RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 JPH4Q96JJ6 628 aa35.79■■■■□ 3.32
RAB28-203ENST00000338176 PRG4Q92954 1404 aaPredicted RBP35.75■■■■□ 3.31
RAB28-203ENST00000338176 KIAA0586Q9BVV6 1533 aa35.68■■■■□ 3.3
RAB28-203ENST00000338176 TRHP20396 242 aaPredicted RBP35.59■■■■□ 3.29
RAB28-203ENST00000338176 RAPGEF2Q9Y4G8 1499 aa35.55■■■■□ 3.28
RAB28-203ENST00000338176 IQGAP2Q13576 1575 aa35.45■■■■□ 3.27
RAB28-203ENST00000338176 PRXQ9BXM0 1461 aa35.36■■■■□ 3.25
RAB28-203ENST00000338176 TTBK1Q5TCY1 1321 aaPredicted RBP35.35■■■■□ 3.25
RAB28-203ENST00000338176 ADCY10Q96PN6 1610 aa35.28■■■■□ 3.24
RAB28-203ENST00000338176 CARMIL2Q6F5E8 1435 aa35.27■■■■□ 3.24
RAB28-203ENST00000338176 DISP1Q96F81 1524 aa35.27■■■■□ 3.24
RAB28-203ENST00000338176 CSRNP3Q8WYN3 585 aa35.25■■■■□ 3.23
RAB28-203ENST00000338176 PTPRGP23470 1445 aa35.25■■■■□ 3.23
RAB28-203ENST00000338176 CTTNBP2Q8WZ74 1663 aa35.25■■■■□ 3.23
RAB28-203ENST00000338176 UGGT2Q9NYU1 1516 aa35.23■■■■□ 3.23
RAB28-203ENST00000338176 CHIC1Q5VXU3 224 aa35.23■■■■□ 3.23
RAB28-203ENST00000338176 TNIKQ9UKE5 1360 aa35.23■■■■□ 3.23
RAB28-203ENST00000338176 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
RAB28-203ENST00000338176 KIAA0556O60303 1618 aa35.13■■■■□ 3.22
RAB28-203ENST00000338176 NPM1P06748 294 aaKnown RBP eCLIP35.13■■■■□ 3.21
RAB28-203ENST00000338176 EEA1Q15075 1411 aa35.12■■■■□ 3.21
RAB28-203ENST00000338176 KIF13AQ9H1H9 1805 aa35.05■■■■□ 3.2
RAB28-203ENST00000338176 MAPKBP1O60336 1514 aa35.02■■■■□ 3.2
RAB28-203ENST00000338176 UACAQ9BZF9 1416 aa34.99■■■■□ 3.19
RAB28-203ENST00000338176 ABCC2Q92887 1545 aa34.96■■■■□ 3.19
RAB28-203ENST00000338176 GOLGA3Q08378 1498 aa34.95■■■■□ 3.19
RAB28-203ENST00000338176 UHRF1BP1LA0JNW5 1464 aa34.94■■■■□ 3.18
RAB28-203ENST00000338176 ABCC10Q5T3U5 1492 aa34.94■■■■□ 3.18
RAB28-203ENST00000338176 FAM69CQ0P6D2 419 aa34.94■■■■□ 3.18
RAB28-203ENST00000338176 P3H3Q8IVL6 736 aa34.9■■■■□ 3.18
RAB28-203ENST00000338176 DIP2BQ9P265 1576 aa34.9■■■■□ 3.18
RAB28-203ENST00000338176 EHMT2Q96KQ7 1210 aa34.88■■■■□ 3.17
RAB28-203ENST00000338176 PLB1Q6P1J6 1458 aa34.88■■■■□ 3.17
RAB28-203ENST00000338176 KIF21BO75037 1637 aa34.86■■■■□ 3.17
RAB28-203ENST00000338176 RANGAP1P46060 587 aaPredicted RBP34.85■■■■□ 3.17
RAB28-203ENST00000338176 ASXL2Q76L83 1435 aa34.82■■■■□ 3.16
RAB28-203ENST00000338176 KDM5BQ9UGL1 1544 aa34.81■■■■□ 3.16
RAB28-203ENST00000338176 ZCCHC11Q5TAX3 1644 aaKnown RBP34.79■■■■□ 3.16
RAB28-203ENST00000338176 ABCA8O94911 1581 aa34.77■■■■□ 3.16
RAB28-203ENST00000338176 SAMD9Q5K651 1589 aa34.77■■■■□ 3.16
RAB28-203ENST00000338176 TSPOAP1O95153 1857 aa34.71■■■■□ 3.15
RAB28-203ENST00000338176 ARID3CA6NKF2 412 aa34.65■■■■□ 3.14
RAB28-203ENST00000338176 UBTFP17480 764 aaKnown RBP34.64■■■■□ 3.14
RAB28-203ENST00000338176 FHOD3Q2V2M9 1422 aa34.64■■■■□ 3.14
RAB28-203ENST00000338176 EPRSP07814 1512 aaKnown RBP34.6■■■■□ 3.13
RAB28-203ENST00000338176 GLI2P10070 1586 aa34.59■■■■□ 3.13
RAB28-203ENST00000338176 WDR7Q9Y4E6 1490 aa34.55■■■■□ 3.12
RAB28-203ENST00000338176 RAPGEF6Q8TEU7 1601 aa34.52■■■■□ 3.12
RAB28-203ENST00000338176 PPRC1Q5VV67 1664 aaKnown RBP34.52■■■■□ 3.12
RAB28-203ENST00000338176 ATP10BO94823 1461 aa34.51■■■■□ 3.12
RAB28-203ENST00000338176 EFCAB5A4FU69 1503 aa34.5■■■■□ 3.11
RAB28-203ENST00000338176 KCNH8Q96L42 1107 aa34.48■■■■□ 3.11
RAB28-203ENST00000338176 MAP3K4Q9Y6R4 1608 aa34.46■■■■□ 3.11
RAB28-203ENST00000338176 KDM6BO15054 1643 aa34.42■■■■□ 3.1
RAB28-203ENST00000338176 NUP153P49790 1475 aaKnown RBP34.42■■■■□ 3.1
RAB28-203ENST00000338176 ARHGAP35Q9NRY4 1499 aa34.38■■■■□ 3.09
RAB28-203ENST00000338176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.35■■■■□ 3.09
RAB28-203ENST00000338176 HNRNPUL2Q1KMD3 747 aaKnown RBP34.35■■■■□ 3.09
RAB28-203ENST00000338176 CD109Q6YHK3 1445 aa34.29■■■■□ 3.08
RAB28-203ENST00000338176 CFAP43Q8NDM7 1665 aa34.28■■■■□ 3.08
RAB28-203ENST00000338176 COL17A1Q9UMD9 1497 aaPredicted RBP34.26■■■■□ 3.08
RAB28-203ENST00000338176 TEX14Q8IWB6 1497 aa34.25■■■■□ 3.07
RAB28-203ENST00000338176 CDK13Q14004 1512 aaKnown RBP34.2■■■■□ 3.07
RAB28-203ENST00000338176 MAGI3Q5TCQ9 1506 aa34.2■■■■□ 3.06
RAB28-203ENST00000338176 ATP1B4Q9UN42 357 aaPredicted RBP34.19■■■■□ 3.06
RAB28-203ENST00000338176 FMN1Q68DA7 1419 aa34.19■■■■□ 3.06
RAB28-203ENST00000338176 ABCA9Q8IUA7 1624 aa34.15■■■■□ 3.06
RAB28-203ENST00000338176 PLEKHD1A6NEE1 506 aa34.13■■■■□ 3.05
RAB28-203ENST00000338176 HECW1Q76N89 1606 aa34.09■■■■□ 3.05
RAB28-203ENST00000338176 CLIP1P30622 1438 aa34.04■■■■□ 3.04
RAB28-203ENST00000338176 LRRIQ1Q96JM4 1722 aa34.03■■■■□ 3.04
RAB28-203ENST00000338176 AEBP2Q6ZN18 517 aaPredicted RBP34■■■■□ 3.03
RAB28-203ENST00000338176 PCF11O94913 1555 aaKnown RBP33.99■■■■□ 3.03
RAB28-203ENST00000338176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.99■■■■□ 3.03
RAB28-203ENST00000338176 TTC37Q6PGP7 1564 aa33.96■■■■□ 3.03
RAB28-203ENST00000338176 CASKIN1Q8WXD9 1431 aa33.92■■■■□ 3.02
RAB28-203ENST00000338176 ARAP3Q8WWN8 1544 aa33.91■■■■□ 3.02
RAB28-203ENST00000338176 LOC105371045A0A1W2PR82 267 aa33.89■■■■□ 3.02
RAB28-203ENST00000338176 KDM4FA0A1W2PPD8 638 aa33.88■■■■□ 3.01
RAB28-203ENST00000338176 NEO1Q92859 1461 aa33.87■■■■□ 3.01
RAB28-203ENST00000338176 KIF14Q15058 1648 aa33.86■■■■□ 3.01
RAB28-203ENST00000338176 CDK11AQ9UQ88 783 aaPredicted RBP33.85■■■■□ 3.01
RAB28-203ENST00000338176 RAPGEF3O95398 923 aa33.85■■■■□ 3.01
RAB28-203ENST00000338176 CEP162Q5TB80 1403 aa33.83■■■■□ 3.01
RAB28-203ENST00000338176 PHLDB1Q86UU1 1377 aa33.82■■■■□ 3.01
RAB28-203ENST00000338176 TROQ12816 1431 aaPredicted RBP33.82■■■■□ 3
RAB28-203ENST00000338176 FYCO1Q9BQS8 1478 aa33.81■■■■□ 3
RAB28-203ENST00000338176 FANCAO15360 1455 aa33.8■■■■□ 3
RAB28-203ENST00000338176 CCDC18Q5T9S5 1454 aa33.78■■■■□ 3
RAB28-203ENST00000338176 AKNAQ7Z591 1439 aa33.77■■■■□ 3
RAB28-203ENST00000338176 FRMPD1Q5SYB0 1578 aa33.76■■■■□ 3
RAB28-203ENST00000338176 PLCH2O75038 1416 aa33.74■■■□□ 2.99
RAB28-203ENST00000338176 ADGRL1O94910 1474 aa33.72■■■□□ 2.99
RAB28-203ENST00000338176 CFAP74Q9C0B2 1584 aa33.71■■■□□ 2.99
RAB28-203ENST00000338176 MYO5CQ9NQX4 1742 aa33.71■■■□□ 2.99
RAB28-203ENST00000338176 DENND4BO75064 1496 aaPredicted RBP33.67■■■□□ 2.98
RAB28-203ENST00000338176 RICTORQ6R327 1708 aa33.66■■■□□ 2.98
RAB28-203ENST00000338176 EFCAB2Q5VUJ9 269 aa33.6■■■□□ 2.97
RAB28-203ENST00000338176 SCAPERQ9BY12 1400 aa33.59■■■□□ 2.97
RAB28-203ENST00000338176 ARHGAP5Q13017 1502 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms