RNA–Protein interactions for RNA: ENST00000352591.9

CEACAM1-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 3,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-203ENST00000352591 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
CEACAM1-203ENST00000352591 KANK4Q5T7N3 995 aaPredicted RBP9.78□□□□□ -0.84
CEACAM1-203ENST00000352591 ARID3CA6NKF2 412 aa9.77□□□□□ -0.84
CEACAM1-203ENST00000352591 NEUROD1Q13562 356 aa9.77□□□□□ -0.85
CEACAM1-203ENST00000352591 TDRD9Q8NDG6 1382 aaKnown RBP9.76□□□□□ -0.85
CEACAM1-203ENST00000352591 GAPVD1Q14C86 1478 aa9.76□□□□□ -0.85
CEACAM1-203ENST00000352591 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
CEACAM1-203ENST00000352591 TIAM1Q13009 1591 aa9.75□□□□□ -0.85
CEACAM1-203ENST00000352591 MRC2Q9UBG0 1479 aa9.74□□□□□ -0.85
CEACAM1-203ENST00000352591 PBRM1Q86U86 1689 aa9.74□□□□□ -0.85
CEACAM1-203ENST00000352591 EFCAB5A4FU69 1503 aa9.74□□□□□ -0.85
CEACAM1-203ENST00000352591 CFAP43Q8NDM7 1665 aa9.73□□□□□ -0.85
CEACAM1-203ENST00000352591 MAP3K1Q13233 1512 aa9.73□□□□□ -0.85
CEACAM1-203ENST00000352591 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
CEACAM1-203ENST00000352591 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
CEACAM1-203ENST00000352591 FHOD3Q2V2M9 1422 aa9.72□□□□□ -0.85
CEACAM1-203ENST00000352591 FAM50AQ14320 339 aaKnown RBP9.71□□□□□ -0.86
CEACAM1-203ENST00000352591 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
CEACAM1-203ENST00000352591 SAMD9Q5K651 1589 aa9.7□□□□□ -0.86
CEACAM1-203ENST00000352591 WDR62O43379 1518 aa9.7□□□□□ -0.86
CEACAM1-203ENST00000352591 LRRC9Q6ZRR7 1453 aa9.69□□□□□ -0.86
CEACAM1-203ENST00000352591 HIRIP3Q9BW71 556 aaPredicted RBP9.69□□□□□ -0.86
CEACAM1-203ENST00000352591 ADAMTS12P58397 1594 aa9.68□□□□□ -0.86
CEACAM1-203ENST00000352591 MIER1Q8N108 512 aa9.68□□□□□ -0.86
CEACAM1-203ENST00000352591 FYCO1Q9BQS8 1478 aa9.68□□□□□ -0.86
CEACAM1-203ENST00000352591 AQRO60306 1485 aaKnown RBP eCLIP9.67□□□□□ -0.868e-7■■□□□ 12.2
CEACAM1-203ENST00000352591 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
CEACAM1-203ENST00000352591 SNAPC4Q5SXM2 1469 aa9.66□□□□□ -0.86
CEACAM1-203ENST00000352591 CASKIN1Q8WXD9 1431 aa9.66□□□□□ -0.86
CEACAM1-203ENST00000352591 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
CEACAM1-203ENST00000352591 CCNB3Q8WWL7 1395 aa9.66□□□□□ -0.86
CEACAM1-203ENST00000352591 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
CEACAM1-203ENST00000352591 CENPBP07199 599 aaPredicted RBP9.65□□□□□ -0.86
CEACAM1-203ENST00000352591 CNGB1Q14028 1251 aaPredicted RBP9.65□□□□□ -0.87
CEACAM1-203ENST00000352591 THOC2Q8NI27 1593 aaKnown RBP9.65□□□□□ -0.87
CEACAM1-203ENST00000352591 IFT140Q96RY7 1462 aa9.64□□□□□ -0.87
CEACAM1-203ENST00000352591 ACIN1Q9UKV3 1341 aaKnown RBP9.64□□□□□ -0.87
CEACAM1-203ENST00000352591 PHLDB1Q86UU1 1377 aa9.64□□□□□ -0.87
CEACAM1-203ENST00000352591 GRIN2BQ13224 1484 aa9.63□□□□□ -0.87
CEACAM1-203ENST00000352591 FMN1Q68DA7 1419 aa9.63□□□□□ -0.87
CEACAM1-203ENST00000352591 EIF4G3O43432 1585 aaKnown RBP9.62□□□□□ -0.87
CEACAM1-203ENST00000352591 IQGAP2Q13576 1575 aa9.61□□□□□ -0.87
CEACAM1-203ENST00000352591 ERCC6Q03468 1493 aa9.6□□□□□ -0.87
CEACAM1-203ENST00000352591 DHX57Q6P158 1386 aaKnown RBP9.6□□□□□ -0.87
CEACAM1-203ENST00000352591 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
CEACAM1-203ENST00000352591 SIN3AQ96ST3 1273 aa9.55□□□□□ -0.88
CEACAM1-203ENST00000352591 MAGI3Q5TCQ9 1506 aa9.55□□□□□ -0.88
CEACAM1-203ENST00000352591 GRIN2AQ12879 1464 aa9.54□□□□□ -0.88
CEACAM1-203ENST00000352591 HECW1Q76N89 1606 aa9.54□□□□□ -0.88
CEACAM1-203ENST00000352591 CLSPNQ9HAW4 1339 aa9.54□□□□□ -0.88
CEACAM1-203ENST00000352591 RAB3GAP2Q9H2M9 1393 aa9.54□□□□□ -0.88
CEACAM1-203ENST00000352591 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
CEACAM1-203ENST00000352591 BCANQ96GW7 911 aa9.53□□□□□ -0.88
CEACAM1-203ENST00000352591 KIAA0556O60303 1618 aa9.53□□□□□ -0.88
CEACAM1-203ENST00000352591 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
CEACAM1-203ENST00000352591 CHIC2Q9UKJ5 165 aa9.53□□□□□ -0.88
CEACAM1-203ENST00000352591 FGD6Q6ZV73 1430 aa9.53□□□□□ -0.88
CEACAM1-203ENST00000352591 KIAA0586Q9BVV6 1533 aa9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 MTUS2Q5JR59 1369 aa9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 ARHGEF11O15085 1522 aa9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 DISP1Q96F81 1524 aa9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 NCOA2Q15596 1464 aa9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 CCDC18Q5T9S5 1454 aa9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 MAGI1Q96QZ7 1491 aaPredicted RBP9.52□□□□□ -0.89
CEACAM1-203ENST00000352591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.51□□□□□ -0.89
CEACAM1-203ENST00000352591 CEP170Q5SW79 1584 aa9.51□□□□□ -0.89
CEACAM1-203ENST00000352591 MAPKBP1O60336 1514 aa9.51□□□□□ -0.89
CEACAM1-203ENST00000352591 SETD5Q9C0A6 1442 aa9.51□□□□□ -0.89
CEACAM1-203ENST00000352591 FBLN2P98095 1184 aa9.51□□□□□ -0.89
CEACAM1-203ENST00000352591 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
CEACAM1-203ENST00000352591 EPRSP07814 1512 aaKnown RBP9.5□□□□□ -0.89
CEACAM1-203ENST00000352591 CDK13Q14004 1512 aaKnown RBP9.5□□□□□ -0.89
CEACAM1-203ENST00000352591 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
CEACAM1-203ENST00000352591 DDX10Q13206 875 aaKnown RBP9.49□□□□□ -0.89
CEACAM1-203ENST00000352591 MYOM3Q5VTT5 1437 aa9.49□□□□□ -0.89
CEACAM1-203ENST00000352591 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
CEACAM1-203ENST00000352591 PTPN23Q9H3S7 1636 aa9.47□□□□□ -0.89
CEACAM1-203ENST00000352591 PTPRKQ15262 1439 aa9.47□□□□□ -0.89
CEACAM1-203ENST00000352591 POLR3GLQ9BT43 218 aa9.46□□□□□ -0.89
CEACAM1-203ENST00000352591 RAPGEF6Q8TEU7 1601 aa9.46□□□□□ -0.9
CEACAM1-203ENST00000352591 NUP160Q12769 1436 aa9.45□□□□□ -0.9
CEACAM1-203ENST00000352591 NUP153P49790 1475 aaKnown RBP9.45□□□□□ -0.9
CEACAM1-203ENST00000352591 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
CEACAM1-203ENST00000352591 TCOF1Q13428 1488 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-203ENST00000352591 RRP7BPQ9NSQ0 103 aa9.43□□□□□ -0.9
CEACAM1-203ENST00000352591 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
CEACAM1-203ENST00000352591 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
CEACAM1-203ENST00000352591 FOXD1Q16676 465 aa9.4□□□□□ -0.9
CEACAM1-203ENST00000352591 GCC2Q8IWJ2 1684 aa9.4□□□□□ -0.9
CEACAM1-203ENST00000352591 NAIPQ13075 1403 aa9.4□□□□□ -0.9
CEACAM1-203ENST00000352591 ZNF326Q5BKZ1 582 aaKnown RBP9.4□□□□□ -0.91
CEACAM1-203ENST00000352591 PLB1Q6P1J6 1458 aa9.4□□□□□ -0.91
CEACAM1-203ENST00000352591 ZNF777Q9ULD5 760 aaPredicted RBP9.39□□□□□ -0.91
CEACAM1-203ENST00000352591 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
CEACAM1-203ENST00000352591 CHD1O14646 1710 aa9.38□□□□□ -0.91
CEACAM1-203ENST00000352591 KDM6BO15054 1643 aa9.37□□□□□ -0.91
CEACAM1-203ENST00000352591 ADCY10Q96PN6 1610 aa9.36□□□□□ -0.91
CEACAM1-203ENST00000352591 UACAQ9BZF9 1416 aa9.36□□□□□ -0.91
CEACAM1-203ENST00000352591 KIF14Q15058 1648 aa9.36□□□□□ -0.91
CEACAM1-203ENST00000352591 JPH4Q96JJ6 628 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms