RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 DIEXFQ68CQ4 756 aaKnown RBP29.94■■■□□ 2.38
SPG7-202ENST00000341316 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
SPG7-202ENST00000341316 FHAD1B1AJZ9 1412 aa29.92■■■□□ 2.38
SPG7-202ENST00000341316 FHOD3Q2V2M9 1422 aa29.92■■■□□ 2.38
SPG7-202ENST00000341316 PCF11O94913 1555 aaKnown RBP29.9■■■□□ 2.38
SPG7-202ENST00000341316 LRRC9Q6ZRR7 1453 aa29.89■■■□□ 2.38
SPG7-202ENST00000341316 DHX57Q6P158 1386 aaKnown RBP29.88■■■□□ 2.37
SPG7-202ENST00000341316 ZNF316A6NFI3 1004 aaPredicted RBP29.87■■■□□ 2.37
SPG7-202ENST00000341316 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
SPG7-202ENST00000341316 CTTNBP2Q8WZ74 1663 aa29.87■■■□□ 2.37
SPG7-202ENST00000341316 ACIN1Q9UKV3 1341 aaKnown RBP29.86■■■□□ 2.37
SPG7-202ENST00000341316 PELP1Q8IZL8 1130 aaKnown RBP29.85■■■□□ 2.37
SPG7-202ENST00000341316 EFCAB5A4FU69 1503 aa29.85■■■□□ 2.37
SPG7-202ENST00000341316 CFAP43Q8NDM7 1665 aa29.81■■■□□ 2.36
SPG7-202ENST00000341316 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
SPG7-202ENST00000341316 PHLDB1Q86UU1 1377 aa29.79■■■□□ 2.36
SPG7-202ENST00000341316 ITGAEP38570 1179 aa29.79■■■□□ 2.36
SPG7-202ENST00000341316 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
SPG7-202ENST00000341316 ATP1B4Q9UN42 357 aaPredicted RBP29.78■■■□□ 2.36
SPG7-202ENST00000341316 FYCO1Q9BQS8 1478 aa29.75■■■□□ 2.35
SPG7-202ENST00000341316 CLSPNQ9HAW4 1339 aa29.75■■■□□ 2.35
SPG7-202ENST00000341316 CASKIN1Q8WXD9 1431 aa29.75■■■□□ 2.35
SPG7-202ENST00000341316 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.358e-7■■■■■ 32.8
SPG7-202ENST00000341316 SAMD9Q5K651 1589 aa29.66■■■□□ 2.34
SPG7-202ENST00000341316 FMN1Q68DA7 1419 aa29.65■■■□□ 2.34
SPG7-202ENST00000341316 SNAPC4Q5SXM2 1469 aa29.65■■■□□ 2.34
SPG7-202ENST00000341316 CENPBP07199 599 aaPredicted RBP29.63■■■□□ 2.33
SPG7-202ENST00000341316 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
SPG7-202ENST00000341316 RAB3GAP2Q9H2M9 1393 aa29.62■■■□□ 2.33
SPG7-202ENST00000341316 FAM50AQ14320 339 aaKnown RBP29.59■■■□□ 2.33
SPG7-202ENST00000341316 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
SPG7-202ENST00000341316 SETD5Q9C0A6 1442 aa29.52■■■□□ 2.32
SPG7-202ENST00000341316 GTF3C3Q9Y5Q9 886 aa29.52■■■□□ 2.32
SPG7-202ENST00000341316 LRRIQ1Q96JM4 1722 aa29.5■■■□□ 2.31
SPG7-202ENST00000341316 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
SPG7-202ENST00000341316 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
SPG7-202ENST00000341316 MAPKBP1O60336 1514 aa29.46■■■□□ 2.31
SPG7-202ENST00000341316 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
SPG7-202ENST00000341316 MTUS2Q5JR59 1369 aa29.43■■■□□ 2.3
SPG7-202ENST00000341316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.41■■■□□ 2.31e-6■□□□□ 9.6
SPG7-202ENST00000341316 FGD6Q6ZV73 1430 aa29.4■■■□□ 2.3
SPG7-202ENST00000341316 WDR62O43379 1518 aa29.4■■■□□ 2.3
SPG7-202ENST00000341316 MIER1Q8N108 512 aa29.4■■■□□ 2.3
SPG7-202ENST00000341316 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
SPG7-202ENST00000341316 IQGAP2Q13576 1575 aa29.38■■■□□ 2.29
SPG7-202ENST00000341316 THOC2Q8NI27 1593 aaKnown RBP29.38■■■□□ 2.29
SPG7-202ENST00000341316 NCOA2Q15596 1464 aa29.33■■■□□ 2.29
SPG7-202ENST00000341316 MAGI3Q5TCQ9 1506 aa29.3■■■□□ 2.28
SPG7-202ENST00000341316 EHBP1L1Q8N3D4 1523 aa29.27■■■□□ 2.28
SPG7-202ENST00000341316 PTPRKQ15262 1439 aa29.26■■■□□ 2.28
SPG7-202ENST00000341316 MYOM3Q5VTT5 1437 aa29.26■■■□□ 2.27
SPG7-202ENST00000341316 YTHDC1Q96MU7 727 aaKnown RBP29.25■■■□□ 2.27
SPG7-202ENST00000341316 SUPT6HQ7KZ85 1726 aaKnown RBP29.24■■■□□ 2.27
SPG7-202ENST00000341316 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
SPG7-202ENST00000341316 UGGT2Q9NYU1 1516 aa29.22■■■□□ 2.27
SPG7-202ENST00000341316 SIN3AQ96ST3 1273 aa29.22■■■□□ 2.27
SPG7-202ENST00000341316 HECW1Q76N89 1606 aa29.21■■■□□ 2.27
SPG7-202ENST00000341316 ARHGEF11O15085 1522 aa29.21■■■□□ 2.27
SPG7-202ENST00000341316 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
SPG7-202ENST00000341316 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
SPG7-202ENST00000341316 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
SPG7-202ENST00000341316 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
SPG7-202ENST00000341316 KIAA0586Q9BVV6 1533 aa29.15■■■□□ 2.26
SPG7-202ENST00000341316 HFM1A2PYH4 1435 aa29.13■■■□□ 2.25
SPG7-202ENST00000341316 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
SPG7-202ENST00000341316 PTPN23Q9H3S7 1636 aa29.12■■■□□ 2.25
SPG7-202ENST00000341316 DISP1Q96F81 1524 aa29.12■■■□□ 2.25
SPG7-202ENST00000341316 ARID3CA6NKF2 412 aa29.11■■■□□ 2.25
SPG7-202ENST00000341316 KIAA0556O60303 1618 aa29.08■■■□□ 2.25
SPG7-202ENST00000341316 NAIPQ13075 1403 aa29.08■■■□□ 2.25
SPG7-202ENST00000341316 TCOF1Q13428 1488 aaKnown RBP29.04■■■□□ 2.24
SPG7-202ENST00000341316 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
SPG7-202ENST00000341316 UACAQ9BZF9 1416 aa29■■■□□ 2.23
SPG7-202ENST00000341316 TIMELESSQ9UNS1 1208 aa28.97■■■□□ 2.23
SPG7-202ENST00000341316 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
SPG7-202ENST00000341316 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
SPG7-202ENST00000341316 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
SPG7-202ENST00000341316 SYNJ2O15056 1496 aa28.96■■■□□ 2.23
SPG7-202ENST00000341316 CHIC2Q9UKJ5 165 aa28.94■■■□□ 2.22
SPG7-202ENST00000341316 RRP7BPQ9NSQ0 103 aa28.93■■■□□ 2.22
SPG7-202ENST00000341316 MIA2Q96PC5 1412 aa28.93■■■□□ 2.22
SPG7-202ENST00000341316 FBLN2P98095 1184 aa28.91■■■□□ 2.22
SPG7-202ENST00000341316 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
SPG7-202ENST00000341316 PPP1R15AO75807 674 aaPredicted RBP28.91■■■□□ 2.22
SPG7-202ENST00000341316 GCC2Q8IWJ2 1684 aa28.84■■■□□ 2.21
SPG7-202ENST00000341316 KDM6BO15054 1643 aa28.83■■■□□ 2.21
SPG7-202ENST00000341316 NUP160Q12769 1436 aa28.82■■■□□ 2.2
SPG7-202ENST00000341316 AKNAQ7Z591 1439 aa28.82■■■□□ 2.2
SPG7-202ENST00000341316 PLB1Q6P1J6 1458 aa28.81■■■□□ 2.2
SPG7-202ENST00000341316 TONSLQ96HA7 1378 aa28.8■■■□□ 2.2
SPG7-202ENST00000341316 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
SPG7-202ENST00000341316 JPH4Q96JJ6 628 aa28.78■■■□□ 2.2
SPG7-202ENST00000341316 ZNF644Q9H582 1327 aaPredicted RBP28.77■■■□□ 2.2
SPG7-202ENST00000341316 PRG4Q92954 1404 aaPredicted RBP28.76■■■□□ 2.2
SPG7-202ENST00000341316 CDK11AQ9UQ88 783 aaPredicted RBP28.75■■■□□ 2.19
SPG7-202ENST00000341316 HIRIP3Q9BW71 556 aaPredicted RBP28.74■■■□□ 2.19
SPG7-202ENST00000341316 DAPK1P53355 1430 aa28.74■■■□□ 2.19
SPG7-202ENST00000341316 ABCC5O15440 1437 aa28.71■■■□□ 2.19
SPG7-202ENST00000341316 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
SPG7-202ENST00000341316 CARMIL2Q6F5E8 1435 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms