RNA–Protein interactions for RNA: ENST00000340951.8

EXD3-201, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXD3, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-201ENST00000340951 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
EXD3-201ENST00000340951 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
EXD3-201ENST00000340951 HRCP23327 699 aa29■■■□□ 2.23
EXD3-201ENST00000340951 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.2
EXD3-201ENST00000340951 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
EXD3-201ENST00000340951 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
EXD3-201ENST00000340951 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
EXD3-201ENST00000340951 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
EXD3-201ENST00000340951 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
EXD3-201ENST00000340951 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
EXD3-201ENST00000340951 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
EXD3-201ENST00000340951 PELP1Q8IZL8 1130 aaKnown RBP27.96■■■□□ 2.07
EXD3-201ENST00000340951 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
EXD3-201ENST00000340951 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
EXD3-201ENST00000340951 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
EXD3-201ENST00000340951 SCAF1Q9H7N4 1312 aaKnown RBP27.42■■□□□ 1.98
EXD3-201ENST00000340951 ZEB1P37275 1124 aaPredicted RBP27.29■■□□□ 1.96
EXD3-201ENST00000340951 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
EXD3-201ENST00000340951 ABCC9O60706 1549 aa27.16■■□□□ 1.94
EXD3-201ENST00000340951 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
EXD3-201ENST00000340951 MYT1Q01538 1121 aa26.85■■□□□ 1.89
EXD3-201ENST00000340951 ACIN1Q9UKV3 1341 aaKnown RBP26.77■■□□□ 1.88
EXD3-201ENST00000340951 NEUROD1Q13562 356 aa26.69■■□□□ 1.86
EXD3-201ENST00000340951 CECR2Q9BXF3 1484 aa26.63■■□□□ 1.85
EXD3-201ENST00000340951 NACADO15069 1562 aa26.62■■□□□ 1.85
EXD3-201ENST00000340951 FAM9AQ8IZU1 332 aaPredicted RBP26.56■■□□□ 1.84
EXD3-201ENST00000340951 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
EXD3-201ENST00000340951 GTF3C3Q9Y5Q9 886 aa26.56■■□□□ 1.84
EXD3-201ENST00000340951 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
EXD3-201ENST00000340951 EHMT2Q96KQ7 1210 aa26.52■■□□□ 1.84
EXD3-201ENST00000340951 CENPBP07199 599 aaPredicted RBP26.47■■□□□ 1.83
EXD3-201ENST00000340951 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
EXD3-201ENST00000340951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
EXD3-201ENST00000340951 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
EXD3-201ENST00000340951 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
EXD3-201ENST00000340951 WIZO95785 1651 aa26.25■■□□□ 1.79
EXD3-201ENST00000340951 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
EXD3-201ENST00000340951 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
EXD3-201ENST00000340951 YTHDC1Q96MU7 727 aaKnown RBP25.95■■□□□ 1.74
EXD3-201ENST00000340951 ZNF316A6NFI3 1004 aaPredicted RBP25.82■■□□□ 1.72
EXD3-201ENST00000340951 TTBK1Q5TCY1 1321 aaPredicted RBP25.81■■□□□ 1.72
EXD3-201ENST00000340951 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
EXD3-201ENST00000340951 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
EXD3-201ENST00000340951 CCDC88BA6NC98 1476 aa25.76■■□□□ 1.72
EXD3-201ENST00000340951 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
EXD3-201ENST00000340951 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
EXD3-201ENST00000340951 MIER1Q8N108 512 aa25.66■■□□□ 1.7
EXD3-201ENST00000340951 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
EXD3-201ENST00000340951 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
EXD3-201ENST00000340951 BICRAQ9NZM4 1560 aa25.59■■□□□ 1.69
EXD3-201ENST00000340951 SOGA1O94964 1423 aa25.51■■□□□ 1.67
EXD3-201ENST00000340951 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.676e-6■■■■■ 36.2
EXD3-201ENST00000340951 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
EXD3-201ENST00000340951 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
EXD3-201ENST00000340951 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
EXD3-201ENST00000340951 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
EXD3-201ENST00000340951 SUPT16HQ9Y5B9 1047 aaKnown RBP25.27■■□□□ 1.64
EXD3-201ENST00000340951 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
EXD3-201ENST00000340951 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
EXD3-201ENST00000340951 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
EXD3-201ENST00000340951 CLSPNQ9HAW4 1339 aa25.22■■□□□ 1.63
EXD3-201ENST00000340951 ANP32EQ9BTT0 268 aa25.21■■□□□ 1.63
EXD3-201ENST00000340951 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.63
EXD3-201ENST00000340951 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
EXD3-201ENST00000340951 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
EXD3-201ENST00000340951 TSHZ2Q9NRE2 1034 aa25.16■■□□□ 1.62
EXD3-201ENST00000340951 BCL11AQ9H165 835 aa25.15■■□□□ 1.62
EXD3-201ENST00000340951 SYNJ1O43426 1573 aa25.08■■□□□ 1.6
EXD3-201ENST00000340951 EEA1Q15075 1411 aa25.07■■□□□ 1.6
EXD3-201ENST00000340951 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
EXD3-201ENST00000340951 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
EXD3-201ENST00000340951 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
EXD3-201ENST00000340951 CLIP1P30622 1438 aa24.82■■□□□ 1.56
EXD3-201ENST00000340951 APLP2Q06481 763 aa24.79■■□□□ 1.56
EXD3-201ENST00000340951 BCANQ96GW7 911 aa24.79■■□□□ 1.56
EXD3-201ENST00000340951 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
EXD3-201ENST00000340951 DHX57Q6P158 1386 aaKnown RBP24.69■■□□□ 1.54
EXD3-201ENST00000340951 KIF21BO75037 1637 aa24.69■■□□□ 1.54
EXD3-201ENST00000340951 VPS8Q8N3P4 1428 aa24.68■■□□□ 1.54
EXD3-201ENST00000340951 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
EXD3-201ENST00000340951 FKBP8Q14318 412 aa24.64■■□□□ 1.54
EXD3-201ENST00000340951 KCNH8Q96L42 1107 aa24.64■■□□□ 1.54
EXD3-201ENST00000340951 HMGXB3Q12766 1538 aa24.6■■□□□ 1.53
EXD3-201ENST00000340951 CUX1P39880 1505 aa24.58■■□□□ 1.53
EXD3-201ENST00000340951 RBM19Q9Y4C8 960 aaKnown RBP24.57■■□□□ 1.52
EXD3-201ENST00000340951 CFTRP13569 1480 aa24.52■■□□□ 1.52
EXD3-201ENST00000340951 BIVM-ERCC5R4GMW8 1640 aa24.49■■□□□ 1.51
EXD3-201ENST00000340951 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
EXD3-201ENST00000340951 NEFLP07196 543 aa24.48■■□□□ 1.51
EXD3-201ENST00000340951 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
EXD3-201ENST00000340951 KANK4Q5T7N3 995 aaPredicted RBP24.44■■□□□ 1.5
EXD3-201ENST00000340951 ITGAEP38570 1179 aa24.4■■□□□ 1.5
EXD3-201ENST00000340951 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
EXD3-201ENST00000340951 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
EXD3-201ENST00000340951 CUX2O14529 1486 aa24.35■■□□□ 1.49
EXD3-201ENST00000340951 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
EXD3-201ENST00000340951 MSH5O43196 834 aa24.33■■□□□ 1.49
EXD3-201ENST00000340951 DDX10Q13206 875 aaKnown RBP24.32■■□□□ 1.48
EXD3-201ENST00000340951 IGF1RP08069 1367 aa24.27■■□□□ 1.48
EXD3-201ENST00000340951 TRIM52Q96A61 297 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms