RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 KIF21BO75037 1637 aa27.71■■■□□ 2.03
SFN-201ENST00000339276 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
SFN-201ENST00000339276 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
SFN-201ENST00000339276 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
SFN-201ENST00000339276 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
SFN-201ENST00000339276 CTTNBP2Q8WZ74 1663 aa27.67■■■□□ 2.02
SFN-201ENST00000339276 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
SFN-201ENST00000339276 ERCC6L2Q5T890 1561 aa27.61■■■□□ 2.01
SFN-201ENST00000339276 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
SFN-201ENST00000339276 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
SFN-201ENST00000339276 EHMT2Q96KQ7 1210 aa27.55■■■□□ 2
SFN-201ENST00000339276 GOLGA3Q08378 1498 aa27.55■■■□□ 2
SFN-201ENST00000339276 ARAP1Q96P48 1450 aa27.52■■■□□ 2
SFN-201ENST00000339276 UGGT2Q9NYU1 1516 aa27.49■■□□□ 1.99
SFN-201ENST00000339276 DISP1Q96F81 1524 aa27.43■■□□□ 1.98
SFN-201ENST00000339276 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
SFN-201ENST00000339276 CARMIL2Q6F5E8 1435 aa27.4■■□□□ 1.98
SFN-201ENST00000339276 CYB5RLQ6IPT4 315 aa27.4■■□□□ 1.98
SFN-201ENST00000339276 KIAA0556O60303 1618 aa27.39■■□□□ 1.98
SFN-201ENST00000339276 RANGAP1P46060 587 aaPredicted RBP27.31■■□□□ 1.96
SFN-201ENST00000339276 SAMD9Q5K651 1589 aa27.3■■□□□ 1.96
SFN-201ENST00000339276 TNIKQ9UKE5 1360 aa27.29■■□□□ 1.96
SFN-201ENST00000339276 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
SFN-201ENST00000339276 PTPRGP23470 1445 aa27.25■■□□□ 1.95
SFN-201ENST00000339276 P3H3Q8IVL6 736 aa27.22■■□□□ 1.95
SFN-201ENST00000339276 EFCAB5A4FU69 1503 aa27.22■■□□□ 1.95
SFN-201ENST00000339276 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
SFN-201ENST00000339276 FHOD3Q2V2M9 1422 aa27.16■■□□□ 1.94
SFN-201ENST00000339276 ADCY10Q96PN6 1610 aa27.15■■□□□ 1.94
SFN-201ENST00000339276 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.94
SFN-201ENST00000339276 UACAQ9BZF9 1416 aa27.09■■□□□ 1.93
SFN-201ENST00000339276 PLB1Q6P1J6 1458 aa27.08■■□□□ 1.93
SFN-201ENST00000339276 ABCC2Q92887 1545 aa27.06■■□□□ 1.92
SFN-201ENST00000339276 CLIP1P30622 1438 aa27.06■■□□□ 1.92
SFN-201ENST00000339276 ABCA8O94911 1581 aa27.05■■□□□ 1.92
SFN-201ENST00000339276 UHRF1BP1LA0JNW5 1464 aa27.05■■□□□ 1.92
SFN-201ENST00000339276 CEP162Q5TB80 1403 aa27.03■■□□□ 1.92
SFN-201ENST00000339276 RAPGEF6Q8TEU7 1601 aa26.98■■□□□ 1.91
SFN-201ENST00000339276 FMN1Q68DA7 1419 aa26.93■■□□□ 1.9
SFN-201ENST00000339276 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
SFN-201ENST00000339276 NPM1P06748 294 aaKnown RBP eCLIP26.92■■□□□ 1.9
SFN-201ENST00000339276 ZCCHC11Q5TAX3 1644 aaKnown RBP26.92■■□□□ 1.9
SFN-201ENST00000339276 MAPKBP1O60336 1514 aa26.89■■□□□ 1.89
SFN-201ENST00000339276 NUP153P49790 1475 aaKnown RBP26.88■■□□□ 1.89
SFN-201ENST00000339276 ARID3CA6NKF2 412 aa26.86■■□□□ 1.89
SFN-201ENST00000339276 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
SFN-201ENST00000339276 HECW1Q76N89 1606 aa26.82■■□□□ 1.88
SFN-201ENST00000339276 ATP10BO94823 1461 aa26.82■■□□□ 1.88
SFN-201ENST00000339276 ASXL2Q76L83 1435 aa26.79■■□□□ 1.88
SFN-201ENST00000339276 CASKIN1Q8WXD9 1431 aa26.77■■□□□ 1.88
SFN-201ENST00000339276 ATP1B4Q9UN42 357 aaPredicted RBP26.76■■□□□ 1.87
SFN-201ENST00000339276 LRRIQ1Q96JM4 1722 aa26.75■■□□□ 1.87
SFN-201ENST00000339276 CDK13Q14004 1512 aaKnown RBP26.74■■□□□ 1.87
SFN-201ENST00000339276 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
SFN-201ENST00000339276 TRHP20396 242 aaPredicted RBP26.73■■□□□ 1.87
SFN-201ENST00000339276 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
SFN-201ENST00000339276 DIP2BQ9P265 1576 aa26.72■■□□□ 1.87
SFN-201ENST00000339276 KIF13AQ9H1H9 1805 aa26.72■■□□□ 1.87
SFN-201ENST00000339276 ABCC10Q5T3U5 1492 aa26.71■■□□□ 1.87
SFN-201ENST00000339276 WDR7Q9Y4E6 1490 aa26.71■■□□□ 1.87
SFN-201ENST00000339276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.7■■□□□ 1.87
SFN-201ENST00000339276 HNRNPUL2Q1KMD3 747 aaKnown RBP26.7■■□□□ 1.87
SFN-201ENST00000339276 VPS8Q8N3P4 1428 aa26.66■■□□□ 1.86
SFN-201ENST00000339276 CCDC18Q5T9S5 1454 aa26.63■■□□□ 1.85
SFN-201ENST00000339276 FAM69CQ0P6D2 419 aa26.63■■□□□ 1.85
SFN-201ENST00000339276 GLI2P10070 1586 aa26.59■■□□□ 1.85
SFN-201ENST00000339276 KCNH8Q96L42 1107 aa26.58■■□□□ 1.85
SFN-201ENST00000339276 PLEKHD1A6NEE1 506 aa26.56■■□□□ 1.84
SFN-201ENST00000339276 MAGI3Q5TCQ9 1506 aa26.52■■□□□ 1.84
SFN-201ENST00000339276 MAP3K4Q9Y6R4 1608 aa26.52■■□□□ 1.84
SFN-201ENST00000339276 CFAP43Q8NDM7 1665 aa26.5■■□□□ 1.83
SFN-201ENST00000339276 CDK11AQ9UQ88 783 aaPredicted RBP26.5■■□□□ 1.83
SFN-201ENST00000339276 TSPOAP1O95153 1857 aa26.49■■□□□ 1.83
SFN-201ENST00000339276 TROQ12816 1431 aaPredicted RBP26.49■■□□□ 1.83
SFN-201ENST00000339276 ABCA9Q8IUA7 1624 aa26.48■■□□□ 1.83
SFN-201ENST00000339276 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
SFN-201ENST00000339276 KIF14Q15058 1648 aa26.46■■□□□ 1.83
SFN-201ENST00000339276 PPRC1Q5VV67 1664 aaKnown RBP26.45■■□□□ 1.82
SFN-201ENST00000339276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.44■■□□□ 1.82
SFN-201ENST00000339276 TTC37Q6PGP7 1564 aa26.43■■□□□ 1.82
SFN-201ENST00000339276 CD109Q6YHK3 1445 aa26.41■■□□□ 1.82
SFN-201ENST00000339276 EHBP1L1Q8N3D4 1523 aa26.38■■□□□ 1.81
SFN-201ENST00000339276 MTUS2Q5JR59 1369 aa26.38■■□□□ 1.81
SFN-201ENST00000339276 MAP3K1Q13233 1512 aa26.37■■□□□ 1.81
SFN-201ENST00000339276 LRRC9Q6ZRR7 1453 aa26.32■■□□□ 1.8
SFN-201ENST00000339276 TEX14Q8IWB6 1497 aa26.32■■□□□ 1.8
SFN-201ENST00000339276 MYO5CQ9NQX4 1742 aa26.3■■□□□ 1.8
SFN-201ENST00000339276 APLP2Q06481 763 aa26.29■■□□□ 1.8
SFN-201ENST00000339276 KANK4Q5T7N3 995 aaPredicted RBP26.28■■□□□ 1.8
SFN-201ENST00000339276 SUPT6HQ7KZ85 1726 aaKnown RBP26.26■■□□□ 1.79
SFN-201ENST00000339276 PLCH2O75038 1416 aa26.24■■□□□ 1.79
SFN-201ENST00000339276 CDC42BPAQ5VT25 1732 aa26.24■■□□□ 1.79
SFN-201ENST00000339276 PREX2Q70Z35 1606 aa26.23■■□□□ 1.79
SFN-201ENST00000339276 NCOA2Q15596 1464 aa26.22■■□□□ 1.79
SFN-201ENST00000339276 ARAP3Q8WWN8 1544 aa26.21■■□□□ 1.79
SFN-201ENST00000339276 FANCAO15360 1455 aa26.21■■□□□ 1.79
SFN-201ENST00000339276 CDC42BPBQ9Y5S2 1711 aa26.21■■□□□ 1.79
SFN-201ENST00000339276 KDM6BO15054 1643 aa26.21■■□□□ 1.79
SFN-201ENST00000339276 CFAP74Q9C0B2 1584 aa26.2■■□□□ 1.78
SFN-201ENST00000339276 NEO1Q92859 1461 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms