RNA–Protein interactions for RNA: ENST00000332598.6

TMED9-201, Transcript of transmembrane p24 trafficking protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED9, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-201ENST00000332598 NISCHQ9Y2I1 1504 aa41.32■■■■■ 4.2
TMED9-201ENST00000332598 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
TMED9-201ENST00000332598 ABCC9O60706 1549 aa36.27■■■■□ 3.4
TMED9-201ENST00000332598 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
TMED9-201ENST00000332598 RB1CC1Q8TDY2 1594 aa34.69■■■■□ 3.14
TMED9-201ENST00000332598 NACADO15069 1562 aa34.61■■■■□ 3.13
TMED9-201ENST00000332598 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
TMED9-201ENST00000332598 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
TMED9-201ENST00000332598 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
TMED9-201ENST00000332598 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.02
TMED9-201ENST00000332598 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
TMED9-201ENST00000332598 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
TMED9-201ENST00000332598 DNAJC5BQ9UF47 199 aa33.57■■■□□ 2.97
TMED9-201ENST00000332598 SCRIBQ14160 1630 aa33.57■■■□□ 2.96
TMED9-201ENST00000332598 SHROOM4Q9ULL8 1493 aa33.23■■■□□ 2.91
TMED9-201ENST00000332598 EIF4G1Q04637 1599 aaKnown RBP32.81■■■□□ 2.84
TMED9-201ENST00000332598 CC2D2AQ9P2K1 1620 aa32.73■■■□□ 2.83
TMED9-201ENST00000332598 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
TMED9-201ENST00000332598 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
TMED9-201ENST00000332598 NCAPD3P42695 1498 aa32■■■□□ 2.71
TMED9-201ENST00000332598 ATAD2BQ9ULI0 1458 aa32■■■□□ 2.71
TMED9-201ENST00000332598 BAZ1AQ9NRL2 1556 aaPredicted RBP32■■■□□ 2.71
TMED9-201ENST00000332598 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
TMED9-201ENST00000332598 MROH2BQ7Z745 1585 aa31.87■■■□□ 2.69
TMED9-201ENST00000332598 HMGXB3Q12766 1538 aa31.76■■■□□ 2.67
TMED9-201ENST00000332598 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
TMED9-201ENST00000332598 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.66
TMED9-201ENST00000332598 WIZO95785 1651 aa31.48■■■□□ 2.63
TMED9-201ENST00000332598 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
TMED9-201ENST00000332598 NESP48681 1621 aa31.34■■■□□ 2.61
TMED9-201ENST00000332598 ERCC6Q03468 1493 aa31.24■■■□□ 2.59
TMED9-201ENST00000332598 LAMC3Q9Y6N6 1575 aa31.12■■■□□ 2.57
TMED9-201ENST00000332598 TOP2AP11388 1531 aaKnown RBP31.11■■■□□ 2.57
TMED9-201ENST00000332598 CADPSQ9ULU8 1353 aa31.08■■■□□ 2.57
TMED9-201ENST00000332598 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
TMED9-201ENST00000332598 CUX2O14529 1486 aa30.93■■■□□ 2.54
TMED9-201ENST00000332598 CFTRP13569 1480 aa30.84■■■□□ 2.53
TMED9-201ENST00000332598 KIF21AQ7Z4S6 1674 aa30.83■■■□□ 2.53
TMED9-201ENST00000332598 CCDC88BA6NC98 1476 aa30.81■■■□□ 2.52
TMED9-201ENST00000332598 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
TMED9-201ENST00000332598 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
TMED9-201ENST00000332598 CEP164Q9UPV0 1460 aa30.67■■■□□ 2.5
TMED9-201ENST00000332598 MRC2Q9UBG0 1479 aa30.65■■■□□ 2.5
TMED9-201ENST00000332598 SUPT5HO00267 1087 aaKnown RBP30.62■■■□□ 2.49
TMED9-201ENST00000332598 WDR62O43379 1518 aa30.53■■■□□ 2.48
TMED9-201ENST00000332598 DNAJC5Q9H3Z4 198 aa30.43■■■□□ 2.46
TMED9-201ENST00000332598 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
TMED9-201ENST00000332598 PRDM2Q13029 1718 aa30.39■■■□□ 2.45
TMED9-201ENST00000332598 TOPBP1Q92547 1522 aa30.18■■■□□ 2.42
TMED9-201ENST00000332598 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
TMED9-201ENST00000332598 DNMBPQ6XZF7 1577 aa30.08■■■□□ 2.41
TMED9-201ENST00000332598 IFT140Q96RY7 1462 aa30.02■■■□□ 2.4
TMED9-201ENST00000332598 ZNF608Q9ULD9 1512 aaPredicted RBP29.97■■■□□ 2.39
TMED9-201ENST00000332598 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
TMED9-201ENST00000332598 CUX1P39880 1505 aa29.9■■■□□ 2.38
TMED9-201ENST00000332598 RAD54L2Q9Y4B4 1467 aa29.84■■■□□ 2.37
TMED9-201ENST00000332598 TARBP1Q13395 1621 aaKnown RBP29.84■■■□□ 2.37
TMED9-201ENST00000332598 SOGA1O94964 1423 aa29.83■■■□□ 2.37
TMED9-201ENST00000332598 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
TMED9-201ENST00000332598 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.362e-7■■■■■ 26.8
TMED9-201ENST00000332598 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
TMED9-201ENST00000332598 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
TMED9-201ENST00000332598 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
TMED9-201ENST00000332598 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
TMED9-201ENST00000332598 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
TMED9-201ENST00000332598 TOP2BQ02880 1626 aa29.54■■■□□ 2.32
TMED9-201ENST00000332598 FBLN2P98095 1184 aa29.53■■■□□ 2.32
TMED9-201ENST00000332598 ABCA10Q8WWZ4 1543 aa29.5■■■□□ 2.31
TMED9-201ENST00000332598 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
TMED9-201ENST00000332598 BIVM-ERCC5R4GMW8 1640 aa29.5■■■□□ 2.31
TMED9-201ENST00000332598 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
TMED9-201ENST00000332598 SNAPC4Q5SXM2 1469 aa29.46■■■□□ 2.31
TMED9-201ENST00000332598 GAPVD1Q14C86 1478 aa29.45■■■□□ 2.31
TMED9-201ENST00000332598 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
TMED9-201ENST00000332598 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
TMED9-201ENST00000332598 CHD1O14646 1710 aa29.37■■■□□ 2.29
TMED9-201ENST00000332598 ABCA5Q8WWZ7 1642 aa29.36■■■□□ 2.29
TMED9-201ENST00000332598 PBRM1Q86U86 1689 aa29.29■■■□□ 2.28
TMED9-201ENST00000332598 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
TMED9-201ENST00000332598 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
TMED9-201ENST00000332598 ARHGEF11O15085 1522 aa29.18■■■□□ 2.26
TMED9-201ENST00000332598 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
TMED9-201ENST00000332598 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
TMED9-201ENST00000332598 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
TMED9-201ENST00000332598 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
TMED9-201ENST00000332598 FHAD1B1AJZ9 1412 aa29.1■■■□□ 2.25
TMED9-201ENST00000332598 ADAMTS12P58397 1594 aa29.1■■■□□ 2.25
TMED9-201ENST00000332598 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
TMED9-201ENST00000332598 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
TMED9-201ENST00000332598 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
TMED9-201ENST00000332598 CYB5RLQ6IPT4 315 aa29.03■■■□□ 2.24
TMED9-201ENST00000332598 IGF1RP08069 1367 aa29■■■□□ 2.23
TMED9-201ENST00000332598 NUP160Q12769 1436 aa28.96■■■□□ 2.23
TMED9-201ENST00000332598 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
TMED9-201ENST00000332598 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
TMED9-201ENST00000332598 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
TMED9-201ENST00000332598 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
TMED9-201ENST00000332598 CUL7Q14999 1698 aa28.76■■■□□ 2.19
TMED9-201ENST00000332598 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
TMED9-201ENST00000332598 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms