RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 GRIN2BQ13224 1484 aa8.88□□□□□ -0.99
PRPF4B-201ENST00000337659 ARHGAP35Q9NRY4 1499 aa8.88□□□□□ -0.99
PRPF4B-201ENST00000337659 VPS8Q8N3P4 1428 aa8.88□□□□□ -0.99
PRPF4B-201ENST00000337659 SNAPC4Q5SXM2 1469 aa8.88□□□□□ -0.99
PRPF4B-201ENST00000337659 ADCY10Q96PN6 1610 aa8.88□□□□□ -0.99
PRPF4B-201ENST00000337659 RAD54L2Q9Y4B4 1467 aa8.87□□□□□ -0.99
PRPF4B-201ENST00000337659 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
PRPF4B-201ENST00000337659 NUP160Q12769 1436 aa8.86□□□□□ -0.99
PRPF4B-201ENST00000337659 FYCO1Q9BQS8 1478 aa8.85□□□□□ -0.99
PRPF4B-201ENST00000337659 IQGAP2Q13576 1575 aa8.85□□□□□ -0.99
PRPF4B-201ENST00000337659 TIAM1Q13009 1591 aa8.84□□□□□ -0.99
PRPF4B-201ENST00000337659 CEP170Q5SW79 1584 aa8.84□□□□□ -0.99
PRPF4B-201ENST00000337659 KIAA0556O60303 1618 aa8.83□□□□□ -1
PRPF4B-201ENST00000337659 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
PRPF4B-201ENST00000337659 SYNJ2O15056 1496 aa8.81□□□□□ -1
PRPF4B-201ENST00000337659 CLIP1P30622 1438 aa8.8□□□□□ -1
PRPF4B-201ENST00000337659 CARMIL1Q5VZK9 1371 aa8.8□□□□□ -1
PRPF4B-201ENST00000337659 GRIN2AQ12879 1464 aa8.8□□□□□ -1
PRPF4B-201ENST00000337659 KIAA0586Q9BVV6 1533 aa8.79□□□□□ -1
PRPF4B-201ENST00000337659 CASKIN1Q8WXD9 1431 aa8.78□□□□□ -1
PRPF4B-201ENST00000337659 DISP1Q96F81 1524 aa8.78□□□□□ -1
PRPF4B-201ENST00000337659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.77□□□□□ -1.01
PRPF4B-201ENST00000337659 HECW1Q76N89 1606 aa8.77□□□□□ -1.01
PRPF4B-201ENST00000337659 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
PRPF4B-201ENST00000337659 RRBP1Q9P2E9 1410 aaKnown RBP8.76□□□□□ -1.01
PRPF4B-201ENST00000337659 ABCA8O94911 1581 aa8.76□□□□□ -1.01
PRPF4B-201ENST00000337659 OSCARQ8IYS5 282 aa8.75□□□□□ -1.01
PRPF4B-201ENST00000337659 KIF13AQ9H1H9 1805 aa8.75□□□□□ -1.01
PRPF4B-201ENST00000337659 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
PRPF4B-201ENST00000337659 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
PRPF4B-201ENST00000337659 EHBP1L1Q8N3D4 1523 aa8.72□□□□□ -1.01
PRPF4B-201ENST00000337659 CROCC2H7BZ55 1655 aa8.71□□□□□ -1.01
PRPF4B-201ENST00000337659 TCOF1Q13428 1488 aaKnown RBP8.71□□□□□ -1.02
PRPF4B-201ENST00000337659 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
PRPF4B-201ENST00000337659 FMN1Q68DA7 1419 aa8.69□□□□□ -1.02
PRPF4B-201ENST00000337659 KDM5BQ9UGL1 1544 aa8.69□□□□□ -1.02
PRPF4B-201ENST00000337659 GCC2Q8IWJ2 1684 aa8.69□□□□□ -1.02
PRPF4B-201ENST00000337659 LRRC9Q6ZRR7 1453 aa8.68□□□□□ -1.02
PRPF4B-201ENST00000337659 SUPT6HQ7KZ85 1726 aaKnown RBP8.68□□□□□ -1.02
PRPF4B-201ENST00000337659 MAPKBP1O60336 1514 aa8.68□□□□□ -1.02
PRPF4B-201ENST00000337659 UHRF1BP1LA0JNW5 1464 aa8.67□□□□□ -1.02
PRPF4B-201ENST00000337659 MAGI3Q5TCQ9 1506 aa8.66□□□□□ -1.02
PRPF4B-201ENST00000337659 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.02
PRPF4B-201ENST00000337659 AKNAQ7Z591 1439 aa8.64□□□□□ -1.03
PRPF4B-201ENST00000337659 ARAP3Q8WWN8 1544 aa8.63□□□□□ -1.03
PRPF4B-201ENST00000337659 ADGBQ8N7X0 1667 aa8.62□□□□□ -1.03
PRPF4B-201ENST00000337659 GLI2P10070 1586 aa8.62□□□□□ -1.03
PRPF4B-201ENST00000337659 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
PRPF4B-201ENST00000337659 TDRD9Q8NDG6 1382 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-201ENST00000337659 NUP153P49790 1475 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-201ENST00000337659 EPRSP07814 1512 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-201ENST00000337659 CDC42BPAQ5VT25 1732 aa8.59□□□□□ -1.03
PRPF4B-201ENST00000337659 PREX2Q70Z35 1606 aa8.59□□□□□ -1.03
PRPF4B-201ENST00000337659 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
PRPF4B-201ENST00000337659 DNMT1P26358 1616 aaKnown RBP8.59□□□□□ -1.03
PRPF4B-201ENST00000337659 BCORL1Q5H9F3 1711 aa8.58□□□□□ -1.04
PRPF4B-201ENST00000337659 ARHGEF5Q12774 1597 aa8.58□□□□□ -1.04
PRPF4B-201ENST00000337659 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
PRPF4B-201ENST00000337659 DIP2BQ9P265 1576 aa8.57□□□□□ -1.04
PRPF4B-201ENST00000337659 PPRC1Q5VV67 1664 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-201ENST00000337659 MIA2Q96PC5 1412 aa8.56□□□□□ -1.04
PRPF4B-201ENST00000337659 ABCC2Q92887 1545 aa8.56□□□□□ -1.04
PRPF4B-201ENST00000337659 PTPN23Q9H3S7 1636 aa8.55□□□□□ -1.04
PRPF4B-201ENST00000337659 SHANK2Q9UPX8 1470 aa8.54□□□□□ -1.04
PRPF4B-201ENST00000337659 ADGRL2O95490 1459 aa8.54□□□□□ -1.04
PRPF4B-201ENST00000337659 KDM5DQ9BY66 1539 aa8.54□□□□□ -1.04
PRPF4B-201ENST00000337659 CDC42BPBQ9Y5S2 1711 aa8.53□□□□□ -1.04
PRPF4B-201ENST00000337659 FHOD3Q2V2M9 1422 aa8.53□□□□□ -1.04
PRPF4B-201ENST00000337659 ZCCHC11Q5TAX3 1644 aaKnown RBP8.53□□□□□ -1.04
PRPF4B-201ENST00000337659 ABCA9Q8IUA7 1624 aa8.52□□□□□ -1.05
PRPF4B-201ENST00000337659 PLXNC1O60486 1568 aa8.52□□□□□ -1.05
PRPF4B-201ENST00000337659 HRCP23327 699 aa8.52□□□□□ -1.05
PRPF4B-201ENST00000337659 KIF14Q15058 1648 aa8.51□□□□□ -1.05
PRPF4B-201ENST00000337659 MAP3K4Q9Y6R4 1608 aa8.5□□□□□ -1.05
PRPF4B-201ENST00000337659 MYO5CQ9NQX4 1742 aa8.49□□□□□ -1.05
PRPF4B-201ENST00000337659 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
PRPF4B-201ENST00000337659 MYOM3Q5VTT5 1437 aa8.49□□□□□ -1.05
PRPF4B-201ENST00000337659 FGD6Q6ZV73 1430 aa8.48□□□□□ -1.05
PRPF4B-201ENST00000337659 WDR7Q9Y4E6 1490 aa8.48□□□□□ -1.05
PRPF4B-201ENST00000337659 DEPDC5O75140 1603 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 CLSPNQ9HAW4 1339 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 NEURL4Q96JN8 1562 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 CARMIL2Q6F5E8 1435 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 UNC13BO14795 1591 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 ERCC6L2Q5T890 1561 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 MAGI2Q86UL8 1455 aa8.47□□□□□ -1.05
PRPF4B-201ENST00000337659 TROQ12816 1431 aaPredicted RBP8.46□□□□□ -1.05
PRPF4B-201ENST00000337659 ROCK1Q13464 1354 aa8.46□□□□□ -1.06
PRPF4B-201ENST00000337659 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
PRPF4B-201ENST00000337659 CFAP74Q9C0B2 1584 aa8.45□□□□□ -1.06
PRPF4B-201ENST00000337659 CDK13Q14004 1512 aaKnown RBP8.45□□□□□ -1.06
PRPF4B-201ENST00000337659 HFM1A2PYH4 1435 aa8.45□□□□□ -1.06
PRPF4B-201ENST00000337659 ATP10BO94823 1461 aa8.45□□□□□ -1.06
PRPF4B-201ENST00000337659 EIF2AK4Q9P2K8 1649 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-201ENST00000337659 CCNB3Q8WWL7 1395 aa8.44□□□□□ -1.06
PRPF4B-201ENST00000337659 SAMD9LQ8IVG5 1584 aa8.44□□□□□ -1.06
PRPF4B-201ENST00000337659 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
PRPF4B-201ENST00000337659 TTC37Q6PGP7 1564 aa8.43□□□□□ -1.06
PRPF4B-201ENST00000337659 INO80Q9ULG1 1556 aaPredicted RBP8.43□□□□□ -1.06
PRPF4B-201ENST00000337659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms