RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
NUDCD3-201ENST00000338427 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
NUDCD3-201ENST00000338427 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
NUDCD3-201ENST00000338427 KIAA0586Q9BVV6 1533 aa23.02■■□□□ 1.28
NUDCD3-201ENST00000338427 CUL7Q14999 1698 aa22.98■■□□□ 1.27
NUDCD3-201ENST00000338427 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
NUDCD3-201ENST00000338427 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
NUDCD3-201ENST00000338427 PTPRGP23470 1445 aa22.86■■□□□ 1.25
NUDCD3-201ENST00000338427 ADCY10Q96PN6 1610 aa22.83■■□□□ 1.25
NUDCD3-201ENST00000338427 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
NUDCD3-201ENST00000338427 KIF13AQ9H1H9 1805 aa22.79■■□□□ 1.24
NUDCD3-201ENST00000338427 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
NUDCD3-201ENST00000338427 CARMIL2Q6F5E8 1435 aa22.77■■□□□ 1.24
NUDCD3-201ENST00000338427 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
NUDCD3-201ENST00000338427 ABCC10Q5T3U5 1492 aa22.74■■□□□ 1.23
NUDCD3-201ENST00000338427 DISP1Q96F81 1524 aa22.74■■□□□ 1.23
NUDCD3-201ENST00000338427 MAPKBP1O60336 1514 aa22.69■■□□□ 1.22
NUDCD3-201ENST00000338427 UGGT2Q9NYU1 1516 aa22.65■■□□□ 1.22
NUDCD3-201ENST00000338427 UACAQ9BZF9 1416 aa22.65■■□□□ 1.22
NUDCD3-201ENST00000338427 DIP2BQ9P265 1576 aa22.64■■□□□ 1.22
NUDCD3-201ENST00000338427 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
NUDCD3-201ENST00000338427 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
NUDCD3-201ENST00000338427 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
NUDCD3-201ENST00000338427 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
NUDCD3-201ENST00000338427 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
NUDCD3-201ENST00000338427 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
NUDCD3-201ENST00000338427 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
NUDCD3-201ENST00000338427 TSPOAP1O95153 1857 aa22.59■■□□□ 1.21
NUDCD3-201ENST00000338427 UHRF1BP1LA0JNW5 1464 aa22.58■■□□□ 1.2
NUDCD3-201ENST00000338427 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
NUDCD3-201ENST00000338427 PLB1Q6P1J6 1458 aa22.52■■□□□ 1.2
NUDCD3-201ENST00000338427 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
NUDCD3-201ENST00000338427 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
NUDCD3-201ENST00000338427 KDM5BQ9UGL1 1544 aa22.5■■□□□ 1.19
NUDCD3-201ENST00000338427 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
NUDCD3-201ENST00000338427 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
NUDCD3-201ENST00000338427 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
NUDCD3-201ENST00000338427 GOLGA3Q08378 1498 aa22.45■■□□□ 1.18
NUDCD3-201ENST00000338427 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
NUDCD3-201ENST00000338427 EPRSP07814 1512 aaKnown RBP22.43■■□□□ 1.18
NUDCD3-201ENST00000338427 KDM6BO15054 1643 aa22.42■■□□□ 1.18
NUDCD3-201ENST00000338427 GLI2P10070 1586 aa22.41■■□□□ 1.18
NUDCD3-201ENST00000338427 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
NUDCD3-201ENST00000338427 ABCA8O94911 1581 aa22.39■■□□□ 1.18
NUDCD3-201ENST00000338427 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
NUDCD3-201ENST00000338427 COL17A1Q9UMD9 1497 aaPredicted RBP22.37■■□□□ 1.17
NUDCD3-201ENST00000338427 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
NUDCD3-201ENST00000338427 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.16
NUDCD3-201ENST00000338427 EEA1Q15075 1411 aa22.32■■□□□ 1.16
NUDCD3-201ENST00000338427 ATP10BO94823 1461 aa22.3■■□□□ 1.16
NUDCD3-201ENST00000338427 MAP3K4Q9Y6R4 1608 aa22.29■■□□□ 1.16
NUDCD3-201ENST00000338427 CD109Q6YHK3 1445 aa22.26■■□□□ 1.15
NUDCD3-201ENST00000338427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
NUDCD3-201ENST00000338427 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
NUDCD3-201ENST00000338427 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
NUDCD3-201ENST00000338427 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
NUDCD3-201ENST00000338427 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
NUDCD3-201ENST00000338427 TEX14Q8IWB6 1497 aa22.2■■□□□ 1.14
NUDCD3-201ENST00000338427 RAPGEF6Q8TEU7 1601 aa22.15■■□□□ 1.14
NUDCD3-201ENST00000338427 MAGI3Q5TCQ9 1506 aa22.15■■□□□ 1.14
NUDCD3-201ENST00000338427 KIF21BO75037 1637 aa22.14■■□□□ 1.14
NUDCD3-201ENST00000338427 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
NUDCD3-201ENST00000338427 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
NUDCD3-201ENST00000338427 ATP1B4Q9UN42 357 aaPredicted RBP22.1■■□□□ 1.13
NUDCD3-201ENST00000338427 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
NUDCD3-201ENST00000338427 RAPGEF3O95398 923 aa22.06■■□□□ 1.12
NUDCD3-201ENST00000338427 ADGRL1O94910 1474 aa22.05■■□□□ 1.12
NUDCD3-201ENST00000338427 ABCA9Q8IUA7 1624 aa22.01■■□□□ 1.11
NUDCD3-201ENST00000338427 EFCAB5A4FU69 1503 aa22■■□□□ 1.11
NUDCD3-201ENST00000338427 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
NUDCD3-201ENST00000338427 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
NUDCD3-201ENST00000338427 ARAP3Q8WWN8 1544 aa21.97■■□□□ 1.11
NUDCD3-201ENST00000338427 PHLDB1Q86UU1 1377 aa21.91■■□□□ 1.1
NUDCD3-201ENST00000338427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
NUDCD3-201ENST00000338427 NEO1Q92859 1461 aa21.9■■□□□ 1.1
NUDCD3-201ENST00000338427 FMN1Q68DA7 1419 aa21.87■■□□□ 1.09
NUDCD3-201ENST00000338427 AKNAQ7Z591 1439 aa21.87■■□□□ 1.09
NUDCD3-201ENST00000338427 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
NUDCD3-201ENST00000338427 FANCAO15360 1455 aa21.82■■□□□ 1.08
NUDCD3-201ENST00000338427 ARID4BQ4LE39 1312 aaPredicted RBP21.81■■□□□ 1.08
NUDCD3-201ENST00000338427 FRMPD1Q5SYB0 1578 aa21.81■■□□□ 1.08
NUDCD3-201ENST00000338427 DENND4BO75064 1496 aaPredicted RBP21.8■■□□□ 1.08
NUDCD3-201ENST00000338427 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
NUDCD3-201ENST00000338427 PLCH2O75038 1416 aa21.78■■□□□ 1.08
NUDCD3-201ENST00000338427 HECW1Q76N89 1606 aa21.77■■□□□ 1.08
NUDCD3-201ENST00000338427 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
NUDCD3-201ENST00000338427 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
NUDCD3-201ENST00000338427 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
NUDCD3-201ENST00000338427 KIF14Q15058 1648 aa21.73■■□□□ 1.07
NUDCD3-201ENST00000338427 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
NUDCD3-201ENST00000338427 RICTORQ6R327 1708 aa21.72■■□□□ 1.07
NUDCD3-201ENST00000338427 YEATS2Q9ULM3 1422 aa21.72■■□□□ 1.07
NUDCD3-201ENST00000338427 MLECQ14165 292 aa21.7■■□□□ 1.06
NUDCD3-201ENST00000338427 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
NUDCD3-201ENST00000338427 CASKIN1Q8WXD9 1431 aa21.7■■□□□ 1.06
NUDCD3-201ENST00000338427 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
NUDCD3-201ENST00000338427 CLIP1P30622 1438 aa21.69■■□□□ 1.06
NUDCD3-201ENST00000338427 HECW2Q9P2P5 1572 aa21.67■■□□□ 1.06
NUDCD3-201ENST00000338427 ADAMTSL3P82987 1691 aa21.66■■□□□ 1.06
NUDCD3-201ENST00000338427 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms