RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
HDAC6-201ENST00000334136 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
HDAC6-201ENST00000334136 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
HDAC6-201ENST00000334136 MYT1Q01538 1121 aa17.34■□□□□ 0.37
HDAC6-201ENST00000334136 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-201ENST00000334136 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
HDAC6-201ENST00000334136 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
HDAC6-201ENST00000334136 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
HDAC6-201ENST00000334136 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
HDAC6-201ENST00000334136 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
HDAC6-201ENST00000334136 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
HDAC6-201ENST00000334136 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
HDAC6-201ENST00000334136 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-201ENST00000334136 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
HDAC6-201ENST00000334136 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
HDAC6-201ENST00000334136 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
HDAC6-201ENST00000334136 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
HDAC6-201ENST00000334136 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
HDAC6-201ENST00000334136 WDR62O43379 1518 aa17.14■□□□□ 0.33
HDAC6-201ENST00000334136 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
HDAC6-201ENST00000334136 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
HDAC6-201ENST00000334136 PRXQ9BXM0 1461 aa17.13■□□□□ 0.33
HDAC6-201ENST00000334136 PTPRGP23470 1445 aa17.12■□□□□ 0.33
HDAC6-201ENST00000334136 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-201ENST00000334136 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
HDAC6-201ENST00000334136 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
HDAC6-201ENST00000334136 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
HDAC6-201ENST00000334136 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
HDAC6-201ENST00000334136 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
HDAC6-201ENST00000334136 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-201ENST00000334136 KIF21BO75037 1637 aa17.05■□□□□ 0.32
HDAC6-201ENST00000334136 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-201ENST00000334136 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
HDAC6-201ENST00000334136 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
HDAC6-201ENST00000334136 PRG4Q92954 1404 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-201ENST00000334136 GRIN2AQ12879 1464 aa17.02■□□□□ 0.31
HDAC6-201ENST00000334136 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
HDAC6-201ENST00000334136 CUL7Q14999 1698 aa17■□□□□ 0.31
HDAC6-201ENST00000334136 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
HDAC6-201ENST00000334136 NEFLP07196 543 aa16.99■□□□□ 0.31
HDAC6-201ENST00000334136 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
HDAC6-201ENST00000334136 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
HDAC6-201ENST00000334136 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
HDAC6-201ENST00000334136 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-201ENST00000334136 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
HDAC6-201ENST00000334136 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
HDAC6-201ENST00000334136 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
HDAC6-201ENST00000334136 IQGAP2Q13576 1575 aa16.88■□□□□ 0.29
HDAC6-201ENST00000334136 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
HDAC6-201ENST00000334136 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
HDAC6-201ENST00000334136 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
HDAC6-201ENST00000334136 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
HDAC6-201ENST00000334136 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
HDAC6-201ENST00000334136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.295e-7■■■■□ 20.8
HDAC6-201ENST00000334136 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.28
HDAC6-201ENST00000334136 ARAP1Q96P48 1450 aa16.83■□□□□ 0.28
HDAC6-201ENST00000334136 ADAMTS12P58397 1594 aa16.82■□□□□ 0.28
HDAC6-201ENST00000334136 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
HDAC6-201ENST00000334136 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
HDAC6-201ENST00000334136 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
HDAC6-201ENST00000334136 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
HDAC6-201ENST00000334136 WDR97A6NE52 1622 aa16.77■□□□□ 0.27
HDAC6-201ENST00000334136 FAM69CQ0P6D2 419 aa16.77■□□□□ 0.27
HDAC6-201ENST00000334136 PBRM1Q86U86 1689 aa16.76■□□□□ 0.27
HDAC6-201ENST00000334136 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-201ENST00000334136 BCANQ96GW7 911 aa16.75■□□□□ 0.27
HDAC6-201ENST00000334136 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-201ENST00000334136 UACAQ9BZF9 1416 aa16.74■□□□□ 0.27
HDAC6-201ENST00000334136 NUP160Q12769 1436 aa16.7■□□□□ 0.26
HDAC6-201ENST00000334136 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC6-201ENST00000334136 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
HDAC6-201ENST00000334136 PLB1Q6P1J6 1458 aa16.68■□□□□ 0.26
HDAC6-201ENST00000334136 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
HDAC6-201ENST00000334136 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
HDAC6-201ENST00000334136 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
HDAC6-201ENST00000334136 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
HDAC6-201ENST00000334136 RSPH4AQ5TD94 716 aa16.64■□□□□ 0.25
HDAC6-201ENST00000334136 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
HDAC6-201ENST00000334136 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
HDAC6-201ENST00000334136 MLECQ14165 292 aa16.6■□□□□ 0.25
HDAC6-201ENST00000334136 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
HDAC6-201ENST00000334136 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-201ENST00000334136 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
HDAC6-201ENST00000334136 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
HDAC6-201ENST00000334136 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
HDAC6-201ENST00000334136 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.25
HDAC6-201ENST00000334136 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
HDAC6-201ENST00000334136 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
HDAC6-201ENST00000334136 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
HDAC6-201ENST00000334136 GGT6Q6P531 493 aa16.57■□□□□ 0.24
HDAC6-201ENST00000334136 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-201ENST00000334136 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
HDAC6-201ENST00000334136 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
HDAC6-201ENST00000334136 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
HDAC6-201ENST00000334136 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
HDAC6-201ENST00000334136 PHLDB1Q86UU1 1377 aa16.52■□□□□ 0.24
HDAC6-201ENST00000334136 KIAA0556O60303 1618 aa16.52■□□□□ 0.23
HDAC6-201ENST00000334136 CHD1O14646 1710 aa16.52■□□□□ 0.23
HDAC6-201ENST00000334136 KIF3BO15066 747 aa16.51■□□□□ 0.23
HDAC6-201ENST00000334136 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms