RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 SHROOM2Q13796 1616 aa21.43■■□□□ 1.02
PHF20-201ENST00000339089 EEA1Q15075 1411 aa21.42■■□□□ 1.02
PHF20-201ENST00000339089 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
PHF20-201ENST00000339089 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
PHF20-201ENST00000339089 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
PHF20-201ENST00000339089 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
PHF20-201ENST00000339089 JPH4Q96JJ6 628 aa21.37■■□□□ 1.01
PHF20-201ENST00000339089 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
PHF20-201ENST00000339089 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
PHF20-201ENST00000339089 IQGAP2Q13576 1575 aa21.28■■□□□ 1
PHF20-201ENST00000339089 KIF21BO75037 1637 aa21.23■□□□□ 0.99
PHF20-201ENST00000339089 CTTNBP2Q8WZ74 1663 aa21.22■□□□□ 0.99
PHF20-201ENST00000339089 UGGT2Q9NYU1 1516 aa21.21■□□□□ 0.99
PHF20-201ENST00000339089 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
PHF20-201ENST00000339089 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
PHF20-201ENST00000339089 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
PHF20-201ENST00000339089 KIAA0556O60303 1618 aa21.09■□□□□ 0.97
PHF20-201ENST00000339089 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.96
PHF20-201ENST00000339089 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
PHF20-201ENST00000339089 PTPRGP23470 1445 aa21.05■□□□□ 0.96
PHF20-201ENST00000339089 SAMD9Q5K651 1589 aa21.01■□□□□ 0.95
PHF20-201ENST00000339089 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
PHF20-201ENST00000339089 ADCY10Q96PN6 1610 aa21■□□□□ 0.95
PHF20-201ENST00000339089 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
PHF20-201ENST00000339089 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
PHF20-201ENST00000339089 RANGAP1P46060 587 aaPredicted RBP20.94■□□□□ 0.94
PHF20-201ENST00000339089 UACAQ9BZF9 1416 aa20.93■□□□□ 0.94
PHF20-201ENST00000339089 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
PHF20-201ENST00000339089 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
PHF20-201ENST00000339089 ABCA8O94911 1581 aa20.89■□□□□ 0.93
PHF20-201ENST00000339089 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.93
PHF20-201ENST00000339089 ABCC2Q92887 1545 aa20.89■□□□□ 0.93
PHF20-201ENST00000339089 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.93
PHF20-201ENST00000339089 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
PHF20-201ENST00000339089 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
PHF20-201ENST00000339089 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.92
PHF20-201ENST00000339089 MAPKBP1O60336 1514 aa20.81■□□□□ 0.92
PHF20-201ENST00000339089 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
PHF20-201ENST00000339089 ZCCHC11Q5TAX3 1644 aaKnown RBP20.76■□□□□ 0.91
PHF20-201ENST00000339089 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
PHF20-201ENST00000339089 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
PHF20-201ENST00000339089 NUP153P49790 1475 aaKnown RBP20.73■□□□□ 0.91
PHF20-201ENST00000339089 CLIP1P30622 1438 aa20.73■□□□□ 0.91
PHF20-201ENST00000339089 ATP10BO94823 1461 aa20.73■□□□□ 0.91
PHF20-201ENST00000339089 ASXL2Q76L83 1435 aa20.72■□□□□ 0.91
PHF20-201ENST00000339089 ABCC10Q5T3U5 1492 aa20.71■□□□□ 0.91
PHF20-201ENST00000339089 KIF13AQ9H1H9 1805 aa20.7■□□□□ 0.9
PHF20-201ENST00000339089 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
PHF20-201ENST00000339089 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
PHF20-201ENST00000339089 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
PHF20-201ENST00000339089 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
PHF20-201ENST00000339089 FAM69CQ0P6D2 419 aa20.64■□□□□ 0.89
PHF20-201ENST00000339089 WDR7Q9Y4E6 1490 aa20.63■□□□□ 0.89
PHF20-201ENST00000339089 EPRSP07814 1512 aaKnown RBP20.62■□□□□ 0.89
PHF20-201ENST00000339089 GLI2P10070 1586 aa20.59■□□□□ 0.89
PHF20-201ENST00000339089 CASKIN1Q8WXD9 1431 aa20.58■□□□□ 0.89
PHF20-201ENST00000339089 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
PHF20-201ENST00000339089 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.89
PHF20-201ENST00000339089 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
PHF20-201ENST00000339089 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
PHF20-201ENST00000339089 KCNH8Q96L42 1107 aa20.52■□□□□ 0.88
PHF20-201ENST00000339089 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.87
PHF20-201ENST00000339089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.51■□□□□ 0.87
PHF20-201ENST00000339089 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
PHF20-201ENST00000339089 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
PHF20-201ENST00000339089 MAP3K4Q9Y6R4 1608 aa20.5■□□□□ 0.87
PHF20-201ENST00000339089 PPRC1Q5VV67 1664 aaKnown RBP20.5■□□□□ 0.87
PHF20-201ENST00000339089 PLEKHD1A6NEE1 506 aa20.47■□□□□ 0.87
PHF20-201ENST00000339089 TSPOAP1O95153 1857 aa20.46■□□□□ 0.87
PHF20-201ENST00000339089 ABCA9Q8IUA7 1624 aa20.44■□□□□ 0.86
PHF20-201ENST00000339089 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
PHF20-201ENST00000339089 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
PHF20-201ENST00000339089 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
PHF20-201ENST00000339089 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
PHF20-201ENST00000339089 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
PHF20-201ENST00000339089 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
PHF20-201ENST00000339089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.39■□□□□ 0.85
PHF20-201ENST00000339089 CDK11AQ9UQ88 783 aaPredicted RBP20.37■□□□□ 0.85
PHF20-201ENST00000339089 KIF14Q15058 1648 aa20.36■□□□□ 0.85
PHF20-201ENST00000339089 TTC37Q6PGP7 1564 aa20.36■□□□□ 0.85
PHF20-201ENST00000339089 COL17A1Q9UMD9 1497 aaPredicted RBP20.35■□□□□ 0.85
PHF20-201ENST00000339089 TEX14Q8IWB6 1497 aa20.32■□□□□ 0.84
PHF20-201ENST00000339089 TIAM1Q13009 1591 aa20.27■□□□□ 0.84
PHF20-201ENST00000339089 KDM6BO15054 1643 aa20.27■□□□□ 0.84
PHF20-201ENST00000339089 PLCH2O75038 1416 aa20.26■□□□□ 0.83
PHF20-201ENST00000339089 NEO1Q92859 1461 aa20.24■□□□□ 0.83
PHF20-201ENST00000339089 MAP3K1Q13233 1512 aa20.23■□□□□ 0.83
PHF20-201ENST00000339089 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
PHF20-201ENST00000339089 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
PHF20-201ENST00000339089 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
PHF20-201ENST00000339089 KANK4Q5T7N3 995 aaPredicted RBP20.21■□□□□ 0.83
PHF20-201ENST00000339089 FANCAO15360 1455 aa20.21■□□□□ 0.83
PHF20-201ENST00000339089 MYO5CQ9NQX4 1742 aa20.2■□□□□ 0.82
PHF20-201ENST00000339089 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
PHF20-201ENST00000339089 LRRC9Q6ZRR7 1453 aa20.2■□□□□ 0.82
PHF20-201ENST00000339089 CDC42BPBQ9Y5S2 1711 aa20.18■□□□□ 0.82
PHF20-201ENST00000339089 AKNAQ7Z591 1439 aa20.18■□□□□ 0.82
PHF20-201ENST00000339089 GPATCH8Q9UKJ3 1502 aaKnown RBP20.18■□□□□ 0.82
PHF20-201ENST00000339089 CDC42BPAQ5VT25 1732 aa20.17■□□□□ 0.82
PHF20-201ENST00000339089 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms