RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
SIRPA-201ENST00000356025 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
SIRPA-201ENST00000356025 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
SIRPA-201ENST00000356025 CUX1P39880 1505 aa17.23■□□□□ 0.35
SIRPA-201ENST00000356025 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
SIRPA-201ENST00000356025 ANP32CO43423 234 aa17.21■□□□□ 0.35
SIRPA-201ENST00000356025 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
SIRPA-201ENST00000356025 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
SIRPA-201ENST00000356025 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
SIRPA-201ENST00000356025 FKBP8Q14318 412 aa17.18■□□□□ 0.34
SIRPA-201ENST00000356025 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
SIRPA-201ENST00000356025 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
SIRPA-201ENST00000356025 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
SIRPA-201ENST00000356025 FOXD1Q16676 465 aa17.15■□□□□ 0.34
SIRPA-201ENST00000356025 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
SIRPA-201ENST00000356025 NESP48681 1621 aa17.13■□□□□ 0.33
SIRPA-201ENST00000356025 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
SIRPA-201ENST00000356025 PHLDB1Q86UU1 1377 aa17.12■□□□□ 0.33
SIRPA-201ENST00000356025 CFTRP13569 1480 aa17.11■□□□□ 0.33
SIRPA-201ENST00000356025 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
SIRPA-201ENST00000356025 SETD5Q9C0A6 1442 aa17.1■□□□□ 0.33
SIRPA-201ENST00000356025 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
SIRPA-201ENST00000356025 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.33
SIRPA-201ENST00000356025 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
SIRPA-201ENST00000356025 HNRNPUQ00839 825 aaKnown RBP eCLIP17.05■□□□□ 0.32
SIRPA-201ENST00000356025 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
SIRPA-201ENST00000356025 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
SIRPA-201ENST00000356025 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
SIRPA-201ENST00000356025 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
SIRPA-201ENST00000356025 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
SIRPA-201ENST00000356025 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
SIRPA-201ENST00000356025 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
SIRPA-201ENST00000356025 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
SIRPA-201ENST00000356025 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
SIRPA-201ENST00000356025 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
SIRPA-201ENST00000356025 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
SIRPA-201ENST00000356025 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
SIRPA-201ENST00000356025 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
SIRPA-201ENST00000356025 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
SIRPA-201ENST00000356025 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
SIRPA-201ENST00000356025 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
SIRPA-201ENST00000356025 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.29
SIRPA-201ENST00000356025 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
SIRPA-201ENST00000356025 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
SIRPA-201ENST00000356025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
SIRPA-201ENST00000356025 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
SIRPA-201ENST00000356025 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
SIRPA-201ENST00000356025 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.29
SIRPA-201ENST00000356025 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
SIRPA-201ENST00000356025 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
SIRPA-201ENST00000356025 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.28
SIRPA-201ENST00000356025 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
SIRPA-201ENST00000356025 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
SIRPA-201ENST00000356025 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
SIRPA-201ENST00000356025 TIAM1Q13009 1591 aa16.8■□□□□ 0.28
SIRPA-201ENST00000356025 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SIRPA-201ENST00000356025 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
SIRPA-201ENST00000356025 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
SIRPA-201ENST00000356025 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
SIRPA-201ENST00000356025 FGD6Q6ZV73 1430 aa16.77■□□□□ 0.28
SIRPA-201ENST00000356025 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
SIRPA-201ENST00000356025 ANP32EQ9BTT0 268 aa16.74■□□□□ 0.27
SIRPA-201ENST00000356025 PCF11O94913 1555 aaKnown RBP16.74■□□□□ 0.27
SIRPA-201ENST00000356025 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
SIRPA-201ENST00000356025 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
SIRPA-201ENST00000356025 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
SIRPA-201ENST00000356025 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
SIRPA-201ENST00000356025 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
SIRPA-201ENST00000356025 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
SIRPA-201ENST00000356025 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
SIRPA-201ENST00000356025 PKD2Q13563 968 aa16.68■□□□□ 0.26
SIRPA-201ENST00000356025 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
SIRPA-201ENST00000356025 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
SIRPA-201ENST00000356025 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
SIRPA-201ENST00000356025 PTPRKQ15262 1439 aa16.66■□□□□ 0.26
SIRPA-201ENST00000356025 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
SIRPA-201ENST00000356025 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
SIRPA-201ENST00000356025 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
SIRPA-201ENST00000356025 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
SIRPA-201ENST00000356025 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
SIRPA-201ENST00000356025 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
SIRPA-201ENST00000356025 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
SIRPA-201ENST00000356025 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
SIRPA-201ENST00000356025 HNRNPMP52272 730 aaKnown RBP eCLIP16.62■□□□□ 0.25
SIRPA-201ENST00000356025 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
SIRPA-201ENST00000356025 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
SIRPA-201ENST00000356025 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
SIRPA-201ENST00000356025 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
SIRPA-201ENST00000356025 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
SIRPA-201ENST00000356025 CDK13Q14004 1512 aaKnown RBP16.59■□□□□ 0.25
SIRPA-201ENST00000356025 UACAQ9BZF9 1416 aa16.58■□□□□ 0.25
SIRPA-201ENST00000356025 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.25
SIRPA-201ENST00000356025 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
SIRPA-201ENST00000356025 RBM19Q9Y4C8 960 aaKnown RBP16.58■□□□□ 0.24
SIRPA-201ENST00000356025 NAIPQ13075 1403 aa16.57■□□□□ 0.24
SIRPA-201ENST00000356025 NUP155O75694 1391 aa16.52■□□□□ 0.24
SIRPA-201ENST00000356025 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
SIRPA-201ENST00000356025 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
SIRPA-201ENST00000356025 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
SIRPA-201ENST00000356025 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms