RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 CADPSQ9ULU8 1353 aa10.96□□□□□ -0.66
NUP98-202ENST00000355260 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
NUP98-202ENST00000355260 EFCAB5A4FU69 1503 aa10.95□□□□□ -0.66
NUP98-202ENST00000355260 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.93□□□□□ -0.66
NUP98-202ENST00000355260 FKBP8Q14318 412 aa10.93□□□□□ -0.66
NUP98-202ENST00000355260 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
NUP98-202ENST00000355260 MAP3K1Q13233 1512 aa10.91□□□□□ -0.66
NUP98-202ENST00000355260 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
NUP98-202ENST00000355260 DDX10Q13206 875 aaKnown RBP10.91□□□□□ -0.66
NUP98-202ENST00000355260 TSPY4P0CV99 314 aa10.89□□□□□ -0.67
NUP98-202ENST00000355260 TSPY10P0CW01 314 aa10.89□□□□□ -0.67
NUP98-202ENST00000355260 HNRNPUQ00839 825 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUP98-202ENST00000355260 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
NUP98-202ENST00000355260 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
NUP98-202ENST00000355260 CDCA8Q53HL2 280 aa10.88□□□□□ -0.67
NUP98-202ENST00000355260 ARID4BQ4LE39 1312 aaPredicted RBP10.88□□□□□ -0.67
NUP98-202ENST00000355260 FYCO1Q9BQS8 1478 aa10.86□□□□□ -0.67
NUP98-202ENST00000355260 RAB3GAP2Q9H2M9 1393 aa10.86□□□□□ -0.67
NUP98-202ENST00000355260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.86□□□□□ -0.67
NUP98-202ENST00000355260 DHX57Q6P158 1386 aaKnown RBP10.86□□□□□ -0.67
NUP98-202ENST00000355260 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
NUP98-202ENST00000355260 BIVM-ERCC5R4GMW8 1640 aa10.85□□□□□ -0.67
NUP98-202ENST00000355260 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
NUP98-202ENST00000355260 CFTRP13569 1480 aa10.85□□□□□ -0.67
NUP98-202ENST00000355260 ROCK2O75116 1388 aaKnown RBP10.84□□□□□ -0.67
NUP98-202ENST00000355260 BCANQ96GW7 911 aa10.84□□□□□ -0.67
NUP98-202ENST00000355260 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
NUP98-202ENST00000355260 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
NUP98-202ENST00000355260 NEFMP07197 916 aa10.84□□□□□ -0.67
NUP98-202ENST00000355260 PRXQ9BXM0 1461 aa10.84□□□□□ -0.67
NUP98-202ENST00000355260 MRS2Q9HD23 443 aa10.83□□□□□ -0.68
NUP98-202ENST00000355260 TMC1Q8TDI8 760 aa10.82□□□□□ -0.68
NUP98-202ENST00000355260 PPP4R2Q9NY27 417 aa10.82□□□□□ -0.68
NUP98-202ENST00000355260 PLEKHD1A6NEE1 506 aa10.81□□□□□ -0.68
NUP98-202ENST00000355260 CASKIN1Q8WXD9 1431 aa10.81□□□□□ -0.68
NUP98-202ENST00000355260 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
NUP98-202ENST00000355260 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
NUP98-202ENST00000355260 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
NUP98-202ENST00000355260 CUL7Q14999 1698 aa10.8□□□□□ -0.68
NUP98-202ENST00000355260 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.682e-6■■■■□ 23.2
NUP98-202ENST00000355260 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
NUP98-202ENST00000355260 ANP32EQ9BTT0 268 aa10.79□□□□□ -0.68
NUP98-202ENST00000355260 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
NUP98-202ENST00000355260 UPF2Q9HAU5 1272 aaKnown RBP10.79□□□□□ -0.68
NUP98-202ENST00000355260 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
NUP98-202ENST00000355260 LRRC9Q6ZRR7 1453 aa10.78□□□□□ -0.68
NUP98-202ENST00000355260 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
NUP98-202ENST00000355260 EHBP1L1Q8N3D4 1523 aa10.78□□□□□ -0.68
NUP98-202ENST00000355260 ZNF777Q9ULD5 760 aaPredicted RBP10.78□□□□□ -0.68
NUP98-202ENST00000355260 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
NUP98-202ENST00000355260 RSPH4AQ5TD94 716 aa10.77□□□□□ -0.69
NUP98-202ENST00000355260 CC2D2AQ9P2K1 1620 aa10.77□□□□□ -0.69
NUP98-202ENST00000355260 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.69
NUP98-202ENST00000355260 RUSC2Q8N2Y8 1516 aa10.77□□□□□ -0.69
NUP98-202ENST00000355260 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
NUP98-202ENST00000355260 TIAM1Q13009 1591 aa10.76□□□□□ -0.69
NUP98-202ENST00000355260 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
NUP98-202ENST00000355260 FBLN2P98095 1184 aa10.75□□□□□ -0.69
NUP98-202ENST00000355260 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
NUP98-202ENST00000355260 ARAP1Q96P48 1450 aa10.75□□□□□ -0.69
NUP98-202ENST00000355260 PHLDB1Q86UU1 1377 aa10.75□□□□□ -0.69
NUP98-202ENST00000355260 DNMBPQ6XZF7 1577 aa10.74□□□□□ -0.69
NUP98-202ENST00000355260 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
NUP98-202ENST00000355260 UACAQ9BZF9 1416 aa10.74□□□□□ -0.69
NUP98-202ENST00000355260 BICRAQ9NZM4 1560 aa10.73□□□□□ -0.69
NUP98-202ENST00000355260 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
NUP98-202ENST00000355260 IGF1RP08069 1367 aa10.73□□□□□ -0.69
NUP98-202ENST00000355260 MYOM3Q5VTT5 1437 aa10.72□□□□□ -0.69
NUP98-202ENST00000355260 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
NUP98-202ENST00000355260 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
NUP98-202ENST00000355260 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
NUP98-202ENST00000355260 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
NUP98-202ENST00000355260 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.69
NUP98-202ENST00000355260 FGD6Q6ZV73 1430 aa10.71□□□□□ -0.69
NUP98-202ENST00000355260 RRP7BPQ9NSQ0 103 aa10.71□□□□□ -0.69
NUP98-202ENST00000355260 RALBP1Q15311 655 aa10.71□□□□□ -0.69
NUP98-202ENST00000355260 UNC13AQ9UPW8 1703 aa10.71□□□□□ -0.7
NUP98-202ENST00000355260 KTN1Q86UP2 1357 aaKnown RBP10.71□□□□□ -0.7
NUP98-202ENST00000355260 ERCC6Q03468 1493 aa10.7□□□□□ -0.7
NUP98-202ENST00000355260 KANK1Q14678 1352 aa10.69□□□□□ -0.7
NUP98-202ENST00000355260 FHOD3Q2V2M9 1422 aa10.69□□□□□ -0.7
NUP98-202ENST00000355260 MIA2Q96PC5 1412 aa10.69□□□□□ -0.7
NUP98-202ENST00000355260 MS4A1P11836 297 aa10.69□□□□□ -0.7
NUP98-202ENST00000355260 CHMP4BQ9H444 224 aaKnown RBP10.69□□□□□ -0.7
NUP98-202ENST00000355260 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
NUP98-202ENST00000355260 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
NUP98-202ENST00000355260 BECN1Q14457 450 aa10.68□□□□□ -0.7
NUP98-202ENST00000355260 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
NUP98-202ENST00000355260 NPM1P06748 294 aaKnown RBP eCLIP10.67□□□□□ -0.7
NUP98-202ENST00000355260 EIF3AQ14152 1382 aaKnown RBP10.66□□□□□ -0.7
NUP98-202ENST00000355260 CARD11Q9BXL7 1154 aa10.66□□□□□ -0.7
NUP98-202ENST00000355260 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
NUP98-202ENST00000355260 LAMC3Q9Y6N6 1575 aa10.66□□□□□ -0.7
NUP98-202ENST00000355260 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.7
NUP98-202ENST00000355260 ANP32BQ92688 251 aaKnown RBP10.65□□□□□ -0.71
NUP98-202ENST00000355260 CFAP44Q96MT7 982 aa10.65□□□□□ -0.71
NUP98-202ENST00000355260 PRDM2Q13029 1718 aa10.65□□□□□ -0.71
NUP98-202ENST00000355260 CFAP53Q96M91 514 aa10.64□□□□□ -0.71
NUP98-202ENST00000355260 SIN3AQ96ST3 1273 aa10.64□□□□□ -0.71
NUP98-202ENST00000355260 TMF1P82094 1093 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms