RNA–Protein interactions for RNA: ENST00000332598.6

TMED9-201, Transcript of transmembrane p24 trafficking protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED9, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-201ENST00000332598 SHROOM2Q13796 1616 aa28.7■■■□□ 2.19
TMED9-201ENST00000332598 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
TMED9-201ENST00000332598 KIAA0586Q9BVV6 1533 aa28.65■■■□□ 2.18
TMED9-201ENST00000332598 RAPGEF2Q9Y4G8 1499 aa28.57■■■□□ 2.16
TMED9-201ENST00000332598 TRHP20396 242 aaPredicted RBP28.49■■■□□ 2.15
TMED9-201ENST00000332598 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
TMED9-201ENST00000332598 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
TMED9-201ENST00000332598 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
TMED9-201ENST00000332598 IQGAP2Q13576 1575 aa28.41■■■□□ 2.14
TMED9-201ENST00000332598 TTBK1Q5TCY1 1321 aaPredicted RBP28.35■■■□□ 2.13
TMED9-201ENST00000332598 FAM9AQ8IZU1 332 aaPredicted RBP28.34■■■□□ 2.13
TMED9-201ENST00000332598 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
TMED9-201ENST00000332598 PTPRGP23470 1445 aa28.31■■■□□ 2.12
TMED9-201ENST00000332598 EEA1Q15075 1411 aa28.29■■■□□ 2.12
TMED9-201ENST00000332598 DISP1Q96F81 1524 aa28.29■■■□□ 2.12
TMED9-201ENST00000332598 TNIKQ9UKE5 1360 aa28.29■■■□□ 2.12
TMED9-201ENST00000332598 UGGT2Q9NYU1 1516 aa28.26■■■□□ 2.12
TMED9-201ENST00000332598 NPM1P06748 294 aaKnown RBP eCLIP28.21■■■□□ 2.113e-6■■□□□ 14.4
TMED9-201ENST00000332598 ADCY10Q96PN6 1610 aa28.2■■■□□ 2.11
TMED9-201ENST00000332598 CTTNBP2Q8WZ74 1663 aa28.18■■■□□ 2.1
TMED9-201ENST00000332598 KIAA0556O60303 1618 aa28.13■■■□□ 2.09
TMED9-201ENST00000332598 GOLGA3Q08378 1498 aa28.09■■■□□ 2.09
TMED9-201ENST00000332598 UACAQ9BZF9 1416 aa28.08■■■□□ 2.09
TMED9-201ENST00000332598 MAPKBP1O60336 1514 aa28.05■■■□□ 2.08
TMED9-201ENST00000332598 P3H3Q8IVL6 736 aa28.04■■■□□ 2.08
TMED9-201ENST00000332598 ABCC2Q92887 1545 aa28.04■■■□□ 2.08
TMED9-201ENST00000332598 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
TMED9-201ENST00000332598 EHMT2Q96KQ7 1210 aa28.03■■■□□ 2.08
TMED9-201ENST00000332598 RANGAP1P46060 587 aaPredicted RBP28.01■■■□□ 2.07
TMED9-201ENST00000332598 FAM69CQ0P6D2 419 aa28.01■■■□□ 2.07
TMED9-201ENST00000332598 KIF21BO75037 1637 aa27.99■■■□□ 2.07
TMED9-201ENST00000332598 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
TMED9-201ENST00000332598 PLB1Q6P1J6 1458 aa27.98■■■□□ 2.07
TMED9-201ENST00000332598 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
TMED9-201ENST00000332598 KIF13AQ9H1H9 1805 aa27.92■■■□□ 2.06
TMED9-201ENST00000332598 ASXL2Q76L83 1435 aa27.91■■■□□ 2.06
TMED9-201ENST00000332598 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
TMED9-201ENST00000332598 DIP2BQ9P265 1576 aa27.89■■■□□ 2.06
TMED9-201ENST00000332598 SAMD9Q5K651 1589 aa27.87■■■□□ 2.05
TMED9-201ENST00000332598 ABCA8O94911 1581 aa27.86■■■□□ 2.05
TMED9-201ENST00000332598 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
TMED9-201ENST00000332598 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
TMED9-201ENST00000332598 FHOD3Q2V2M9 1422 aa27.8■■■□□ 2.04
TMED9-201ENST00000332598 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
TMED9-201ENST00000332598 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
TMED9-201ENST00000332598 EFCAB5A4FU69 1503 aa27.7■■■□□ 2.03
TMED9-201ENST00000332598 ATP10BO94823 1461 aa27.7■■■□□ 2.02
TMED9-201ENST00000332598 GLI2P10070 1586 aa27.69■■■□□ 2.02
TMED9-201ENST00000332598 KCNH8Q96L42 1107 aa27.69■■■□□ 2.02
TMED9-201ENST00000332598 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
TMED9-201ENST00000332598 TSPOAP1O95153 1857 aa27.64■■■□□ 2.01
TMED9-201ENST00000332598 NUP153P49790 1475 aaKnown RBP27.62■■■□□ 2.01
TMED9-201ENST00000332598 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
TMED9-201ENST00000332598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.62■■■□□ 2.01
TMED9-201ENST00000332598 HNRNPUL2Q1KMD3 747 aaKnown RBP27.62■■■□□ 2.01
TMED9-201ENST00000332598 MAP3K4Q9Y6R4 1608 aa27.55■■■□□ 2
TMED9-201ENST00000332598 PPRC1Q5VV67 1664 aaKnown RBP27.54■■■□□ 2
TMED9-201ENST00000332598 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
TMED9-201ENST00000332598 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
TMED9-201ENST00000332598 ATP1B4Q9UN42 357 aaPredicted RBP27.5■■□□□ 1.99
TMED9-201ENST00000332598 KDM6BO15054 1643 aa27.5■■□□□ 1.99
TMED9-201ENST00000332598 PLEKHD1A6NEE1 506 aa27.46■■□□□ 1.99
TMED9-201ENST00000332598 TEX14Q8IWB6 1497 aa27.46■■□□□ 1.99
TMED9-201ENST00000332598 COL17A1Q9UMD9 1497 aaPredicted RBP27.43■■□□□ 1.98
TMED9-201ENST00000332598 CDK13Q14004 1512 aaKnown RBP27.42■■□□□ 1.98
TMED9-201ENST00000332598 MAGI3Q5TCQ9 1506 aa27.42■■□□□ 1.98
TMED9-201ENST00000332598 CFAP43Q8NDM7 1665 aa27.4■■□□□ 1.98
TMED9-201ENST00000332598 CLIP1P30622 1438 aa27.39■■□□□ 1.98
TMED9-201ENST00000332598 ABCA9Q8IUA7 1624 aa27.35■■□□□ 1.97
TMED9-201ENST00000332598 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
TMED9-201ENST00000332598 HECW1Q76N89 1606 aa27.33■■□□□ 1.97
TMED9-201ENST00000332598 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
TMED9-201ENST00000332598 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
TMED9-201ENST00000332598 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
TMED9-201ENST00000332598 PCF11O94913 1555 aaKnown RBP27.24■■□□□ 1.95
TMED9-201ENST00000332598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.24■■□□□ 1.952e-7■■□□□ 12.2
TMED9-201ENST00000332598 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
TMED9-201ENST00000332598 ARAP3Q8WWN8 1544 aa27.2■■□□□ 1.94
TMED9-201ENST00000332598 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
TMED9-201ENST00000332598 LRRIQ1Q96JM4 1722 aa27.19■■□□□ 1.94
TMED9-201ENST00000332598 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
TMED9-201ENST00000332598 NEO1Q92859 1461 aa27.18■■□□□ 1.94
TMED9-201ENST00000332598 FYCO1Q9BQS8 1478 aa27.18■■□□□ 1.94
TMED9-201ENST00000332598 TROQ12816 1431 aaPredicted RBP27.17■■□□□ 1.94
TMED9-201ENST00000332598 RAPGEF3O95398 923 aa27.16■■□□□ 1.94
TMED9-201ENST00000332598 CCDC18Q5T9S5 1454 aa27.15■■□□□ 1.94
TMED9-201ENST00000332598 FANCAO15360 1455 aa27.12■■□□□ 1.93
TMED9-201ENST00000332598 PLCH2O75038 1416 aa27.11■■□□□ 1.93
TMED9-201ENST00000332598 AKNAQ7Z591 1439 aa27.1■■□□□ 1.93
TMED9-201ENST00000332598 KDM4FA0A1W2PPD8 638 aa27.1■■□□□ 1.93
TMED9-201ENST00000332598 KIF14Q15058 1648 aa27.1■■□□□ 1.93
TMED9-201ENST00000332598 EFCAB2Q5VUJ9 269 aa27.03■■□□□ 1.92
TMED9-201ENST00000332598 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
TMED9-201ENST00000332598 FRMPD1Q5SYB0 1578 aa26.99■■□□□ 1.91
TMED9-201ENST00000332598 CFAP74Q9C0B2 1584 aa26.99■■□□□ 1.91
TMED9-201ENST00000332598 SCAPERQ9BY12 1400 aa26.97■■□□□ 1.91
TMED9-201ENST00000332598 ADGRL1O94910 1474 aa26.96■■□□□ 1.91
TMED9-201ENST00000332598 MYO5CQ9NQX4 1742 aa26.95■■□□□ 1.9
TMED9-201ENST00000332598 ARHGAP5Q13017 1502 aa26.94■■□□□ 1.9
TMED9-201ENST00000332598 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms