□□□ 0.51
NCDN-201ENST00000356090 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
NCDN-201ENST00000356090 NAIPQ13075 1403 aa18.25■□□□□ 0.51
NCDN-201ENST00000356090 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
NCDN-201ENST00000356090 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
NCDN-201ENST00000356090 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
NCDN-201ENST00000356090 PRKRIP1Q9H875 184 aaPredicted RBP18.23■□□□□ 0.51
NCDN-201ENST00000356090 NESP48681 1621 aa18.22■□□□□ 0.51
NCDN-201ENST00000356090 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
NCDN-201ENST00000356090 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
NCDN-201ENST00000356090 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
NCDN-201ENST00000356090 CFAP43Q8NDM7 1665 aa18.19■□□□□ 0.5
NCDN-201ENST00000356090 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
NCDN-201ENST00000356090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.5
NCDN-201ENST00000356090 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
NCDN-201ENST00000356090 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
NCDN-201ENST00000356090 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
NCDN-201ENST00000356090 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
NCDN-201ENST00000356090 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
NCDN-201ENST00000356090 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
NCDN-201ENST00000356090 CNTLNQ9NXG0 1405 aa18.13■□□□□ 0.49
NCDN-201ENST00000356090 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
NCDN-201ENST00000356090 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
NCDN-201ENST00000356090 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
NCDN-201ENST00000356090 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
NCDN-201ENST00000356090 TMC1Q8TDI8 760 aa18.1■□□□□ 0.49
NCDN-201ENST00000356090 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
NCDN-201ENST00000356090 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
NCDN-201ENST00000356090 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
NCDN-201ENST00000356090 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
NCDN-201ENST00000356090 DEKP35659 375 aaKnown RBP18.06■□□□□ 0.48
NCDN-201ENST00000356090 NOP58Q9Y2X3 529 aaKnown RBP18.06■□□□□ 0.48
NCDN-201ENST00000356090 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
NCDN-201ENST00000356090 DNMBPQ6XZF7 1577 aa18.05■□□□□ 0.48
NCDN-201ENST00000356090 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
NCDN-201ENST00000356090 AKNAQ7Z591 1439 aa18.04■□□□□ 0.48
NCDN-201ENST00000356090 FBLN2P98095 1184 aa18.04■□□□□ 0.48
NCDN-201ENST00000356090 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms