RNA–Protein interactions for RNA: ENST00000344493.8

PAX3-203, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-203ENST00000344493 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
PAX3-203ENST00000344493 HRCP23327 699 aa24.78■■□□□ 1.56
PAX3-203ENST00000344493 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.5
PAX3-203ENST00000344493 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
PAX3-203ENST00000344493 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
PAX3-203ENST00000344493 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
PAX3-203ENST00000344493 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
PAX3-203ENST00000344493 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
PAX3-203ENST00000344493 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
PAX3-203ENST00000344493 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
PAX3-203ENST00000344493 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
PAX3-203ENST00000344493 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
PAX3-203ENST00000344493 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
PAX3-203ENST00000344493 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
PAX3-203ENST00000344493 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
PAX3-203ENST00000344493 MYT1Q01538 1121 aa23.04■■□□□ 1.28
PAX3-203ENST00000344493 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
PAX3-203ENST00000344493 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
PAX3-203ENST00000344493 NEUROD1Q13562 356 aa22.89■■□□□ 1.26
PAX3-203ENST00000344493 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
PAX3-203ENST00000344493 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
PAX3-203ENST00000344493 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
PAX3-203ENST00000344493 FAM9AQ8IZU1 332 aaPredicted RBP22.51■■□□□ 1.19
PAX3-203ENST00000344493 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
PAX3-203ENST00000344493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.48■■□□□ 1.19
PAX3-203ENST00000344493 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
PAX3-203ENST00000344493 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
PAX3-203ENST00000344493 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
PAX3-203ENST00000344493 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
PAX3-203ENST00000344493 TTBK1Q5TCY1 1321 aaPredicted RBP21.99■■□□□ 1.11
PAX3-203ENST00000344493 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
PAX3-203ENST00000344493 MIER1Q8N108 512 aa21.92■■□□□ 1.1
PAX3-203ENST00000344493 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
PAX3-203ENST00000344493 ABCC9O60706 1549 aa21.83■■□□□ 1.08
PAX3-203ENST00000344493 RB1CC1Q8TDY2 1594 aa21.79■■□□□ 1.08
PAX3-203ENST00000344493 BCL11AQ9H165 835 aa21.73■■□□□ 1.07
PAX3-203ENST00000344493 ANP32EQ9BTT0 268 aa21.65■■□□□ 1.06
PAX3-203ENST00000344493 SUPT16HQ9Y5B9 1047 aaKnown RBP21.62■■□□□ 1.05
PAX3-203ENST00000344493 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
PAX3-203ENST00000344493 CSRNP3Q8WYN3 585 aa21.48■■□□□ 1.03
PAX3-203ENST00000344493 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
PAX3-203ENST00000344493 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.02
PAX3-203ENST00000344493 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
PAX3-203ENST00000344493 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
PAX3-203ENST00000344493 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.02
PAX3-203ENST00000344493 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
PAX3-203ENST00000344493 BCANQ96GW7 911 aa21.24■□□□□ 0.99
PAX3-203ENST00000344493 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
PAX3-203ENST00000344493 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
PAX3-203ENST00000344493 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
PAX3-203ENST00000344493 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
PAX3-203ENST00000344493 SOGA1O94964 1423 aa21.13■□□□□ 0.97
PAX3-203ENST00000344493 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
PAX3-203ENST00000344493 WIZO95785 1651 aa21.1■□□□□ 0.97
PAX3-203ENST00000344493 KCNH8Q96L42 1107 aa21.08■□□□□ 0.97
PAX3-203ENST00000344493 FKBP8Q14318 412 aa21.06■□□□□ 0.96
PAX3-203ENST00000344493 RBM19Q9Y4C8 960 aaKnown RBP21.05■□□□□ 0.96
PAX3-203ENST00000344493 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
PAX3-203ENST00000344493 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
PAX3-203ENST00000344493 ITGAEP38570 1179 aa20.92■□□□□ 0.94
PAX3-203ENST00000344493 APLP2Q06481 763 aa20.92■□□□□ 0.94
PAX3-203ENST00000344493 DHX57Q6P158 1386 aaKnown RBP20.9■□□□□ 0.94
PAX3-203ENST00000344493 MSH5O43196 834 aa20.89■□□□□ 0.94
PAX3-203ENST00000344493 GOLGA3Q08378 1498 aa20.89■□□□□ 0.93
PAX3-203ENST00000344493 PRKCSHP14314 528 aaPredicted RBP20.86■□□□□ 0.93
PAX3-203ENST00000344493 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
PAX3-203ENST00000344493 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
PAX3-203ENST00000344493 EEA1Q15075 1411 aa20.84■□□□□ 0.93
PAX3-203ENST00000344493 NEFLP07196 543 aa20.82■□□□□ 0.92
PAX3-203ENST00000344493 CLIP1P30622 1438 aa20.8■□□□□ 0.92
PAX3-203ENST00000344493 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
PAX3-203ENST00000344493 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
PAX3-203ENST00000344493 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
PAX3-203ENST00000344493 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.9
PAX3-203ENST00000344493 NACADO15069 1562 aa20.67■□□□□ 0.9
PAX3-203ENST00000344493 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
PAX3-203ENST00000344493 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
PAX3-203ENST00000344493 FANCIQ9NVI1 1328 aa20.6■□□□□ 0.89
PAX3-203ENST00000344493 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
PAX3-203ENST00000344493 KANK4Q5T7N3 995 aaPredicted RBP20.57■□□□□ 0.88
PAX3-203ENST00000344493 DEKP35659 375 aaKnown RBP20.55■□□□□ 0.88
PAX3-203ENST00000344493 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
PAX3-203ENST00000344493 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
PAX3-203ENST00000344493 HIRIP3Q9BW71 556 aaPredicted RBP20.53■□□□□ 0.88
PAX3-203ENST00000344493 KIF21BO75037 1637 aa20.52■□□□□ 0.88
PAX3-203ENST00000344493 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
PAX3-203ENST00000344493 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
PAX3-203ENST00000344493 ANP32CO43423 234 aa20.44■□□□□ 0.86
PAX3-203ENST00000344493 ANO8Q9HCE9 1232 aaPredicted RBP20.43■□□□□ 0.86
PAX3-203ENST00000344493 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
PAX3-203ENST00000344493 SIN3AQ96ST3 1273 aa20.42■□□□□ 0.86
PAX3-203ENST00000344493 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
PAX3-203ENST00000344493 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
PAX3-203ENST00000344493 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
PAX3-203ENST00000344493 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
PAX3-203ENST00000344493 NBR1Q14596 966 aa20.36■□□□□ 0.85
PAX3-203ENST00000344493 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
PAX3-203ENST00000344493 CCNB3Q8WWL7 1395 aa20.35■□□□□ 0.85
PAX3-203ENST00000344493 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
PAX3-203ENST00000344493 MAPKBP1O60336 1514 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms