RNA–Protein interactions for RNA: ENST00000340941.10

MCCC2-201, Transcript of methylcrotonoyl-CoA carboxylase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCCC2, Length 3,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC2-201ENST00000340941 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
MCCC2-201ENST00000340941 PRKCSHP14314 528 aaPredicted RBP16.15■□□□□ 0.18
MCCC2-201ENST00000340941 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
MCCC2-201ENST00000340941 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
MCCC2-201ENST00000340941 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
MCCC2-201ENST00000340941 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
MCCC2-201ENST00000340941 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
MCCC2-201ENST00000340941 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
MCCC2-201ENST00000340941 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
MCCC2-201ENST00000340941 ARXQ96QS3 562 aa16.08■□□□□ 0.16
MCCC2-201ENST00000340941 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
MCCC2-201ENST00000340941 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
MCCC2-201ENST00000340941 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
MCCC2-201ENST00000340941 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
MCCC2-201ENST00000340941 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
MCCC2-201ENST00000340941 KIF21BO75037 1637 aa16.02■□□□□ 0.16
MCCC2-201ENST00000340941 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
MCCC2-201ENST00000340941 NOP58Q9Y2X3 529 aaKnown RBP16■□□□□ 0.15
MCCC2-201ENST00000340941 GOLGA3Q08378 1498 aa16■□□□□ 0.15
MCCC2-201ENST00000340941 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
MCCC2-201ENST00000340941 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
MCCC2-201ENST00000340941 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
MCCC2-201ENST00000340941 IL27Q8NEV9 243 aa15.97■□□□□ 0.15
MCCC2-201ENST00000340941 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
MCCC2-201ENST00000340941 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
MCCC2-201ENST00000340941 HMGXB3Q12766 1538 aa15.95■□□□□ 0.14
MCCC2-201ENST00000340941 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
MCCC2-201ENST00000340941 NEFMP07197 916 aa15.89■□□□□ 0.13
MCCC2-201ENST00000340941 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
MCCC2-201ENST00000340941 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
MCCC2-201ENST00000340941 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
MCCC2-201ENST00000340941 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
MCCC2-201ENST00000340941 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
MCCC2-201ENST00000340941 EEA1Q15075 1411 aa15.84■□□□□ 0.13
MCCC2-201ENST00000340941 CCDC184Q52MB2 194 aa15.83■□□□□ 0.13
MCCC2-201ENST00000340941 FOXD1Q16676 465 aa15.83■□□□□ 0.12
MCCC2-201ENST00000340941 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
MCCC2-201ENST00000340941 SLC4A3P48751 1232 aa15.8■□□□□ 0.12
MCCC2-201ENST00000340941 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
MCCC2-201ENST00000340941 CUX1P39880 1505 aa15.78■□□□□ 0.12
MCCC2-201ENST00000340941 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
MCCC2-201ENST00000340941 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
MCCC2-201ENST00000340941 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
MCCC2-201ENST00000340941 CCER2I3L3R5 266 aa15.74■□□□□ 0.11
MCCC2-201ENST00000340941 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
MCCC2-201ENST00000340941 HSPA5P11021 654 aaKnown RBP15.73■□□□□ 0.11
MCCC2-201ENST00000340941 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
MCCC2-201ENST00000340941 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
MCCC2-201ENST00000340941 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
MCCC2-201ENST00000340941 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
MCCC2-201ENST00000340941 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
MCCC2-201ENST00000340941 EIF4G2P78344 907 aaKnown RBP eCLIP15.69■□□□□ 0.1
MCCC2-201ENST00000340941 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
MCCC2-201ENST00000340941 BRPF3Q9ULD4 1205 aa15.67■□□□□ 0.1
MCCC2-201ENST00000340941 IPO9Q96P70 1041 aaKnown RBP15.66■□□□□ 0.1
MCCC2-201ENST00000340941 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
MCCC2-201ENST00000340941 CFTRP13569 1480 aa15.65■□□□□ 0.1
MCCC2-201ENST00000340941 KDM2AQ9Y2K7 1162 aa15.64■□□□□ 0.09
MCCC2-201ENST00000340941 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
MCCC2-201ENST00000340941 RGS3P49796 1198 aa15.61■□□□□ 0.09
MCCC2-201ENST00000340941 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
MCCC2-201ENST00000340941 PLIN1O60240 522 aa15.59■□□□□ 0.09
MCCC2-201ENST00000340941 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.08
MCCC2-201ENST00000340941 ZNF777Q9ULD5 760 aaPredicted RBP15.57■□□□□ 0.08
MCCC2-201ENST00000340941 AKNAQ7Z591 1439 aa15.55■□□□□ 0.08
MCCC2-201ENST00000340941 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
MCCC2-201ENST00000340941 SPRYD3Q8NCJ5 442 aa15.54■□□□□ 0.08
MCCC2-201ENST00000340941 WASHC2AQ641Q2 1341 aa15.52■□□□□ 0.08
MCCC2-201ENST00000340941 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
MCCC2-201ENST00000340941 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
MCCC2-201ENST00000340941 L3MBTL2Q969R5 705 aa15.49■□□□□ 0.07
MCCC2-201ENST00000340941 LRRIQ1Q96JM4 1722 aa15.49■□□□□ 0.07
MCCC2-201ENST00000340941 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
MCCC2-201ENST00000340941 PDE4AP27815 886 aa15.47■□□□□ 0.07
MCCC2-201ENST00000340941 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
MCCC2-201ENST00000340941 CUX2O14529 1486 aa15.46■□□□□ 0.07
MCCC2-201ENST00000340941 C11orf95C9JLR9 678 aaPredicted RBP15.46■□□□□ 0.07
MCCC2-201ENST00000340941 GZF1Q9H116 711 aaPredicted RBP15.45■□□□□ 0.06
MCCC2-201ENST00000340941 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
MCCC2-201ENST00000340941 NAP1L5Q96NT1 182 aaPredicted RBP15.44■□□□□ 0.06
MCCC2-201ENST00000340941 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
MCCC2-201ENST00000340941 ARID3AQ99856 593 aa15.43■□□□□ 0.06
MCCC2-201ENST00000340941 NESP48681 1621 aa15.43■□□□□ 0.06
MCCC2-201ENST00000340941 CC2D1BQ5T0F9 858 aaKnown RBP15.42■□□□□ 0.06
MCCC2-201ENST00000340941 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
MCCC2-201ENST00000340941 NUDCQ9Y266 331 aa15.42■□□□□ 0.06
MCCC2-201ENST00000340941 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
MCCC2-201ENST00000340941 PPM1GO15355 546 aaPredicted RBP15.42■□□□□ 0.06
MCCC2-201ENST00000340941 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
MCCC2-201ENST00000340941 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
MCCC2-201ENST00000340941 FRAT1Q92837 279 aaPredicted RBP15.4■□□□□ 0.06
MCCC2-201ENST00000340941 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
MCCC2-201ENST00000340941 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
MCCC2-201ENST00000340941 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
MCCC2-201ENST00000340941 GSE1Q14687 1217 aa15.37■□□□□ 0.05
MCCC2-201ENST00000340941 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
MCCC2-201ENST00000340941 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
MCCC2-201ENST00000340941 CDCA7LQ96GN5 454 aa15.36■□□□□ 0.05
MCCC2-201ENST00000340941 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
MCCC2-201ENST00000340941 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms