RNA–Protein interactions for RNA: ENST00000344493.8

PAX3-203, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-203ENST00000344493 CUX2O14529 1486 aa20.34■□□□□ 0.85
PAX3-203ENST00000344493 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.84
PAX3-203ENST00000344493 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
PAX3-203ENST00000344493 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
PAX3-203ENST00000344493 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
PAX3-203ENST00000344493 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
PAX3-203ENST00000344493 NOP58Q9Y2X3 529 aaKnown RBP20.23■□□□□ 0.83
PAX3-203ENST00000344493 B4GALNT3Q6L9W6 998 aa20.22■□□□□ 0.83
PAX3-203ENST00000344493 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
PAX3-203ENST00000344493 SETD5Q9C0A6 1442 aa20.17■□□□□ 0.82
PAX3-203ENST00000344493 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
PAX3-203ENST00000344493 ERICH6BQ5W0A0 696 aa20.11■□□□□ 0.81
PAX3-203ENST00000344493 IL27Q8NEV9 243 aa20.11■□□□□ 0.81
PAX3-203ENST00000344493 RTN4Q9NQC3 1192 aaKnown RBP20.11■□□□□ 0.81
PAX3-203ENST00000344493 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
PAX3-203ENST00000344493 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
PAX3-203ENST00000344493 RTL5Q5HYW3 569 aaPredicted RBP20.06■□□□□ 0.8
PAX3-203ENST00000344493 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
PAX3-203ENST00000344493 CCDC184Q52MB2 194 aa20.02■□□□□ 0.79
PAX3-203ENST00000344493 ZBTB4Q9P1Z0 1013 aaPredicted RBP20■□□□□ 0.79
PAX3-203ENST00000344493 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
PAX3-203ENST00000344493 TONSLQ96HA7 1378 aa19.98■□□□□ 0.79
PAX3-203ENST00000344493 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
PAX3-203ENST00000344493 IPO9Q96P70 1041 aaKnown RBP19.97■□□□□ 0.79
PAX3-203ENST00000344493 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
PAX3-203ENST00000344493 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
PAX3-203ENST00000344493 ARHGAP35Q9NRY4 1499 aa19.97■□□□□ 0.79
PAX3-203ENST00000344493 PHLDB1Q86UU1 1377 aa19.95■□□□□ 0.78
PAX3-203ENST00000344493 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
PAX3-203ENST00000344493 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
PAX3-203ENST00000344493 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
PAX3-203ENST00000344493 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
PAX3-203ENST00000344493 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
PAX3-203ENST00000344493 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
PAX3-203ENST00000344493 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
PAX3-203ENST00000344493 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
PAX3-203ENST00000344493 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
PAX3-203ENST00000344493 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
PAX3-203ENST00000344493 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
PAX3-203ENST00000344493 NEFMP07197 916 aa19.78■□□□□ 0.76
PAX3-203ENST00000344493 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
PAX3-203ENST00000344493 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
PAX3-203ENST00000344493 UBE2Q2Q8WVN8 375 aa19.77■□□□□ 0.76
PAX3-203ENST00000344493 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
PAX3-203ENST00000344493 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
PAX3-203ENST00000344493 SENP3-EIF4A1A0A087X0R7 540 aa19.75■□□□□ 0.75
PAX3-203ENST00000344493 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
PAX3-203ENST00000344493 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
PAX3-203ENST00000344493 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
PAX3-203ENST00000344493 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
PAX3-203ENST00000344493 MAP3K1Q13233 1512 aa19.71■□□□□ 0.75
PAX3-203ENST00000344493 EIF4G2P78344 907 aaKnown RBP eCLIP19.7■□□□□ 0.74
PAX3-203ENST00000344493 EIF5BO60841 1220 aaKnown RBP19.7■□□□□ 0.74
PAX3-203ENST00000344493 CNTLNQ9NXG0 1405 aa19.7■□□□□ 0.74
PAX3-203ENST00000344493 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
PAX3-203ENST00000344493 BRPF3Q9ULD4 1205 aa19.69■□□□□ 0.74
PAX3-203ENST00000344493 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
PAX3-203ENST00000344493 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
PAX3-203ENST00000344493 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
PAX3-203ENST00000344493 WASHC2CQ9Y4E1 1318 aa19.64■□□□□ 0.73
PAX3-203ENST00000344493 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
PAX3-203ENST00000344493 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
PAX3-203ENST00000344493 UACAQ9BZF9 1416 aa19.64■□□□□ 0.73
PAX3-203ENST00000344493 KDM5BQ9UGL1 1544 aa19.63■□□□□ 0.73
PAX3-203ENST00000344493 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
PAX3-203ENST00000344493 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
PAX3-203ENST00000344493 CUX1P39880 1505 aa19.6■□□□□ 0.73
PAX3-203ENST00000344493 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
PAX3-203ENST00000344493 RNF123Q5XPI4 1314 aa19.59■□□□□ 0.73
PAX3-203ENST00000344493 CCDC7Q96M83 1385 aa19.59■□□□□ 0.73
PAX3-203ENST00000344493 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
PAX3-203ENST00000344493 PTPRKQ15262 1439 aa19.58■□□□□ 0.72
PAX3-203ENST00000344493 PDE4AP27815 886 aa19.57■□□□□ 0.72
PAX3-203ENST00000344493 PPM1GO15355 546 aaPredicted RBP19.56■□□□□ 0.72
PAX3-203ENST00000344493 IGF1RP08069 1367 aa19.54■□□□□ 0.72
PAX3-203ENST00000344493 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
PAX3-203ENST00000344493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
PAX3-203ENST00000344493 GSE1Q14687 1217 aa19.53■□□□□ 0.72
PAX3-203ENST00000344493 NCOA1Q15788 1441 aa19.52■□□□□ 0.72
PAX3-203ENST00000344493 L3MBTL2Q969R5 705 aa19.52■□□□□ 0.72
PAX3-203ENST00000344493 FGD6Q6ZV73 1430 aa19.52■□□□□ 0.71
PAX3-203ENST00000344493 PCF11O94913 1555 aaKnown RBP19.51■□□□□ 0.71
PAX3-203ENST00000344493 TCERG1O14776 1098 aaKnown RBP19.5■□□□□ 0.71
PAX3-203ENST00000344493 EXOC6Q8TAG9 804 aa19.5■□□□□ 0.71
PAX3-203ENST00000344493 BACH2Q9BYV9 841 aa19.5■□□□□ 0.71
PAX3-203ENST00000344493 NAIPQ13075 1403 aa19.5■□□□□ 0.71
PAX3-203ENST00000344493 KIF7Q2M1P5 1343 aa19.49■□□□□ 0.71
PAX3-203ENST00000344493 RRP7BPQ9NSQ0 103 aa19.49■□□□□ 0.71
PAX3-203ENST00000344493 CARMIL1Q5VZK9 1371 aa19.48■□□□□ 0.71
PAX3-203ENST00000344493 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
PAX3-203ENST00000344493 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
PAX3-203ENST00000344493 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
PAX3-203ENST00000344493 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
PAX3-203ENST00000344493 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
PAX3-203ENST00000344493 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
PAX3-203ENST00000344493 FOXD1Q16676 465 aa19.46■□□□□ 0.71
PAX3-203ENST00000344493 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
PAX3-203ENST00000344493 SLC4A3P48751 1232 aa19.45■□□□□ 0.7
PAX3-203ENST00000344493 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
PAX3-203ENST00000344493 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms