RNA–Protein interactions for RNA: ENST00000334828.5

PGAM1-201, Transcript of phosphoglycerate mutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAM1, Length 1,830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1-201ENST00000334828 KIAA0586Q9BVV6 1533 aa30.27■■■□□ 2.44
PGAM1-201ENST00000334828 UBTFP17480 764 aaKnown RBP30.26■■■□□ 2.44
PGAM1-201ENST00000334828 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
PGAM1-201ENST00000334828 CLASP1Q7Z460 1538 aa30.2■■■□□ 2.43
PGAM1-201ENST00000334828 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
PGAM1-201ENST00000334828 TNIKQ9UKE5 1360 aa30.12■■■□□ 2.41
PGAM1-201ENST00000334828 IQGAP2Q13576 1575 aa30.12■■■□□ 2.41
PGAM1-201ENST00000334828 TRIM26Q12899 539 aaPredicted RBP30.1■■■□□ 2.41
PGAM1-201ENST00000334828 CTTNBP2Q8WZ74 1663 aa30.08■■■□□ 2.41
PGAM1-201ENST00000334828 HRCP23327 699 aa30.08■■■□□ 2.41
PGAM1-201ENST00000334828 SHROOM2Q13796 1616 aa30.01■■■□□ 2.39
PGAM1-201ENST00000334828 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.39
PGAM1-201ENST00000334828 PRG4Q92954 1404 aaPredicted RBP29.98■■■□□ 2.39
PGAM1-201ENST00000334828 DNAJC5Q9H3Z4 198 aa29.95■■■□□ 2.39
PGAM1-201ENST00000334828 CARMIL2Q6F5E8 1435 aa29.95■■■□□ 2.38
PGAM1-201ENST00000334828 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
PGAM1-201ENST00000334828 DISP1Q96F81 1524 aa29.88■■■□□ 2.37
PGAM1-201ENST00000334828 ARHGEF11O15085 1522 aa29.85■■■□□ 2.37
PGAM1-201ENST00000334828 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
PGAM1-201ENST00000334828 EFCAB5A4FU69 1503 aa29.84■■■□□ 2.37
PGAM1-201ENST00000334828 CLIP1P30622 1438 aa29.83■■■□□ 2.37
PGAM1-201ENST00000334828 SAMD9Q5K651 1589 aa29.8■■■□□ 2.36
PGAM1-201ENST00000334828 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
PGAM1-201ENST00000334828 ERCC6L2Q5T890 1561 aa29.8■■■□□ 2.36
PGAM1-201ENST00000334828 ARHGAP35Q9NRY4 1499 aa29.78■■■□□ 2.36
PGAM1-201ENST00000334828 P3H3Q8IVL6 736 aa29.78■■■□□ 2.36
PGAM1-201ENST00000334828 PTPRGP23470 1445 aa29.74■■■□□ 2.35
PGAM1-201ENST00000334828 RIMBP3CA6NJZ7 1639 aa29.73■■■□□ 2.35
PGAM1-201ENST00000334828 RIMBP3BA6NNM3 1639 aa29.73■■■□□ 2.35
PGAM1-201ENST00000334828 RIMBP3Q9UFD9 1639 aa29.73■■■□□ 2.35
PGAM1-201ENST00000334828 FHOD3Q2V2M9 1422 aa29.69■■■□□ 2.34
PGAM1-201ENST00000334828 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
PGAM1-201ENST00000334828 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
PGAM1-201ENST00000334828 CYB5RLQ6IPT4 315 aa29.61■■■□□ 2.33
PGAM1-201ENST00000334828 FMN1Q68DA7 1419 aa29.61■■■□□ 2.33
PGAM1-201ENST00000334828 UACAQ9BZF9 1416 aa29.54■■■□□ 2.32
PGAM1-201ENST00000334828 PLB1Q6P1J6 1458 aa29.49■■■□□ 2.31
PGAM1-201ENST00000334828 UHRF1BP1LA0JNW5 1464 aa29.48■■■□□ 2.31
PGAM1-201ENST00000334828 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
PGAM1-201ENST00000334828 ABCA8O94911 1581 aa29.47■■■□□ 2.31
PGAM1-201ENST00000334828 VPS8Q8N3P4 1428 aa29.44■■■□□ 2.3
PGAM1-201ENST00000334828 ABCC2Q92887 1545 aa29.43■■■□□ 2.3
PGAM1-201ENST00000334828 CASKIN1Q8WXD9 1431 aa29.42■■■□□ 2.3
PGAM1-201ENST00000334828 RAPGEF6Q8TEU7 1601 aa29.4■■■□□ 2.3
PGAM1-201ENST00000334828 NPM1P06748 294 aaKnown RBP eCLIP29.37■■■□□ 2.29
PGAM1-201ENST00000334828 ATP1B4Q9UN42 357 aaPredicted RBP29.36■■■□□ 2.29
PGAM1-201ENST00000334828 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
PGAM1-201ENST00000334828 ADCY10Q96PN6 1610 aa29.35■■■□□ 2.29
PGAM1-201ENST00000334828 NUP153P49790 1475 aaKnown RBP29.34■■■□□ 2.29
PGAM1-201ENST00000334828 KDM5BQ9UGL1 1544 aa29.32■■■□□ 2.28
PGAM1-201ENST00000334828 HECW1Q76N89 1606 aa29.32■■■□□ 2.28
PGAM1-201ENST00000334828 PCF11O94913 1555 aaKnown RBP29.3■■■□□ 2.28
PGAM1-201ENST00000334828 ATP10BO94823 1461 aa29.27■■■□□ 2.28
PGAM1-201ENST00000334828 EPRSP07814 1512 aaKnown RBP29.25■■■□□ 2.27
PGAM1-201ENST00000334828 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
PGAM1-201ENST00000334828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.24■■■□□ 2.27
PGAM1-201ENST00000334828 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
PGAM1-201ENST00000334828 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
PGAM1-201ENST00000334828 ARID3CA6NKF2 412 aa29.23■■■□□ 2.27
PGAM1-201ENST00000334828 CDK11AQ9UQ88 783 aaPredicted RBP29.2■■■□□ 2.27
PGAM1-201ENST00000334828 APLP2Q06481 763 aa29.19■■■□□ 2.26
PGAM1-201ENST00000334828 ZCCHC11Q5TAX3 1644 aaKnown RBP29.16■■■□□ 2.26
PGAM1-201ENST00000334828 PLEKHD1A6NEE1 506 aa29.15■■■□□ 2.26
PGAM1-201ENST00000334828 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
PGAM1-201ENST00000334828 MAP3K1Q13233 1512 aa29.13■■■□□ 2.25
PGAM1-201ENST00000334828 MAPKBP1O60336 1514 aa29.12■■■□□ 2.25
PGAM1-201ENST00000334828 ASXL2Q76L83 1435 aa29.1■■■□□ 2.25
PGAM1-201ENST00000334828 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
PGAM1-201ENST00000334828 WDR7Q9Y4E6 1490 aa29.05■■■□□ 2.24
PGAM1-201ENST00000334828 TIAM1Q13009 1591 aa29.04■■■□□ 2.24
PGAM1-201ENST00000334828 TROQ12816 1431 aaPredicted RBP29.02■■■□□ 2.24
PGAM1-201ENST00000334828 MTUS2Q5JR59 1369 aa29.02■■■□□ 2.24
PGAM1-201ENST00000334828 CFAP43Q8NDM7 1665 aa28.98■■■□□ 2.23
PGAM1-201ENST00000334828 KCNH8Q96L42 1107 aa28.97■■■□□ 2.23
PGAM1-201ENST00000334828 LRRC9Q6ZRR7 1453 aa28.96■■■□□ 2.23
PGAM1-201ENST00000334828 KANK4Q5T7N3 995 aaPredicted RBP28.95■■■□□ 2.23
PGAM1-201ENST00000334828 MAGI3Q5TCQ9 1506 aa28.94■■■□□ 2.22
PGAM1-201ENST00000334828 ABCC10Q5T3U5 1492 aa28.93■■■□□ 2.22
PGAM1-201ENST00000334828 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
PGAM1-201ENST00000334828 FAM69CQ0P6D2 419 aa28.88■■■□□ 2.21
PGAM1-201ENST00000334828 GLI2P10070 1586 aa28.84■■■□□ 2.21
PGAM1-201ENST00000334828 KIF14Q15058 1648 aa28.83■■■□□ 2.21
PGAM1-201ENST00000334828 DIP2BQ9P265 1576 aa28.83■■■□□ 2.21
PGAM1-201ENST00000334828 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
PGAM1-201ENST00000334828 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
PGAM1-201ENST00000334828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.78■■■□□ 2.2
PGAM1-201ENST00000334828 NCOA2Q15596 1464 aa28.76■■■□□ 2.2
PGAM1-201ENST00000334828 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.19
PGAM1-201ENST00000334828 SUPT6HQ7KZ85 1726 aaKnown RBP28.76■■■□□ 2.19
PGAM1-201ENST00000334828 CD109Q6YHK3 1445 aa28.75■■■□□ 2.19
PGAM1-201ENST00000334828 CCNB3Q8WWL7 1395 aa28.74■■■□□ 2.19
PGAM1-201ENST00000334828 PLCH2O75038 1416 aa28.7■■■□□ 2.18
PGAM1-201ENST00000334828 TTC37Q6PGP7 1564 aa28.7■■■□□ 2.18
PGAM1-201ENST00000334828 GPATCH8Q9UKJ3 1502 aaKnown RBP28.67■■■□□ 2.18
PGAM1-201ENST00000334828 KIF13AQ9H1H9 1805 aa28.67■■■□□ 2.18
PGAM1-201ENST00000334828 MAP3K4Q9Y6R4 1608 aa28.67■■■□□ 2.18
PGAM1-201ENST00000334828 ARAP3Q8WWN8 1544 aa28.64■■■□□ 2.18
PGAM1-201ENST00000334828 CFDP1Q9UEE9 299 aaPredicted RBP28.64■■■□□ 2.17
PGAM1-201ENST00000334828 PHLDB1Q86UU1 1377 aa28.63■■■□□ 2.17
PGAM1-201ENST00000334828 EFCAB2Q5VUJ9 269 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms