RNA–Protein interactions for RNA: ENST00000348462.5

RPL35-201, Transcript of ribosomal protein L35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-201ENST00000348462 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
RPL35-201ENST00000348462 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
RPL35-201ENST00000348462 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
RPL35-201ENST00000348462 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
RPL35-201ENST00000348462 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
RPL35-201ENST00000348462 KIF21BO75037 1637 aa24.25■■□□□ 1.47
RPL35-201ENST00000348462 IQGAP2Q13576 1575 aa24.24■■□□□ 1.47
RPL35-201ENST00000348462 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
RPL35-201ENST00000348462 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
RPL35-201ENST00000348462 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
RPL35-201ENST00000348462 PRG4Q92954 1404 aaPredicted RBP24.17■■□□□ 1.46
RPL35-201ENST00000348462 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
RPL35-201ENST00000348462 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
RPL35-201ENST00000348462 UGGT2Q9NYU1 1516 aa24.1■■□□□ 1.45
RPL35-201ENST00000348462 CARMIL2Q6F5E8 1435 aa24.04■■□□□ 1.44
RPL35-201ENST00000348462 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
RPL35-201ENST00000348462 CYB5RLQ6IPT4 315 aa24.02■■□□□ 1.44
RPL35-201ENST00000348462 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.44
RPL35-201ENST00000348462 KIAA0556O60303 1618 aa24.01■■□□□ 1.43
RPL35-201ENST00000348462 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
RPL35-201ENST00000348462 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
RPL35-201ENST00000348462 SAMD9Q5K651 1589 aa23.92■■□□□ 1.42
RPL35-201ENST00000348462 PTPRGP23470 1445 aa23.89■■□□□ 1.41
RPL35-201ENST00000348462 EFCAB5A4FU69 1503 aa23.86■■□□□ 1.41
RPL35-201ENST00000348462 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
RPL35-201ENST00000348462 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
RPL35-201ENST00000348462 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
RPL35-201ENST00000348462 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
RPL35-201ENST00000348462 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
RPL35-201ENST00000348462 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
RPL35-201ENST00000348462 ABCC2Q92887 1545 aa23.74■■□□□ 1.39
RPL35-201ENST00000348462 UHRF1BP1LA0JNW5 1464 aa23.74■■□□□ 1.39
RPL35-201ENST00000348462 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
RPL35-201ENST00000348462 ABCA8O94911 1581 aa23.71■■□□□ 1.39
RPL35-201ENST00000348462 PLB1Q6P1J6 1458 aa23.71■■□□□ 1.39
RPL35-201ENST00000348462 CLIP1P30622 1438 aa23.67■■□□□ 1.38
RPL35-201ENST00000348462 LOC105371045A0A1W2PR82 267 aa23.66■■□□□ 1.38
RPL35-201ENST00000348462 NPM1P06748 294 aaKnown RBP eCLIP23.65■■□□□ 1.38
RPL35-201ENST00000348462 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
RPL35-201ENST00000348462 CEP162Q5TB80 1403 aa23.62■■□□□ 1.37
RPL35-201ENST00000348462 MAPKBP1O60336 1514 aa23.61■■□□□ 1.37
RPL35-201ENST00000348462 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
RPL35-201ENST00000348462 FMN1Q68DA7 1419 aa23.6■■□□□ 1.37
RPL35-201ENST00000348462 ZCCHC11Q5TAX3 1644 aaKnown RBP23.6■■□□□ 1.37
RPL35-201ENST00000348462 NUP153P49790 1475 aaKnown RBP23.54■■□□□ 1.36
RPL35-201ENST00000348462 HECW1Q76N89 1606 aa23.51■■□□□ 1.35
RPL35-201ENST00000348462 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
RPL35-201ENST00000348462 PCF11O94913 1555 aaKnown RBP23.49■■□□□ 1.35
RPL35-201ENST00000348462 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
RPL35-201ENST00000348462 ATP10BO94823 1461 aa23.48■■□□□ 1.35
RPL35-201ENST00000348462 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
RPL35-201ENST00000348462 DIP2BQ9P265 1576 aa23.45■■□□□ 1.34
RPL35-201ENST00000348462 ABCC10Q5T3U5 1492 aa23.45■■□□□ 1.34
RPL35-201ENST00000348462 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
RPL35-201ENST00000348462 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
RPL35-201ENST00000348462 KIF13AQ9H1H9 1805 aa23.43■■□□□ 1.34
RPL35-201ENST00000348462 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
RPL35-201ENST00000348462 EPRSP07814 1512 aaKnown RBP23.4■■□□□ 1.34
RPL35-201ENST00000348462 CDK13Q14004 1512 aaKnown RBP23.4■■□□□ 1.34
RPL35-201ENST00000348462 ATP1B4Q9UN42 357 aaPredicted RBP23.4■■□□□ 1.34
RPL35-201ENST00000348462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.33
RPL35-201ENST00000348462 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.33
RPL35-201ENST00000348462 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
RPL35-201ENST00000348462 FAM69CQ0P6D2 419 aa23.36■■□□□ 1.33
RPL35-201ENST00000348462 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
RPL35-201ENST00000348462 GLI2P10070 1586 aa23.35■■□□□ 1.33
RPL35-201ENST00000348462 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.32
RPL35-201ENST00000348462 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
RPL35-201ENST00000348462 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
RPL35-201ENST00000348462 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
RPL35-201ENST00000348462 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
RPL35-201ENST00000348462 CFAP43Q8NDM7 1665 aa23.25■■□□□ 1.31
RPL35-201ENST00000348462 TSPOAP1O95153 1857 aa23.23■■□□□ 1.31
RPL35-201ENST00000348462 ABCA9Q8IUA7 1624 aa23.22■■□□□ 1.31
RPL35-201ENST00000348462 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
RPL35-201ENST00000348462 PPRC1Q5VV67 1664 aaKnown RBP23.19■■□□□ 1.3
RPL35-201ENST00000348462 KIF14Q15058 1648 aa23.19■■□□□ 1.3
RPL35-201ENST00000348462 MAGI3Q5TCQ9 1506 aa23.18■■□□□ 1.3
RPL35-201ENST00000348462 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
RPL35-201ENST00000348462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.31e-50■□□□□ 8.5
RPL35-201ENST00000348462 TTC37Q6PGP7 1564 aa23.15■■□□□ 1.3
RPL35-201ENST00000348462 TIAM1Q13009 1591 aa23.14■■□□□ 1.3
RPL35-201ENST00000348462 TEX14Q8IWB6 1497 aa23.14■■□□□ 1.29
RPL35-201ENST00000348462 EHBP1L1Q8N3D4 1523 aa23.12■■□□□ 1.29
RPL35-201ENST00000348462 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
RPL35-201ENST00000348462 MAP3K1Q13233 1512 aa23.09■■□□□ 1.29
RPL35-201ENST00000348462 MYO5CQ9NQX4 1742 aa23.06■■□□□ 1.28
RPL35-201ENST00000348462 KDM6BO15054 1643 aa23.03■■□□□ 1.28
RPL35-201ENST00000348462 CFAP74Q9C0B2 1584 aa23.02■■□□□ 1.28
RPL35-201ENST00000348462 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
RPL35-201ENST00000348462 APLP2Q06481 763 aa23.01■■□□□ 1.27
RPL35-201ENST00000348462 NEO1Q92859 1461 aa23■■□□□ 1.27
RPL35-201ENST00000348462 ARAP3Q8WWN8 1544 aa23■■□□□ 1.27
RPL35-201ENST00000348462 PLCH2O75038 1416 aa22.99■■□□□ 1.27
RPL35-201ENST00000348462 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
RPL35-201ENST00000348462 PREX2Q70Z35 1606 aa22.99■■□□□ 1.27
RPL35-201ENST00000348462 FANCAO15360 1455 aa22.98■■□□□ 1.27
RPL35-201ENST00000348462 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
RPL35-201ENST00000348462 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
RPL35-201ENST00000348462 PHLDB1Q86UU1 1377 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms