RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 CTTNBP2Q8WZ74 1663 aa33.31■■■□□ 2.92
CLDND1-201ENST00000341181 NUP160Q12769 1436 aa33.27■■■□□ 2.92
CLDND1-201ENST00000341181 RANGAP1P46060 587 aaPredicted RBP33.24■■■□□ 2.91
CLDND1-201ENST00000341181 CEP162Q5TB80 1403 aa33.23■■■□□ 2.91
CLDND1-201ENST00000341181 IQGAP2Q13576 1575 aa33.17■■■□□ 2.9
CLDND1-201ENST00000341181 KIAA0586Q9BVV6 1533 aa33.16■■■□□ 2.9
CLDND1-201ENST00000341181 CLIP1P30622 1438 aa33.1■■■□□ 2.89
CLDND1-201ENST00000341181 CLASP1Q7Z460 1538 aa33.03■■■□□ 2.88
CLDND1-201ENST00000341181 ARHGAP35Q9NRY4 1499 aa33.02■■■□□ 2.88
CLDND1-201ENST00000341181 UGGT2Q9NYU1 1516 aa32.98■■■□□ 2.87
CLDND1-201ENST00000341181 SAMD9Q5K651 1589 aa32.95■■■□□ 2.87
CLDND1-201ENST00000341181 OSCARQ8IYS5 282 aa32.93■■■□□ 2.86
CLDND1-201ENST00000341181 ARAP1Q96P48 1450 aa32.93■■■□□ 2.86
CLDND1-201ENST00000341181 JPH4Q96JJ6 628 aa32.93■■■□□ 2.86
CLDND1-201ENST00000341181 EFCAB5A4FU69 1503 aa32.92■■■□□ 2.86
CLDND1-201ENST00000341181 P3H3Q8IVL6 736 aa32.92■■■□□ 2.86
CLDND1-201ENST00000341181 DISP1Q96F81 1524 aa32.91■■■□□ 2.86
CLDND1-201ENST00000341181 SHROOM2Q13796 1616 aa32.9■■■□□ 2.86
CLDND1-201ENST00000341181 FHOD3Q2V2M9 1422 aa32.88■■■□□ 2.85
CLDND1-201ENST00000341181 KIAA0556O60303 1618 aa32.86■■■□□ 2.85
CLDND1-201ENST00000341181 PRG4Q92954 1404 aaPredicted RBP32.82■■■□□ 2.85
CLDND1-201ENST00000341181 ERCC6L2Q5T890 1561 aa32.81■■■□□ 2.84
CLDND1-201ENST00000341181 CARMIL2Q6F5E8 1435 aa32.73■■■□□ 2.83
CLDND1-201ENST00000341181 VPS8Q8N3P4 1428 aa32.71■■■□□ 2.83
CLDND1-201ENST00000341181 TTBK1Q5TCY1 1321 aaPredicted RBP32.68■■■□□ 2.82
CLDND1-201ENST00000341181 PCF11O94913 1555 aaKnown RBP32.6■■■□□ 2.81
CLDND1-201ENST00000341181 FMN1Q68DA7 1419 aa32.6■■■□□ 2.81
CLDND1-201ENST00000341181 PTPRGP23470 1445 aa32.51■■■□□ 2.79
CLDND1-201ENST00000341181 PLB1Q6P1J6 1458 aa32.51■■■□□ 2.79
CLDND1-201ENST00000341181 ARHGEF11O15085 1522 aa32.5■■■□□ 2.79
CLDND1-201ENST00000341181 CASKIN1Q8WXD9 1431 aa32.48■■■□□ 2.79
CLDND1-201ENST00000341181 FYCO1Q9BQS8 1478 aa32.47■■■□□ 2.79
CLDND1-201ENST00000341181 RAPGEF6Q8TEU7 1601 aa32.43■■■□□ 2.78
CLDND1-201ENST00000341181 ATP1B4Q9UN42 357 aaPredicted RBP32.43■■■□□ 2.78
CLDND1-201ENST00000341181 ABCA8O94911 1581 aa32.41■■■□□ 2.78
CLDND1-201ENST00000341181 LRRIQ1Q96JM4 1722 aa32.4■■■□□ 2.78
CLDND1-201ENST00000341181 RIMBP3CA6NJZ7 1639 aa32.4■■■□□ 2.78
CLDND1-201ENST00000341181 RIMBP3BA6NNM3 1639 aa32.4■■■□□ 2.78
CLDND1-201ENST00000341181 RIMBP3Q9UFD9 1639 aa32.4■■■□□ 2.78
CLDND1-201ENST00000341181 NUP153P49790 1475 aaKnown RBP32.37■■■□□ 2.77
CLDND1-201ENST00000341181 HECW1Q76N89 1606 aa32.37■■■□□ 2.77
CLDND1-201ENST00000341181 ARID3CA6NKF2 412 aa32.35■■■□□ 2.77
CLDND1-201ENST00000341181 UACAQ9BZF9 1416 aa32.33■■■□□ 2.77
CLDND1-201ENST00000341181 PPARGC1BQ86YN6 1023 aaKnown RBP32.31■■■□□ 2.76
CLDND1-201ENST00000341181 CDK13Q14004 1512 aaKnown RBP32.3■■■□□ 2.76
CLDND1-201ENST00000341181 EPRSP07814 1512 aaKnown RBP32.29■■■□□ 2.76
CLDND1-201ENST00000341181 TIAM1Q13009 1591 aa32.28■■■□□ 2.76
CLDND1-201ENST00000341181 ABCC2Q92887 1545 aa32.28■■■□□ 2.76
CLDND1-201ENST00000341181 CFAP43Q8NDM7 1665 aa32.27■■■□□ 2.76
CLDND1-201ENST00000341181 ADCY10Q96PN6 1610 aa32.24■■■□□ 2.75
CLDND1-201ENST00000341181 APLP2Q06481 763 aa32.24■■■□□ 2.75
CLDND1-201ENST00000341181 CCDC18Q5T9S5 1454 aa32.21■■■□□ 2.75
CLDND1-201ENST00000341181 KANK4Q5T7N3 995 aaPredicted RBP32.21■■■□□ 2.75
CLDND1-201ENST00000341181 MAP3K1Q13233 1512 aa32.2■■■□□ 2.74
CLDND1-201ENST00000341181 UHRF1BP1LA0JNW5 1464 aa32.19■■■□□ 2.74
CLDND1-201ENST00000341181 ATP10BO94823 1461 aa32.17■■■□□ 2.74
CLDND1-201ENST00000341181 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
CLDND1-201ENST00000341181 MAGI3Q5TCQ9 1506 aa32.15■■■□□ 2.74
CLDND1-201ENST00000341181 LRRC9Q6ZRR7 1453 aa32.12■■■□□ 2.73
CLDND1-201ENST00000341181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.11■■■□□ 2.73
CLDND1-201ENST00000341181 HNRNPUL2Q1KMD3 747 aaKnown RBP32.11■■■□□ 2.73
CLDND1-201ENST00000341181 KDM5BQ9UGL1 1544 aa32.09■■■□□ 2.73
CLDND1-201ENST00000341181 ZCCHC11Q5TAX3 1644 aaKnown RBP32.09■■■□□ 2.73
CLDND1-201ENST00000341181 MTUS2Q5JR59 1369 aa32.03■■■□□ 2.72
CLDND1-201ENST00000341181 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
CLDND1-201ENST00000341181 EHBP1L1Q8N3D4 1523 aa32■■■□□ 2.71
CLDND1-201ENST00000341181 TROQ12816 1431 aaPredicted RBP31.93■■■□□ 2.7
CLDND1-201ENST00000341181 CDK11AQ9UQ88 783 aaPredicted RBP31.92■■■□□ 2.7
CLDND1-201ENST00000341181 KIF14Q15058 1648 aa31.9■■■□□ 2.7
CLDND1-201ENST00000341181 PLEKHD1A6NEE1 506 aa31.89■■■□□ 2.7
CLDND1-201ENST00000341181 SUPT6HQ7KZ85 1726 aaKnown RBP31.87■■■□□ 2.69
CLDND1-201ENST00000341181 NCOA2Q15596 1464 aa31.86■■■□□ 2.69
CLDND1-201ENST00000341181 ASXL2Q76L83 1435 aa31.84■■■□□ 2.69
CLDND1-201ENST00000341181 PHLDB1Q86UU1 1377 aa31.84■■■□□ 2.69
CLDND1-201ENST00000341181 NPM1P06748 294 aaKnown RBP eCLIP31.84■■■□□ 2.69
CLDND1-201ENST00000341181 WDR7Q9Y4E6 1490 aa31.82■■■□□ 2.68
CLDND1-201ENST00000341181 KCNH8Q96L42 1107 aa31.75■■■□□ 2.67
CLDND1-201ENST00000341181 MAPKBP1O60336 1514 aa31.75■■■□□ 2.67
CLDND1-201ENST00000341181 ABCC10Q5T3U5 1492 aa31.73■■■□□ 2.67
CLDND1-201ENST00000341181 TTC37Q6PGP7 1564 aa31.72■■■□□ 2.67
CLDND1-201ENST00000341181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.71■■■□□ 2.67
CLDND1-201ENST00000341181 PCGF6Q9BYE7 350 aa31.68■■■□□ 2.66
CLDND1-201ENST00000341181 MYOM3Q5VTT5 1437 aa31.67■■■□□ 2.66
CLDND1-201ENST00000341181 CCNB3Q8WWL7 1395 aa31.65■■■□□ 2.66
CLDND1-201ENST00000341181 GPATCH8Q9UKJ3 1502 aaKnown RBP31.63■■■□□ 2.65
CLDND1-201ENST00000341181 CDC42BPAQ5VT25 1732 aa31.62■■■□□ 2.65
CLDND1-201ENST00000341181 FGD6Q6ZV73 1430 aa31.62■■■□□ 2.65
CLDND1-201ENST00000341181 RRBP1Q9P2E9 1410 aaKnown RBP31.62■■■□□ 2.65
CLDND1-201ENST00000341181 TRIM26Q12899 539 aaPredicted RBP31.6■■■□□ 2.65
CLDND1-201ENST00000341181 ABCA9Q8IUA7 1624 aa31.58■■■□□ 2.65
CLDND1-201ENST00000341181 ITSN2Q9NZM3 1697 aa31.56■■■□□ 2.64
CLDND1-201ENST00000341181 PREX2Q70Z35 1606 aa31.54■■■□□ 2.64
CLDND1-201ENST00000341181 MYO5CQ9NQX4 1742 aa31.53■■■□□ 2.64
CLDND1-201ENST00000341181 CDC42BPBQ9Y5S2 1711 aa31.53■■■□□ 2.64
CLDND1-201ENST00000341181 DIP2BQ9P265 1576 aa31.52■■■□□ 2.64
CLDND1-201ENST00000341181 PTPN23Q9H3S7 1636 aa31.51■■■□□ 2.63
CLDND1-201ENST00000341181 MIA2Q96PC5 1412 aa31.5■■■□□ 2.63
CLDND1-201ENST00000341181 CFDP1Q9UEE9 299 aaPredicted RBP31.49■■■□□ 2.63
CLDND1-201ENST00000341181 ZNF644Q9H582 1327 aaPredicted RBP31.48■■■□□ 2.63
CLDND1-201ENST00000341181 FAM50AQ14320 339 aaKnown RBP31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms