RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
DFFB-202ENST00000339350 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
DFFB-202ENST00000339350 CFTRP13569 1480 aa17.93■□□□□ 0.46
DFFB-202ENST00000339350 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
DFFB-202ENST00000339350 NESP48681 1621 aa17.88■□□□□ 0.45
DFFB-202ENST00000339350 ERICH6BQ5W0A0 696 aa17.86■□□□□ 0.45
DFFB-202ENST00000339350 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
DFFB-202ENST00000339350 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
DFFB-202ENST00000339350 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
DFFB-202ENST00000339350 P3H3Q8IVL6 736 aa17.84■□□□□ 0.45
DFFB-202ENST00000339350 CUX2O14529 1486 aa17.82■□□□□ 0.44
DFFB-202ENST00000339350 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
DFFB-202ENST00000339350 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
DFFB-202ENST00000339350 FKBP8Q14318 412 aa17.81■□□□□ 0.44
DFFB-202ENST00000339350 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
DFFB-202ENST00000339350 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
DFFB-202ENST00000339350 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
DFFB-202ENST00000339350 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
DFFB-202ENST00000339350 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
DFFB-202ENST00000339350 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
DFFB-202ENST00000339350 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
DFFB-202ENST00000339350 HIRIP3Q9BW71 556 aaPredicted RBP17.72■□□□□ 0.43
DFFB-202ENST00000339350 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
DFFB-202ENST00000339350 IGF1RP08069 1367 aa17.71■□□□□ 0.43
DFFB-202ENST00000339350 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.43
DFFB-202ENST00000339350 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
DFFB-202ENST00000339350 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
DFFB-202ENST00000339350 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
DFFB-202ENST00000339350 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
DFFB-202ENST00000339350 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
DFFB-202ENST00000339350 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
DFFB-202ENST00000339350 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
DFFB-202ENST00000339350 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
DFFB-202ENST00000339350 NBR1Q14596 966 aa17.65■□□□□ 0.42
DFFB-202ENST00000339350 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
DFFB-202ENST00000339350 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
DFFB-202ENST00000339350 MAPKBP1O60336 1514 aa17.58■□□□□ 0.4
DFFB-202ENST00000339350 PHLDB1Q86UU1 1377 aa17.55■□□□□ 0.4
DFFB-202ENST00000339350 NEFLP07196 543 aa17.55■□□□□ 0.4
DFFB-202ENST00000339350 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
DFFB-202ENST00000339350 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
DFFB-202ENST00000339350 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
DFFB-202ENST00000339350 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
DFFB-202ENST00000339350 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.39
DFFB-202ENST00000339350 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
DFFB-202ENST00000339350 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
DFFB-202ENST00000339350 ARID3CA6NKF2 412 aa17.48■□□□□ 0.39
DFFB-202ENST00000339350 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
DFFB-202ENST00000339350 LRRC9Q6ZRR7 1453 aa17.46■□□□□ 0.39
DFFB-202ENST00000339350 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
DFFB-202ENST00000339350 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
DFFB-202ENST00000339350 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
DFFB-202ENST00000339350 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
DFFB-202ENST00000339350 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.38
DFFB-202ENST00000339350 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
DFFB-202ENST00000339350 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
DFFB-202ENST00000339350 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
DFFB-202ENST00000339350 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
DFFB-202ENST00000339350 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
DFFB-202ENST00000339350 ANP32CO43423 234 aa17.37■□□□□ 0.37
DFFB-202ENST00000339350 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
DFFB-202ENST00000339350 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
DFFB-202ENST00000339350 A0A0U1RQG5 324 aaPredicted RBP17.34■□□□□ 0.37
DFFB-202ENST00000339350 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
DFFB-202ENST00000339350 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.368e-7■■■■■ 28.7
DFFB-202ENST00000339350 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
DFFB-202ENST00000339350 PDE4CQ08493 712 aa17.31■□□□□ 0.36
DFFB-202ENST00000339350 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
DFFB-202ENST00000339350 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
DFFB-202ENST00000339350 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
DFFB-202ENST00000339350 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
DFFB-202ENST00000339350 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
DFFB-202ENST00000339350 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
DFFB-202ENST00000339350 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
DFFB-202ENST00000339350 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
DFFB-202ENST00000339350 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
DFFB-202ENST00000339350 PDIA4P13667 645 aaKnown RBP17.23■□□□□ 0.35
DFFB-202ENST00000339350 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
DFFB-202ENST00000339350 FBLN2P98095 1184 aa17.22■□□□□ 0.35
DFFB-202ENST00000339350 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
DFFB-202ENST00000339350 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
DFFB-202ENST00000339350 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
DFFB-202ENST00000339350 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
DFFB-202ENST00000339350 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.34
DFFB-202ENST00000339350 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
DFFB-202ENST00000339350 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
DFFB-202ENST00000339350 BRPF3Q9ULD4 1205 aa17.18■□□□□ 0.34
DFFB-202ENST00000339350 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
DFFB-202ENST00000339350 FYCO1Q9BQS8 1478 aa17.16■□□□□ 0.34
DFFB-202ENST00000339350 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
DFFB-202ENST00000339350 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
DFFB-202ENST00000339350 FGD1P98174 961 aa17.15■□□□□ 0.34
DFFB-202ENST00000339350 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
DFFB-202ENST00000339350 FOXD1Q16676 465 aa17.14■□□□□ 0.33
DFFB-202ENST00000339350 CUL7Q14999 1698 aa17.13■□□□□ 0.33
DFFB-202ENST00000339350 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
DFFB-202ENST00000339350 KLHL34Q8N239 644 aa17.13■□□□□ 0.33
DFFB-202ENST00000339350 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
DFFB-202ENST00000339350 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
DFFB-202ENST00000339350 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms