RNA–Protein interactions for RNA: ENST00000340951.8

EXD3-201, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXD3, Length 2,872 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-201ENST00000340951 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
EXD3-201ENST00000340951 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
EXD3-201ENST00000340951 ERICH6Q7L0X2 663 aa24.22■■□□□ 1.47
EXD3-201ENST00000340951 FGD5Q6ZNL6 1462 aa24.22■■□□□ 1.47
EXD3-201ENST00000340951 RRBP1Q9P2E9 1410 aaKnown RBP24.21■■□□□ 1.47
EXD3-201ENST00000340951 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.46
EXD3-201ENST00000340951 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.46
EXD3-201ENST00000340951 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
EXD3-201ENST00000340951 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
EXD3-201ENST00000340951 FANCIQ9NVI1 1328 aa24.14■■□□□ 1.45
EXD3-201ENST00000340951 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.45
EXD3-201ENST00000340951 NESP48681 1621 aa24.13■■□□□ 1.45
EXD3-201ENST00000340951 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
EXD3-201ENST00000340951 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
EXD3-201ENST00000340951 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
EXD3-201ENST00000340951 ANP32CO43423 234 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 MAPKBP1O60336 1514 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 CCER2I3L3R5 266 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.44
EXD3-201ENST00000340951 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
EXD3-201ENST00000340951 HIRIP3Q9BW71 556 aaPredicted RBP24.06■■□□□ 1.44
EXD3-201ENST00000340951 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
EXD3-201ENST00000340951 IRX6P78412 446 aaPredicted RBP24■■□□□ 1.43
EXD3-201ENST00000340951 PRKCSHP14314 528 aaPredicted RBP23.99■■□□□ 1.43
EXD3-201ENST00000340951 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
EXD3-201ENST00000340951 FAM50AQ14320 339 aaKnown RBP23.95■■□□□ 1.42
EXD3-201ENST00000340951 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
EXD3-201ENST00000340951 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
EXD3-201ENST00000340951 DEKP35659 375 aaKnown RBP23.93■■□□□ 1.42
EXD3-201ENST00000340951 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
EXD3-201ENST00000340951 SETD5Q9C0A6 1442 aa23.91■■□□□ 1.42
EXD3-201ENST00000340951 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
EXD3-201ENST00000340951 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
EXD3-201ENST00000340951 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
EXD3-201ENST00000340951 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
EXD3-201ENST00000340951 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
EXD3-201ENST00000340951 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
EXD3-201ENST00000340951 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
EXD3-201ENST00000340951 TIAM1Q13009 1591 aa23.81■■□□□ 1.4
EXD3-201ENST00000340951 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
EXD3-201ENST00000340951 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
EXD3-201ENST00000340951 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
EXD3-201ENST00000340951 PPP4R2Q9NY27 417 aa23.75■■□□□ 1.39
EXD3-201ENST00000340951 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
EXD3-201ENST00000340951 NBR1Q14596 966 aa23.72■■□□□ 1.39
EXD3-201ENST00000340951 ERICH6BQ5W0A0 696 aa23.71■■□□□ 1.39
EXD3-201ENST00000340951 NOP58Q9Y2X3 529 aaKnown RBP23.68■■□□□ 1.38
EXD3-201ENST00000340951 B4GALNT3Q6L9W6 998 aa23.66■■□□□ 1.38
EXD3-201ENST00000340951 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
EXD3-201ENST00000340951 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
EXD3-201ENST00000340951 MAP3K1Q13233 1512 aa23.63■■□□□ 1.37
EXD3-201ENST00000340951 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
EXD3-201ENST00000340951 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
EXD3-201ENST00000340951 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
EXD3-201ENST00000340951 PAK3O75914 559 aaPredicted RBP23.6■■□□□ 1.37
EXD3-201ENST00000340951 ANO8Q9HCE9 1232 aaPredicted RBP23.6■■□□□ 1.37
EXD3-201ENST00000340951 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
EXD3-201ENST00000340951 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
EXD3-201ENST00000340951 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
EXD3-201ENST00000340951 CUL7Q14999 1698 aa23.54■■□□□ 1.36
EXD3-201ENST00000340951 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
EXD3-201ENST00000340951 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
EXD3-201ENST00000340951 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.356e-7■■□□□ 11.9
EXD3-201ENST00000340951 CFAP43Q8NDM7 1665 aa23.5■■□□□ 1.35
EXD3-201ENST00000340951 RTL5Q5HYW3 569 aaPredicted RBP23.48■■□□□ 1.35
EXD3-201ENST00000340951 CCDC184Q52MB2 194 aa23.47■■□□□ 1.35
EXD3-201ENST00000340951 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
EXD3-201ENST00000340951 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
EXD3-201ENST00000340951 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
EXD3-201ENST00000340951 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
EXD3-201ENST00000340951 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
EXD3-201ENST00000340951 FGD6Q6ZV73 1430 aa23.44■■□□□ 1.34
EXD3-201ENST00000340951 WASHC2AQ641Q2 1341 aa23.44■■□□□ 1.34
EXD3-201ENST00000340951 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
EXD3-201ENST00000340951 ANP32AP39687 249 aaKnown RBP23.43■■□□□ 1.34
EXD3-201ENST00000340951 CHIC2Q9UKJ5 165 aa23.43■■□□□ 1.34
EXD3-201ENST00000340951 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
EXD3-201ENST00000340951 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
EXD3-201ENST00000340951 IPO9Q96P70 1041 aaKnown RBP23.39■■□□□ 1.34
EXD3-201ENST00000340951 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
EXD3-201ENST00000340951 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
EXD3-201ENST00000340951 RRP7BPQ9NSQ0 103 aa23.37■■□□□ 1.33
EXD3-201ENST00000340951 ZBTB47Q9UFB7 747 aaPredicted RBP23.37■■□□□ 1.33
EXD3-201ENST00000340951 CCDC18Q5T9S5 1454 aa23.37■■□□□ 1.33
EXD3-201ENST00000340951 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
EXD3-201ENST00000340951 IL27Q8NEV9 243 aa23.34■■□□□ 1.33
EXD3-201ENST00000340951 UACAQ9BZF9 1416 aa23.33■■□□□ 1.33
EXD3-201ENST00000340951 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
EXD3-201ENST00000340951 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
EXD3-201ENST00000340951 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
EXD3-201ENST00000340951 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
EXD3-201ENST00000340951 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
EXD3-201ENST00000340951 RTN4Q9NQC3 1192 aaKnown RBP23.31■■□□□ 1.32
EXD3-201ENST00000340951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.3■■□□□ 1.323e-11■■■■■ 37.1
EXD3-201ENST00000340951 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
EXD3-201ENST00000340951 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
EXD3-201ENST00000340951 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
EXD3-201ENST00000340951 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.322e-6■■■■■ 36
EXD3-201ENST00000340951 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms