RNA–Protein interactions for RNA: ENST00000340941.10

MCCC2-201, Transcript of methylcrotonoyl-CoA carboxylase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCCC2, Length 3,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC2-201ENST00000340941 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
MCCC2-201ENST00000340941 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
MCCC2-201ENST00000340941 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
MCCC2-201ENST00000340941 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
MCCC2-201ENST00000340941 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
MCCC2-201ENST00000340941 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
MCCC2-201ENST00000340941 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
MCCC2-201ENST00000340941 HRCP23327 699 aa19.21■□□□□ 0.67
MCCC2-201ENST00000340941 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
MCCC2-201ENST00000340941 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
MCCC2-201ENST00000340941 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
MCCC2-201ENST00000340941 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
MCCC2-201ENST00000340941 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
MCCC2-201ENST00000340941 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
MCCC2-201ENST00000340941 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
MCCC2-201ENST00000340941 YTHDC1Q96MU7 727 aaKnown RBP18.39■□□□□ 0.53
MCCC2-201ENST00000340941 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
MCCC2-201ENST00000340941 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
MCCC2-201ENST00000340941 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
MCCC2-201ENST00000340941 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
MCCC2-201ENST00000340941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
MCCC2-201ENST00000340941 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
MCCC2-201ENST00000340941 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
MCCC2-201ENST00000340941 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
MCCC2-201ENST00000340941 CENPBP07199 599 aaPredicted RBP18.02■□□□□ 0.48
MCCC2-201ENST00000340941 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
MCCC2-201ENST00000340941 TRIM41Q8WV44 630 aa18■□□□□ 0.47
MCCC2-201ENST00000340941 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
MCCC2-201ENST00000340941 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
MCCC2-201ENST00000340941 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
MCCC2-201ENST00000340941 MYT1Q01538 1121 aa17.64■□□□□ 0.41
MCCC2-201ENST00000340941 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
MCCC2-201ENST00000340941 ABCC9O60706 1549 aa17.55■□□□□ 0.4
MCCC2-201ENST00000340941 BCANQ96GW7 911 aa17.52■□□□□ 0.4
MCCC2-201ENST00000340941 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
MCCC2-201ENST00000340941 MIER1Q8N108 512 aa17.36■□□□□ 0.37
MCCC2-201ENST00000340941 NACADO15069 1562 aa17.3■□□□□ 0.36
MCCC2-201ENST00000340941 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
MCCC2-201ENST00000340941 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
MCCC2-201ENST00000340941 ITGAEP38570 1179 aa17.22■□□□□ 0.35
MCCC2-201ENST00000340941 APLP2Q06481 763 aa17.22■□□□□ 0.35
MCCC2-201ENST00000340941 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
MCCC2-201ENST00000340941 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.34
MCCC2-201ENST00000340941 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
MCCC2-201ENST00000340941 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
MCCC2-201ENST00000340941 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.33
MCCC2-201ENST00000340941 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
MCCC2-201ENST00000340941 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
MCCC2-201ENST00000340941 NEFLP07196 543 aa16.97■□□□□ 0.31
MCCC2-201ENST00000340941 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
MCCC2-201ENST00000340941 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
MCCC2-201ENST00000340941 FKBP8Q14318 412 aa16.94■□□□□ 0.3
MCCC2-201ENST00000340941 WIZO95785 1651 aa16.93■□□□□ 0.3
MCCC2-201ENST00000340941 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
MCCC2-201ENST00000340941 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
MCCC2-201ENST00000340941 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
MCCC2-201ENST00000340941 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
MCCC2-201ENST00000340941 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
MCCC2-201ENST00000340941 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
MCCC2-201ENST00000340941 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
MCCC2-201ENST00000340941 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
MCCC2-201ENST00000340941 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
MCCC2-201ENST00000340941 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
MCCC2-201ENST00000340941 DDX10Q13206 875 aaKnown RBP16.73■□□□□ 0.27
MCCC2-201ENST00000340941 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
MCCC2-201ENST00000340941 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
MCCC2-201ENST00000340941 NBR1Q14596 966 aa16.66■□□□□ 0.26
MCCC2-201ENST00000340941 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
MCCC2-201ENST00000340941 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
MCCC2-201ENST00000340941 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
MCCC2-201ENST00000340941 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
MCCC2-201ENST00000340941 RBM19Q9Y4C8 960 aaKnown RBP16.56■□□□□ 0.24
MCCC2-201ENST00000340941 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
MCCC2-201ENST00000340941 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
MCCC2-201ENST00000340941 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
MCCC2-201ENST00000340941 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.23
MCCC2-201ENST00000340941 FAM50AQ14320 339 aaKnown RBP16.49■□□□□ 0.23
MCCC2-201ENST00000340941 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
MCCC2-201ENST00000340941 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.22
MCCC2-201ENST00000340941 ANP32CO43423 234 aa16.42■□□□□ 0.22
MCCC2-201ENST00000340941 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
MCCC2-201ENST00000340941 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
MCCC2-201ENST00000340941 SOGA1O94964 1423 aa16.4■□□□□ 0.22
MCCC2-201ENST00000340941 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
MCCC2-201ENST00000340941 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
MCCC2-201ENST00000340941 P3H3Q8IVL6 736 aa16.35■□□□□ 0.21
MCCC2-201ENST00000340941 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
MCCC2-201ENST00000340941 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
MCCC2-201ENST00000340941 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
MCCC2-201ENST00000340941 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
MCCC2-201ENST00000340941 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
MCCC2-201ENST00000340941 B4GALNT3Q6L9W6 998 aa16.29■□□□□ 0.2
MCCC2-201ENST00000340941 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
MCCC2-201ENST00000340941 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
MCCC2-201ENST00000340941 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
MCCC2-201ENST00000340941 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
MCCC2-201ENST00000340941 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
MCCC2-201ENST00000340941 MSH5O43196 834 aa16.21■□□□□ 0.19
MCCC2-201ENST00000340941 CLIP1P30622 1438 aa16.21■□□□□ 0.19
MCCC2-201ENST00000340941 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms