RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 DCAF8L2P0C7V8 631 aa13.75□□□□□ -0.21
TRIM2-201ENST00000338700 NISCHQ9Y2I1 1504 aa13.51□□□□□ -0.25
TRIM2-201ENST00000338700 SUPT5HO00267 1087 aaKnown RBP12.7□□□□□ -0.38
TRIM2-201ENST00000338700 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
TRIM2-201ENST00000338700 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.44
TRIM2-201ENST00000338700 FAM9AQ8IZU1 332 aaPredicted RBP12.23□□□□□ -0.45
TRIM2-201ENST00000338700 APLP2Q06481 763 aa12.21□□□□□ -0.45
TRIM2-201ENST00000338700 ABCC9O60706 1549 aa12.12□□□□□ -0.47
TRIM2-201ENST00000338700 MYT1Q01538 1121 aa12.09□□□□□ -0.47
TRIM2-201ENST00000338700 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
TRIM2-201ENST00000338700 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
TRIM2-201ENST00000338700 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRIM2-201ENST00000338700 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
TRIM2-201ENST00000338700 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
TRIM2-201ENST00000338700 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
TRIM2-201ENST00000338700 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
TRIM2-201ENST00000338700 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
TRIM2-201ENST00000338700 ZEB1P37275 1124 aaPredicted RBP11.63□□□□□ -0.55
TRIM2-201ENST00000338700 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
TRIM2-201ENST00000338700 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
TRIM2-201ENST00000338700 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
TRIM2-201ENST00000338700 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
TRIM2-201ENST00000338700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
TRIM2-201ENST00000338700 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
TRIM2-201ENST00000338700 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.58
TRIM2-201ENST00000338700 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
TRIM2-201ENST00000338700 FBLN2P98095 1184 aa11.38□□□□□ -0.59
TRIM2-201ENST00000338700 NEFLP07196 543 aa11.37□□□□□ -0.59
TRIM2-201ENST00000338700 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
TRIM2-201ENST00000338700 SCRIBQ14160 1630 aa11.33□□□□□ -0.6
TRIM2-201ENST00000338700 ITGAEP38570 1179 aa11.3□□□□□ -0.6
TRIM2-201ENST00000338700 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
TRIM2-201ENST00000338700 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
TRIM2-201ENST00000338700 POLR3GLQ9BT43 218 aa11.22□□□□□ -0.61
TRIM2-201ENST00000338700 NACADO15069 1562 aa11.2□□□□□ -0.62
TRIM2-201ENST00000338700 CHIC1Q5VXU3 224 aa11.16□□□□□ -0.62
TRIM2-201ENST00000338700 LOC105371045A0A1W2PR82 267 aa11.14□□□□□ -0.63
TRIM2-201ENST00000338700 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRIM2-201ENST00000338700 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
TRIM2-201ENST00000338700 ZCCHC6Q5VYS8 1495 aaKnown RBP11.1□□□□□ -0.63
TRIM2-201ENST00000338700 ERCC6Q03468 1493 aa11.08□□□□□ -0.64
TRIM2-201ENST00000338700 FAM50AQ14320 339 aaKnown RBP11.07□□□□□ -0.64
TRIM2-201ENST00000338700 DAXXQ9UER7 740 aaPredicted RBP11.06□□□□□ -0.64
TRIM2-201ENST00000338700 CNGB1Q14028 1251 aaPredicted RBP11.04□□□□□ -0.64
TRIM2-201ENST00000338700 TRIM52Q96A61 297 aa11.02□□□□□ -0.64
TRIM2-201ENST00000338700 HRCP23327 699 aa11.02□□□□□ -0.65
TRIM2-201ENST00000338700 ESF1Q9H501 851 aaKnown RBP10.97□□□□□ -0.65
TRIM2-201ENST00000338700 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
TRIM2-201ENST00000338700 BAZ1BQ9UIG0 1483 aaKnown RBP10.9□□□□□ -0.66
TRIM2-201ENST00000338700 NEUROD1Q13562 356 aa10.9□□□□□ -0.67
TRIM2-201ENST00000338700 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
TRIM2-201ENST00000338700 BCANQ96GW7 911 aa10.87□□□□□ -0.67
TRIM2-201ENST00000338700 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
TRIM2-201ENST00000338700 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
TRIM2-201ENST00000338700 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
TRIM2-201ENST00000338700 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
TRIM2-201ENST00000338700 P3H3Q8IVL6 736 aa10.85□□□□□ -0.67
TRIM2-201ENST00000338700 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
TRIM2-201ENST00000338700 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
TRIM2-201ENST00000338700 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
TRIM2-201ENST00000338700 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
TRIM2-201ENST00000338700 ANP32CO43423 234 aa10.78□□□□□ -0.68
TRIM2-201ENST00000338700 ZNF777Q9ULD5 760 aaPredicted RBP10.77□□□□□ -0.68
TRIM2-201ENST00000338700 CECR2Q9BXF3 1484 aa10.76□□□□□ -0.69
TRIM2-201ENST00000338700 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
TRIM2-201ENST00000338700 NEFMP07197 916 aa10.74□□□□□ -0.69
TRIM2-201ENST00000338700 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
TRIM2-201ENST00000338700 DCAF1Q9Y4B6 1507 aa10.72□□□□□ -0.69
TRIM2-201ENST00000338700 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
TRIM2-201ENST00000338700 PDS5BQ9NTI5 1447 aa10.71□□□□□ -0.69
TRIM2-201ENST00000338700 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
TRIM2-201ENST00000338700 RTL5Q5HYW3 569 aaPredicted RBP10.69□□□□□ -0.7
TRIM2-201ENST00000338700 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
TRIM2-201ENST00000338700 SMARCA2P51531 1590 aa10.67□□□□□ -0.7
TRIM2-201ENST00000338700 ARID4BQ4LE39 1312 aaPredicted RBP10.66□□□□□ -0.7
TRIM2-201ENST00000338700 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
TRIM2-201ENST00000338700 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
TRIM2-201ENST00000338700 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
TRIM2-201ENST00000338700 PLEKHD1A6NEE1 506 aa10.57□□□□□ -0.72
TRIM2-201ENST00000338700 TONSLQ96HA7 1378 aa10.57□□□□□ -0.72
TRIM2-201ENST00000338700 RSF1Q96T23 1441 aaPredicted RBP10.57□□□□□ -0.72
TRIM2-201ENST00000338700 BCL11AQ9H165 835 aa10.55□□□□□ -0.72
TRIM2-201ENST00000338700 TSPY4P0CV99 314 aa10.54□□□□□ -0.72
TRIM2-201ENST00000338700 TSPY10P0CW01 314 aa10.54□□□□□ -0.72
TRIM2-201ENST00000338700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRIM2-201ENST00000338700 KIF27Q86VH2 1401 aa10.52□□□□□ -0.73
TRIM2-201ENST00000338700 AEBP2Q6ZN18 517 aaPredicted RBP10.52□□□□□ -0.73
TRIM2-201ENST00000338700 WRNQ14191 1432 aaPredicted RBP eCLIP10.51□□□□□ -0.73
TRIM2-201ENST00000338700 EIF5BO60841 1220 aaKnown RBP10.51□□□□□ -0.73
TRIM2-201ENST00000338700 GLIPR1L2Q4G1C9 344 aa10.5□□□□□ -0.73
TRIM2-201ENST00000338700 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
TRIM2-201ENST00000338700 CHIC2Q9UKJ5 165 aa10.49□□□□□ -0.73
TRIM2-201ENST00000338700 CEP164Q9UPV0 1460 aa10.48□□□□□ -0.73
TRIM2-201ENST00000338700 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
TRIM2-201ENST00000338700 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
TRIM2-201ENST00000338700 EIF4G1Q04637 1599 aaKnown RBP10.46□□□□□ -0.74
TRIM2-201ENST00000338700 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
TRIM2-201ENST00000338700 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
TRIM2-201ENST00000338700 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
TRIM2-201ENST00000338700 SOGA1O94964 1423 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms