RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 RRP7BPQ9NSQ0 103 aa12.5□□□□□ -0.41
SKAP2-201ENST00000345317 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
SKAP2-201ENST00000345317 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
SKAP2-201ENST00000345317 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
SKAP2-201ENST00000345317 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
SKAP2-201ENST00000345317 KCNH8Q96L42 1107 aa12.46□□□□□ -0.42
SKAP2-201ENST00000345317 TOP2BQ02880 1626 aa12.45□□□□□ -0.42
SKAP2-201ENST00000345317 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
SKAP2-201ENST00000345317 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
SKAP2-201ENST00000345317 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
SKAP2-201ENST00000345317 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
SKAP2-201ENST00000345317 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
SKAP2-201ENST00000345317 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
SKAP2-201ENST00000345317 SIN3AQ96ST3 1273 aa12.39□□□□□ -0.43
SKAP2-201ENST00000345317 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
SKAP2-201ENST00000345317 FHAD1B1AJZ9 1412 aa12.38□□□□□ -0.43
SKAP2-201ENST00000345317 KIF21BO75037 1637 aa12.37□□□□□ -0.43
SKAP2-201ENST00000345317 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
SKAP2-201ENST00000345317 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
SKAP2-201ENST00000345317 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
SKAP2-201ENST00000345317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.35□□□□□ -0.43
SKAP2-201ENST00000345317 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
SKAP2-201ENST00000345317 JPH4Q96JJ6 628 aa12.33□□□□□ -0.44
SKAP2-201ENST00000345317 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
SKAP2-201ENST00000345317 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
SKAP2-201ENST00000345317 TONSLQ96HA7 1378 aa12.29□□□□□ -0.44
SKAP2-201ENST00000345317 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
SKAP2-201ENST00000345317 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
SKAP2-201ENST00000345317 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
SKAP2-201ENST00000345317 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
SKAP2-201ENST00000345317 FOXD1Q16676 465 aa12.28□□□□□ -0.44
SKAP2-201ENST00000345317 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.44
SKAP2-201ENST00000345317 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
SKAP2-201ENST00000345317 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
SKAP2-201ENST00000345317 MIER1Q8N108 512 aa12.25□□□□□ -0.45
SKAP2-201ENST00000345317 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
SKAP2-201ENST00000345317 ERICH3Q5RHP9 1530 aa12.24□□□□□ -0.45
SKAP2-201ENST00000345317 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
SKAP2-201ENST00000345317 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
SKAP2-201ENST00000345317 SENP3Q9H4L4 574 aaPredicted RBP12.23□□□□□ -0.45
SKAP2-201ENST00000345317 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
SKAP2-201ENST00000345317 PHLDB1Q86UU1 1377 aa12.22□□□□□ -0.45
SKAP2-201ENST00000345317 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
SKAP2-201ENST00000345317 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
SKAP2-201ENST00000345317 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.45
SKAP2-201ENST00000345317 ZNF644Q9H582 1327 aaPredicted RBP12.19□□□□□ -0.46
SKAP2-201ENST00000345317 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
SKAP2-201ENST00000345317 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
SKAP2-201ENST00000345317 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
SKAP2-201ENST00000345317 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
SKAP2-201ENST00000345317 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
SKAP2-201ENST00000345317 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
SKAP2-201ENST00000345317 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
SKAP2-201ENST00000345317 ANP32CO43423 234 aa12.15□□□□□ -0.46
SKAP2-201ENST00000345317 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
SKAP2-201ENST00000345317 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
SKAP2-201ENST00000345317 DHX57Q6P158 1386 aaKnown RBP12.14□□□□□ -0.47
SKAP2-201ENST00000345317 IFT140Q96RY7 1462 aa12.12□□□□□ -0.47
SKAP2-201ENST00000345317 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
SKAP2-201ENST00000345317 PTPRGP23470 1445 aa12.1□□□□□ -0.47
SKAP2-201ENST00000345317 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
SKAP2-201ENST00000345317 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
SKAP2-201ENST00000345317 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
SKAP2-201ENST00000345317 NEFLP07196 543 aa12.07□□□□□ -0.48
SKAP2-201ENST00000345317 MPHOSPH9Q99550 1183 aa12.07□□□□□ -0.48
SKAP2-201ENST00000345317 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
SKAP2-201ENST00000345317 BCANQ96GW7 911 aa12.07□□□□□ -0.48
SKAP2-201ENST00000345317 PKD2Q13563 968 aa12.05□□□□□ -0.48
SKAP2-201ENST00000345317 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
SKAP2-201ENST00000345317 NCOA2Q15596 1464 aa12.04□□□□□ -0.48
SKAP2-201ENST00000345317 CCDC18Q5T9S5 1454 aa12.04□□□□□ -0.48
SKAP2-201ENST00000345317 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
SKAP2-201ENST00000345317 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
SKAP2-201ENST00000345317 PCF11O94913 1555 aaKnown RBP12.03□□□□□ -0.48
SKAP2-201ENST00000345317 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
SKAP2-201ENST00000345317 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
SKAP2-201ENST00000345317 TIAM1Q13009 1591 aa12.02□□□□□ -0.48
SKAP2-201ENST00000345317 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
SKAP2-201ENST00000345317 CYB5RLQ6IPT4 315 aa12.01□□□□□ -0.49
SKAP2-201ENST00000345317 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
SKAP2-201ENST00000345317 RRBP1Q9P2E9 1410 aaKnown RBP12.01□□□□□ -0.49
SKAP2-201ENST00000345317 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SKAP2-201ENST00000345317 NUP155O75694 1391 aa12□□□□□ -0.49
SKAP2-201ENST00000345317 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
SKAP2-201ENST00000345317 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
SKAP2-201ENST00000345317 PLB1Q6P1J6 1458 aa11.99□□□□□ -0.49
SKAP2-201ENST00000345317 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
SKAP2-201ENST00000345317 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
SKAP2-201ENST00000345317 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
SKAP2-201ENST00000345317 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
SKAP2-201ENST00000345317 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
SKAP2-201ENST00000345317 CUL7Q14999 1698 aa11.97□□□□□ -0.49
SKAP2-201ENST00000345317 IQGAP2Q13576 1575 aa11.97□□□□□ -0.49
SKAP2-201ENST00000345317 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
SKAP2-201ENST00000345317 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
SKAP2-201ENST00000345317 GGT6Q6P531 493 aa11.96□□□□□ -0.49
SKAP2-201ENST00000345317 CARD11Q9BXL7 1154 aa11.95□□□□□ -0.5
SKAP2-201ENST00000345317 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
SKAP2-201ENST00000345317 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
SKAP2-201ENST00000345317 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms