RNA–Protein interactions for RNA: ENST00000341322.4

BRWD1-202, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene BRWD1, Length 2,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-202ENST00000341322 GAPVD1Q14C86 1478 aa32.24■■■□□ 2.75
BRWD1-202ENST00000341322 CCNB3Q8WWL7 1395 aa32.23■■■□□ 2.75
BRWD1-202ENST00000341322 ITGAEP38570 1179 aa32.22■■■□□ 2.75
BRWD1-202ENST00000341322 PCF11O94913 1555 aaKnown RBP32.2■■■□□ 2.75
BRWD1-202ENST00000341322 FHAD1B1AJZ9 1412 aa32.18■■■□□ 2.74
BRWD1-202ENST00000341322 DIEXFQ68CQ4 756 aaKnown RBP32.18■■■□□ 2.74
BRWD1-202ENST00000341322 CTTNBP2Q8WZ74 1663 aa32.17■■■□□ 2.74
BRWD1-202ENST00000341322 MAP3K1Q13233 1512 aa32.17■■■□□ 2.74
BRWD1-202ENST00000341322 LRRC9Q6ZRR7 1453 aa32.17■■■□□ 2.74
BRWD1-202ENST00000341322 DHX57Q6P158 1386 aaKnown RBP32.13■■■□□ 2.73
BRWD1-202ENST00000341322 TARBP1Q13395 1621 aaKnown RBP32.12■■■□□ 2.73
BRWD1-202ENST00000341322 PHLDB1Q86UU1 1377 aa32.1■■■□□ 2.73
BRWD1-202ENST00000341322 ZNF316A6NFI3 1004 aaPredicted RBP32.09■■■□□ 2.73
BRWD1-202ENST00000341322 EFCAB5A4FU69 1503 aa32.08■■■□□ 2.73
BRWD1-202ENST00000341322 CFAP43Q8NDM7 1665 aa32.04■■■□□ 2.72
BRWD1-202ENST00000341322 AQRO60306 1485 aaKnown RBP eCLIP32.02■■■□□ 2.722e-12■■■□□ 14.9
BRWD1-202ENST00000341322 CASKIN1Q8WXD9 1431 aa32.01■■■□□ 2.71
BRWD1-202ENST00000341322 FYCO1Q9BQS8 1478 aa31.99■■■□□ 2.71
BRWD1-202ENST00000341322 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
BRWD1-202ENST00000341322 FAM50AQ14320 339 aaKnown RBP31.95■■■□□ 2.71
BRWD1-202ENST00000341322 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
BRWD1-202ENST00000341322 FMN1Q68DA7 1419 aa31.91■■■□□ 2.7
BRWD1-202ENST00000341322 SAMD9Q5K651 1589 aa31.91■■■□□ 2.7
BRWD1-202ENST00000341322 CLSPNQ9HAW4 1339 aa31.89■■■□□ 2.7
BRWD1-202ENST00000341322 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
BRWD1-202ENST00000341322 RAB3GAP2Q9H2M9 1393 aa31.88■■■□□ 2.69
BRWD1-202ENST00000341322 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
BRWD1-202ENST00000341322 LRRIQ1Q96JM4 1722 aa31.81■■■□□ 2.68
BRWD1-202ENST00000341322 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
BRWD1-202ENST00000341322 SETD5Q9C0A6 1442 aa31.76■■■□□ 2.67
BRWD1-202ENST00000341322 GRIN2BQ13224 1484 aa31.75■■■□□ 2.67
BRWD1-202ENST00000341322 MTUS2Q5JR59 1369 aa31.74■■■□□ 2.67
BRWD1-202ENST00000341322 WDR62O43379 1518 aa31.71■■■□□ 2.67
BRWD1-202ENST00000341322 IFT140Q96RY7 1462 aa31.7■■■□□ 2.66
BRWD1-202ENST00000341322 SCAF1Q9H7N4 1312 aaKnown RBP31.66■■■□□ 2.66
BRWD1-202ENST00000341322 MAPKBP1O60336 1514 aa31.66■■■□□ 2.66
BRWD1-202ENST00000341322 IQGAP2Q13576 1575 aa31.66■■■□□ 2.66
BRWD1-202ENST00000341322 FGD6Q6ZV73 1430 aa31.65■■■□□ 2.66
BRWD1-202ENST00000341322 MIER1Q8N108 512 aa31.63■■■□□ 2.65
BRWD1-202ENST00000341322 ERCC6Q03468 1493 aa31.61■■■□□ 2.65
BRWD1-202ENST00000341322 NEUROD1Q13562 356 aa31.6■■■□□ 2.65
BRWD1-202ENST00000341322 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
BRWD1-202ENST00000341322 ARID3CA6NKF2 412 aa31.59■■■□□ 2.65
BRWD1-202ENST00000341322 MAGI3Q5TCQ9 1506 aa31.58■■■□□ 2.65
BRWD1-202ENST00000341322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.57■■■□□ 2.64
BRWD1-202ENST00000341322 PTPRKQ15262 1439 aa31.55■■■□□ 2.64
BRWD1-202ENST00000341322 THOC2Q8NI27 1593 aaKnown RBP31.54■■■□□ 2.64
BRWD1-202ENST00000341322 SIN3AQ96ST3 1273 aa31.53■■■□□ 2.64
BRWD1-202ENST00000341322 EIF4G3O43432 1585 aaKnown RBP31.52■■■□□ 2.64
BRWD1-202ENST00000341322 ACIN1Q9UKV3 1341 aaKnown RBP31.52■■■□□ 2.64
BRWD1-202ENST00000341322 MYOM3Q5VTT5 1437 aa31.5■■■□□ 2.63
BRWD1-202ENST00000341322 EHBP1L1Q8N3D4 1523 aa31.48■■■□□ 2.63
BRWD1-202ENST00000341322 SUPT6HQ7KZ85 1726 aaKnown RBP31.48■■■□□ 2.63
BRWD1-202ENST00000341322 CDK13Q14004 1512 aaKnown RBP31.46■■■□□ 2.63
BRWD1-202ENST00000341322 UGGT2Q9NYU1 1516 aa31.46■■■□□ 2.63
BRWD1-202ENST00000341322 EPRSP07814 1512 aaKnown RBP31.45■■■□□ 2.62
BRWD1-202ENST00000341322 HECW1Q76N89 1606 aa31.43■■■□□ 2.62
BRWD1-202ENST00000341322 CCDC18Q5T9S5 1454 aa31.43■■■□□ 2.62
BRWD1-202ENST00000341322 GRIN2AQ12879 1464 aa31.42■■■□□ 2.62
BRWD1-202ENST00000341322 KIAA0586Q9BVV6 1533 aa31.42■■■□□ 2.62
BRWD1-202ENST00000341322 YTHDC1Q96MU7 727 aaKnown RBP31.41■■■□□ 2.62
BRWD1-202ENST00000341322 DISP1Q96F81 1524 aa31.4■■■□□ 2.62
BRWD1-202ENST00000341322 ARHGEF11O15085 1522 aa31.4■■■□□ 2.62
BRWD1-202ENST00000341322 FBLN2P98095 1184 aa31.36■■■□□ 2.61
BRWD1-202ENST00000341322 PTPN23Q9H3S7 1636 aa31.35■■■□□ 2.61
BRWD1-202ENST00000341322 CENPBP07199 599 aaPredicted RBP31.35■■■□□ 2.61
BRWD1-202ENST00000341322 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
BRWD1-202ENST00000341322 KIAA0556O60303 1618 aa31.34■■■□□ 2.61
BRWD1-202ENST00000341322 HFM1A2PYH4 1435 aa31.32■■■□□ 2.6
BRWD1-202ENST00000341322 CHIC2Q9UKJ5 165 aa31.31■■■□□ 2.6
BRWD1-202ENST00000341322 NAIPQ13075 1403 aa31.29■■■□□ 2.6
BRWD1-202ENST00000341322 MAGI1Q96QZ7 1491 aaPredicted RBP31.27■■■□□ 2.6
BRWD1-202ENST00000341322 RRP7BPQ9NSQ0 103 aa31.26■■■□□ 2.6
BRWD1-202ENST00000341322 CEP170Q5SW79 1584 aa31.26■■■□□ 2.59
BRWD1-202ENST00000341322 SYNJ2O15056 1496 aa31.23■■■□□ 2.59
BRWD1-202ENST00000341322 NUP153P49790 1475 aaKnown RBP31.23■■■□□ 2.59
BRWD1-202ENST00000341322 TCOF1Q13428 1488 aaKnown RBP31.21■■■□□ 2.59
BRWD1-202ENST00000341322 UACAQ9BZF9 1416 aa31.18■■■□□ 2.58
BRWD1-202ENST00000341322 GTF3C3Q9Y5Q9 886 aa31.16■■■□□ 2.58
BRWD1-202ENST00000341322 RAPGEF6Q8TEU7 1601 aa31.16■■■□□ 2.58
BRWD1-202ENST00000341322 JPH4Q96JJ6 628 aa31.13■■■□□ 2.57
BRWD1-202ENST00000341322 PPP1R15AO75807 674 aaPredicted RBP31.12■■■□□ 2.57
BRWD1-202ENST00000341322 PLB1Q6P1J6 1458 aa31.12■■■□□ 2.57
BRWD1-202ENST00000341322 ZNF644Q9H582 1327 aaPredicted RBP31.11■■■□□ 2.57
BRWD1-202ENST00000341322 MIA2Q96PC5 1412 aa31.11■■■□□ 2.57
BRWD1-202ENST00000341322 TIMELESSQ9UNS1 1208 aa31.08■■■□□ 2.57
BRWD1-202ENST00000341322 KDM6BO15054 1643 aa31.08■■■□□ 2.57
BRWD1-202ENST00000341322 NUP160Q12769 1436 aa31.08■■■□□ 2.57
BRWD1-202ENST00000341322 HIRIP3Q9BW71 556 aaPredicted RBP31.07■■■□□ 2.56
BRWD1-202ENST00000341322 PRG4Q92954 1404 aaPredicted RBP31.06■■■□□ 2.56
BRWD1-202ENST00000341322 TRIM52Q96A61 297 aa31.02■■■□□ 2.56
BRWD1-202ENST00000341322 CDK11AQ9UQ88 783 aaPredicted RBP31■■■□□ 2.55
BRWD1-202ENST00000341322 TONSLQ96HA7 1378 aa31■■■□□ 2.55
BRWD1-202ENST00000341322 GCC2Q8IWJ2 1684 aa30.99■■■□□ 2.55
BRWD1-202ENST00000341322 DENND4BO75064 1496 aaPredicted RBP30.98■■■□□ 2.55
BRWD1-202ENST00000341322 CARMIL2Q6F5E8 1435 aa30.96■■■□□ 2.55
BRWD1-202ENST00000341322 DAPK1P53355 1430 aa30.95■■■□□ 2.54
BRWD1-202ENST00000341322 ABCC5O15440 1437 aa30.94■■■□□ 2.54
BRWD1-202ENST00000341322 TROQ12816 1431 aaPredicted RBP30.94■■■□□ 2.54
BRWD1-202ENST00000341322 AKNAQ7Z591 1439 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms