RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 PRDM2Q13029 1718 aa11.3□□□□□ -0.6
PDE1A-201ENST00000351439 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
PDE1A-201ENST00000351439 IGF1RP08069 1367 aa11.27□□□□□ -0.6
PDE1A-201ENST00000351439 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.6
PDE1A-201ENST00000351439 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.61
PDE1A-201ENST00000351439 TIAM1Q13009 1591 aa11.27□□□□□ -0.61
PDE1A-201ENST00000351439 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
PDE1A-201ENST00000351439 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
PDE1A-201ENST00000351439 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
PDE1A-201ENST00000351439 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
PDE1A-201ENST00000351439 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
PDE1A-201ENST00000351439 FGD5Q6ZNL6 1462 aa11.22□□□□□ -0.61
PDE1A-201ENST00000351439 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
PDE1A-201ENST00000351439 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.61
PDE1A-201ENST00000351439 PHLDB1Q86UU1 1377 aa11.21□□□□□ -0.61
PDE1A-201ENST00000351439 MAP3K1Q13233 1512 aa11.21□□□□□ -0.61
PDE1A-201ENST00000351439 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
PDE1A-201ENST00000351439 SETD5Q9C0A6 1442 aa11.2□□□□□ -0.62
PDE1A-201ENST00000351439 FAM50AQ14320 339 aaKnown RBP11.2□□□□□ -0.62
PDE1A-201ENST00000351439 SIN3AQ96ST3 1273 aa11.19□□□□□ -0.62
PDE1A-201ENST00000351439 MSH5O43196 834 aa11.19□□□□□ -0.62
PDE1A-201ENST00000351439 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
PDE1A-201ENST00000351439 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
PDE1A-201ENST00000351439 WDR97A6NE52 1622 aa11.18□□□□□ -0.62
PDE1A-201ENST00000351439 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
PDE1A-201ENST00000351439 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
PDE1A-201ENST00000351439 DEKP35659 375 aaKnown RBP11.15□□□□□ -0.62
PDE1A-201ENST00000351439 ERCC6Q03468 1493 aa11.15□□□□□ -0.62
PDE1A-201ENST00000351439 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
PDE1A-201ENST00000351439 FHAD1B1AJZ9 1412 aa11.15□□□□□ -0.62
PDE1A-201ENST00000351439 FHOD3Q2V2M9 1422 aa11.13□□□□□ -0.63
PDE1A-201ENST00000351439 HIRIP3Q9BW71 556 aaPredicted RBP11.13□□□□□ -0.63
PDE1A-201ENST00000351439 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
PDE1A-201ENST00000351439 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
PDE1A-201ENST00000351439 FKBP8Q14318 412 aa11.09□□□□□ -0.63
PDE1A-201ENST00000351439 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
PDE1A-201ENST00000351439 FYCO1Q9BQS8 1478 aa11.08□□□□□ -0.64
PDE1A-201ENST00000351439 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
PDE1A-201ENST00000351439 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
PDE1A-201ENST00000351439 BCANQ96GW7 911 aa11.07□□□□□ -0.64
PDE1A-201ENST00000351439 CASKIN1Q8WXD9 1431 aa11.06□□□□□ -0.64
PDE1A-201ENST00000351439 NEFLP07196 543 aa11.06□□□□□ -0.64
PDE1A-201ENST00000351439 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
PDE1A-201ENST00000351439 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
PDE1A-201ENST00000351439 EFCAB5A4FU69 1503 aa11.05□□□□□ -0.64
PDE1A-201ENST00000351439 ABCA10Q8WWZ4 1543 aa11.05□□□□□ -0.64
PDE1A-201ENST00000351439 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
PDE1A-201ENST00000351439 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
PDE1A-201ENST00000351439 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
PDE1A-201ENST00000351439 CUL7Q14999 1698 aa11.03□□□□□ -0.64
PDE1A-201ENST00000351439 NESP48681 1621 aa11.03□□□□□ -0.64
PDE1A-201ENST00000351439 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDE1A-201ENST00000351439 FGD6Q6ZV73 1430 aa11.03□□□□□ -0.64
PDE1A-201ENST00000351439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.64
PDE1A-201ENST00000351439 TRIM52Q96A61 297 aa11.02□□□□□ -0.64
PDE1A-201ENST00000351439 CCDC18Q5T9S5 1454 aa11.01□□□□□ -0.65
PDE1A-201ENST00000351439 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
PDE1A-201ENST00000351439 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
PDE1A-201ENST00000351439 ANP32CO43423 234 aa11□□□□□ -0.65
PDE1A-201ENST00000351439 FMN1Q68DA7 1419 aa11□□□□□ -0.65
PDE1A-201ENST00000351439 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
PDE1A-201ENST00000351439 TONSLQ96HA7 1378 aa11□□□□□ -0.65
PDE1A-201ENST00000351439 EIF5BO60841 1220 aaKnown RBP10.99□□□□□ -0.65
PDE1A-201ENST00000351439 PTPN23Q9H3S7 1636 aa10.99□□□□□ -0.65
PDE1A-201ENST00000351439 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
PDE1A-201ENST00000351439 CDK11AQ9UQ88 783 aaPredicted RBP10.97□□□□□ -0.65
PDE1A-201ENST00000351439 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
PDE1A-201ENST00000351439 UACAQ9BZF9 1416 aa10.97□□□□□ -0.65
PDE1A-201ENST00000351439 SAMD9Q5K651 1589 aa10.96□□□□□ -0.65
PDE1A-201ENST00000351439 LAMC3Q9Y6N6 1575 aa10.96□□□□□ -0.65
PDE1A-201ENST00000351439 TDRD9Q8NDG6 1382 aaKnown RBP10.96□□□□□ -0.66
PDE1A-201ENST00000351439 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
PDE1A-201ENST00000351439 NAIPQ13075 1403 aa10.95□□□□□ -0.66
PDE1A-201ENST00000351439 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
PDE1A-201ENST00000351439 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
PDE1A-201ENST00000351439 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
PDE1A-201ENST00000351439 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
PDE1A-201ENST00000351439 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
PDE1A-201ENST00000351439 ABCA5Q8WWZ7 1642 aa10.93□□□□□ -0.66
PDE1A-201ENST00000351439 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
PDE1A-201ENST00000351439 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
PDE1A-201ENST00000351439 KDM5BQ9UGL1 1544 aa10.92□□□□□ -0.66
PDE1A-201ENST00000351439 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
PDE1A-201ENST00000351439 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
PDE1A-201ENST00000351439 MAGI3Q5TCQ9 1506 aa10.91□□□□□ -0.66
PDE1A-201ENST00000351439 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
PDE1A-201ENST00000351439 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
PDE1A-201ENST00000351439 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
PDE1A-201ENST00000351439 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
PDE1A-201ENST00000351439 PKNOX2Q96KN3 472 aa10.88□□□□□ -0.67
PDE1A-201ENST00000351439 KDM6BO15054 1643 aa10.88□□□□□ -0.67
PDE1A-201ENST00000351439 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
PDE1A-201ENST00000351439 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
PDE1A-201ENST00000351439 ARHGEF11O15085 1522 aa10.87□□□□□ -0.67
PDE1A-201ENST00000351439 GCC2Q8IWJ2 1684 aa10.87□□□□□ -0.67
PDE1A-201ENST00000351439 WASHC2AQ641Q2 1341 aa10.87□□□□□ -0.67
PDE1A-201ENST00000351439 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDE1A-201ENST00000351439 HSPA5P11021 654 aaKnown RBP10.86□□□□□ -0.67
PDE1A-201ENST00000351439 KIF21AQ7Z4S6 1674 aa10.86□□□□□ -0.67
PDE1A-201ENST00000351439 HECW1Q76N89 1606 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms