RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
TRIM2-201ENST00000338700 CARMIL2Q6F5E8 1435 aa10.42□□□□□ -0.74
TRIM2-201ENST00000338700 CUX2O14529 1486 aa10.41□□□□□ -0.74
TRIM2-201ENST00000338700 ANP32AP39687 249 aaKnown RBP10.41□□□□□ -0.74
TRIM2-201ENST00000338700 CLIP1P30622 1438 aa10.41□□□□□ -0.74
TRIM2-201ENST00000338700 ATAD2BQ9ULI0 1458 aa10.4□□□□□ -0.74
TRIM2-201ENST00000338700 KDM2AQ9Y2K7 1162 aa10.4□□□□□ -0.74
TRIM2-201ENST00000338700 EEA1Q15075 1411 aa10.39□□□□□ -0.75
TRIM2-201ENST00000338700 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
TRIM2-201ENST00000338700 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
TRIM2-201ENST00000338700 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRIM2-201ENST00000338700 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
TRIM2-201ENST00000338700 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
TRIM2-201ENST00000338700 TMC1Q8TDI8 760 aa10.38□□□□□ -0.75
TRIM2-201ENST00000338700 GOLGA3Q08378 1498 aa10.37□□□□□ -0.75
TRIM2-201ENST00000338700 DDX10Q13206 875 aaKnown RBP10.37□□□□□ -0.75
TRIM2-201ENST00000338700 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRIM2-201ENST00000338700 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
TRIM2-201ENST00000338700 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.36□□□□□ -0.75
TRIM2-201ENST00000338700 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
TRIM2-201ENST00000338700 MLECQ14165 292 aa10.36□□□□□ -0.75
TRIM2-201ENST00000338700 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
TRIM2-201ENST00000338700 CFDP1Q9UEE9 299 aaPredicted RBP10.35□□□□□ -0.75
TRIM2-201ENST00000338700 CARMIL1Q5VZK9 1371 aa10.35□□□□□ -0.75
TRIM2-201ENST00000338700 CCDC88BA6NC98 1476 aa10.35□□□□□ -0.75
TRIM2-201ENST00000338700 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
TRIM2-201ENST00000338700 HAP1P54257 671 aaPredicted RBP10.35□□□□□ -0.75
TRIM2-201ENST00000338700 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
TRIM2-201ENST00000338700 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
TRIM2-201ENST00000338700 HSP90AA1P07900 732 aaKnown RBP10.34□□□□□ -0.75
TRIM2-201ENST00000338700 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
TRIM2-201ENST00000338700 SALL2Q9Y467 1007 aaPredicted RBP10.33□□□□□ -0.76
TRIM2-201ENST00000338700 TOP2AP11388 1531 aaKnown RBP10.32□□□□□ -0.76
TRIM2-201ENST00000338700 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
TRIM2-201ENST00000338700 FKBP8Q14318 412 aa10.3□□□□□ -0.76
TRIM2-201ENST00000338700 ZBTB7CA1YPR0 619 aa10.3□□□□□ -0.76
TRIM2-201ENST00000338700 A0A0G2JS52 829 aa10.29□□□□□ -0.76
TRIM2-201ENST00000338700 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRIM2-201ENST00000338700 WIZO95785 1651 aa10.29□□□□□ -0.76
TRIM2-201ENST00000338700 HDGFP51858 240 aaKnown RBP10.29□□□□□ -0.76
TRIM2-201ENST00000338700 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
TRIM2-201ENST00000338700 ANP32BQ92688 251 aaKnown RBP10.28□□□□□ -0.76
TRIM2-201ENST00000338700 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
TRIM2-201ENST00000338700 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.76
TRIM2-201ENST00000338700 MYH16Q9H6N6 1097 aa10.27□□□□□ -0.77
TRIM2-201ENST00000338700 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
TRIM2-201ENST00000338700 JPH4Q96JJ6 628 aa10.25□□□□□ -0.77
TRIM2-201ENST00000338700 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
TRIM2-201ENST00000338700 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
TRIM2-201ENST00000338700 KANK1Q14678 1352 aa10.24□□□□□ -0.77
TRIM2-201ENST00000338700 RGL3Q3MIN7 710 aa10.24□□□□□ -0.77
TRIM2-201ENST00000338700 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
TRIM2-201ENST00000338700 CCNB3Q8WWL7 1395 aa10.24□□□□□ -0.77
TRIM2-201ENST00000338700 CFAP53Q96M91 514 aa10.23□□□□□ -0.77
TRIM2-201ENST00000338700 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.77
TRIM2-201ENST00000338700 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.78
TRIM2-201ENST00000338700 DNAJC5BQ9UF47 199 aa10.21□□□□□ -0.78
TRIM2-201ENST00000338700 FHAD1B1AJZ9 1412 aa10.2□□□□□ -0.78
TRIM2-201ENST00000338700 MRC2Q9UBG0 1479 aa10.19□□□□□ -0.78
TRIM2-201ENST00000338700 HIRIP3Q9BW71 556 aaPredicted RBP10.18□□□□□ -0.78
TRIM2-201ENST00000338700 KNSTRNQ9Y448 316 aa10.18□□□□□ -0.78
TRIM2-201ENST00000338700 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
TRIM2-201ENST00000338700 GGT6Q6P531 493 aa10.18□□□□□ -0.78
TRIM2-201ENST00000338700 CARD11Q9BXL7 1154 aa10.17□□□□□ -0.78
TRIM2-201ENST00000338700 POGKQ9P215 609 aa10.17□□□□□ -0.78
TRIM2-201ENST00000338700 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
TRIM2-201ENST00000338700 PTPRGP23470 1445 aa10.15□□□□□ -0.78
TRIM2-201ENST00000338700 PPM1GO15355 546 aaPredicted RBP10.14□□□□□ -0.79
TRIM2-201ENST00000338700 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
TRIM2-201ENST00000338700 NUDCQ9Y266 331 aa10.12□□□□□ -0.79
TRIM2-201ENST00000338700 MAPK8IP3Q9UPT6 1336 aa10.12□□□□□ -0.79
TRIM2-201ENST00000338700 ARXQ96QS3 562 aa10.11□□□□□ -0.79
TRIM2-201ENST00000338700 EID1Q9Y6B2 187 aa10.11□□□□□ -0.79
TRIM2-201ENST00000338700 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
TRIM2-201ENST00000338700 MIER1Q8N108 512 aa10.1□□□□□ -0.79
TRIM2-201ENST00000338700 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
TRIM2-201ENST00000338700 FMN1Q68DA7 1419 aa10.09□□□□□ -0.79
TRIM2-201ENST00000338700 NESP48681 1621 aa10.09□□□□□ -0.79
TRIM2-201ENST00000338700 ANP32EQ9BTT0 268 aa10.09□□□□□ -0.79
TRIM2-201ENST00000338700 PNNQ9H307 717 aaKnown RBP10.08□□□□□ -0.8
TRIM2-201ENST00000338700 AQRO60306 1485 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIM2-201ENST00000338700 FGD5Q6ZNL6 1462 aa10.08□□□□□ -0.8
TRIM2-201ENST00000338700 IRX6P78412 446 aaPredicted RBP10.08□□□□□ -0.8
TRIM2-201ENST00000338700 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
TRIM2-201ENST00000338700 CDK11BP21127 795 aaKnown RBP10.07□□□□□ -0.8
TRIM2-201ENST00000338700 CASC1Q6TDU7 716 aa10.07□□□□□ -0.8
TRIM2-201ENST00000338700 HMGXB3Q12766 1538 aa10.07□□□□□ -0.8
TRIM2-201ENST00000338700 BECN1Q14457 450 aa10.07□□□□□ -0.8
TRIM2-201ENST00000338700 LAS1LQ9Y4W2 734 aaKnown RBP10.07□□□□□ -0.8
TRIM2-201ENST00000338700 GRIN2BQ13224 1484 aa10.06□□□□□ -0.8
TRIM2-201ENST00000338700 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
TRIM2-201ENST00000338700 DDRGK1Q96HY6 314 aa10.06□□□□□ -0.8
TRIM2-201ENST00000338700 NCLP19338 710 aaKnown RBP10.05□□□□□ -0.8
TRIM2-201ENST00000338700 TMF1P82094 1093 aa10.05□□□□□ -0.8
TRIM2-201ENST00000338700 RAD54L2Q9Y4B4 1467 aa10.05□□□□□ -0.8
TRIM2-201ENST00000338700 ARHGAP35Q9NRY4 1499 aa10.04□□□□□ -0.8
TRIM2-201ENST00000338700 NPHP1O15259 732 aa10.04□□□□□ -0.8
TRIM2-201ENST00000338700 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
TRIM2-201ENST00000338700 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
TRIM2-201ENST00000338700 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms