RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 CUL7Q14999 1698 aa40.56■■■■■ 4.08
TMEM54-201ENST00000329151 IGF1RP08069 1367 aa40.48■■■■■ 4.07
TMEM54-201ENST00000329151 NPM1P06748 294 aaKnown RBP eCLIP40.43■■■■■ 4.06
TMEM54-201ENST00000329151 KIAA0586Q9BVV6 1533 aa40.42■■■■■ 4.06
TMEM54-201ENST00000329151 KIF13AQ9H1H9 1805 aa40.31■■■■■ 4.04
TMEM54-201ENST00000329151 CARMIL1Q5VZK9 1371 aa40.3■■■■■ 4.04
TMEM54-201ENST00000329151 AEBP2Q6ZN18 517 aaPredicted RBP40.29■■■■■ 4.04
TMEM54-201ENST00000329151 ADCY10Q96PN6 1610 aa40.19■■■■■ 4.02
TMEM54-201ENST00000329151 FAM69CQ0P6D2 419 aa40.16■■■■■ 4.02
TMEM54-201ENST00000329151 MAPKBP1O60336 1514 aa40.16■■■■■ 4.02
TMEM54-201ENST00000329151 CARMIL2Q6F5E8 1435 aa40.14■■■■■ 4.02
TMEM54-201ENST00000329151 TTBK1Q5TCY1 1321 aaPredicted RBP40.13■■■■■ 4.01
TMEM54-201ENST00000329151 ABCC10Q5T3U5 1492 aa40.11■■■■■ 4.01
TMEM54-201ENST00000329151 PTPRGP23470 1445 aa40.09■■■■■ 4.01
TMEM54-201ENST00000329151 IQGAP2Q13576 1575 aa40.09■■■■■ 4.01
TMEM54-201ENST00000329151 DIP2BQ9P265 1576 aa40.02■■■■■ 4
TMEM54-201ENST00000329151 TNIKQ9UKE5 1360 aa40.01■■■■■ 4
TMEM54-201ENST00000329151 RAPGEF2Q9Y4G8 1499 aa39.95■■■■□ 3.99
TMEM54-201ENST00000329151 TSPOAP1O95153 1857 aa39.9■■■■□ 3.98
TMEM54-201ENST00000329151 ABCC2Q92887 1545 aa39.84■■■■□ 3.97
TMEM54-201ENST00000329151 KDM6BO15054 1643 aa39.77■■■■□ 3.96
TMEM54-201ENST00000329151 DISP1Q96F81 1524 aa39.77■■■■□ 3.96
TMEM54-201ENST00000329151 UACAQ9BZF9 1416 aa39.76■■■■□ 3.96
TMEM54-201ENST00000329151 UGGT2Q9NYU1 1516 aa39.75■■■■□ 3.95
TMEM54-201ENST00000329151 UHRF1BP1LA0JNW5 1464 aa39.74■■■■□ 3.95
TMEM54-201ENST00000329151 PLB1Q6P1J6 1458 aa39.73■■■■□ 3.95
TMEM54-201ENST00000329151 ASXL2Q76L83 1435 aa39.71■■■■□ 3.95
TMEM54-201ENST00000329151 CTTNBP2Q8WZ74 1663 aa39.7■■■■□ 3.95
TMEM54-201ENST00000329151 KIAA0556O60303 1618 aa39.69■■■■□ 3.94
TMEM54-201ENST00000329151 GLI2P10070 1586 aa39.57■■■■□ 3.92
TMEM54-201ENST00000329151 GOLGA3Q08378 1498 aa39.56■■■■□ 3.92
TMEM54-201ENST00000329151 KDM5BQ9UGL1 1544 aa39.55■■■■□ 3.92
TMEM54-201ENST00000329151 ZCCHC11Q5TAX3 1644 aaKnown RBP39.54■■■■□ 3.92
TMEM54-201ENST00000329151 FAM9AQ8IZU1 332 aaPredicted RBP39.46■■■■□ 3.91
TMEM54-201ENST00000329151 PRXQ9BXM0 1461 aa39.44■■■■□ 3.9
TMEM54-201ENST00000329151 EPRSP07814 1512 aaKnown RBP39.44■■■■□ 3.9
TMEM54-201ENST00000329151 PPRC1Q5VV67 1664 aaKnown RBP39.42■■■■□ 3.9
TMEM54-201ENST00000329151 TEX14Q8IWB6 1497 aa39.37■■■■□ 3.89
TMEM54-201ENST00000329151 MAP3K4Q9Y6R4 1608 aa39.37■■■■□ 3.89
TMEM54-201ENST00000329151 WDR7Q9Y4E6 1490 aa39.34■■■■□ 3.89
TMEM54-201ENST00000329151 ABCA8O94911 1581 aa39.27■■■■□ 3.88
TMEM54-201ENST00000329151 CSRNP3Q8WYN3 585 aa39.24■■■■□ 3.87
TMEM54-201ENST00000329151 KCNH8Q96L42 1107 aa39.21■■■■□ 3.87
TMEM54-201ENST00000329151 KDM4FA0A1W2PPD8 638 aa39.2■■■■□ 3.87
TMEM54-201ENST00000329151 P3H3Q8IVL6 736 aa39.18■■■■□ 3.86
TMEM54-201ENST00000329151 CFAP43Q8NDM7 1665 aa39.16■■■■□ 3.86
TMEM54-201ENST00000329151 EEA1Q15075 1411 aa39.12■■■■□ 3.85
TMEM54-201ENST00000329151 CD109Q6YHK3 1445 aa39.12■■■■□ 3.85
TMEM54-201ENST00000329151 ARID3CA6NKF2 412 aa39.08■■■■□ 3.85
TMEM54-201ENST00000329151 COL17A1Q9UMD9 1497 aaPredicted RBP39.08■■■■□ 3.85
TMEM54-201ENST00000329151 MAGI3Q5TCQ9 1506 aa39.04■■■■□ 3.84
TMEM54-201ENST00000329151 SAMD9Q5K651 1589 aa39.02■■■■□ 3.84
TMEM54-201ENST00000329151 ADGRL1O94910 1474 aa39■■■■□ 3.83
TMEM54-201ENST00000329151 RANGAP1P46060 587 aaPredicted RBP38.99■■■■□ 3.83
TMEM54-201ENST00000329151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.96■■■■□ 3.83
TMEM54-201ENST00000329151 HNRNPUL2Q1KMD3 747 aaKnown RBP38.96■■■■□ 3.83
TMEM54-201ENST00000329151 RAPGEF6Q8TEU7 1601 aa38.95■■■■□ 3.83
TMEM54-201ENST00000329151 ATP10BO94823 1461 aa38.94■■■■□ 3.82
TMEM54-201ENST00000329151 ABCA9Q8IUA7 1624 aa38.79■■■■□ 3.8
TMEM54-201ENST00000329151 FHOD3Q2V2M9 1422 aa38.79■■■■□ 3.8
TMEM54-201ENST00000329151 KIF21BO75037 1637 aa38.77■■■■□ 3.8
TMEM54-201ENST00000329151 PHLDB1Q86UU1 1377 aa38.72■■■■□ 3.79
TMEM54-201ENST00000329151 ARAP3Q8WWN8 1544 aa38.72■■■■□ 3.79
TMEM54-201ENST00000329151 EFCAB5A4FU69 1503 aa38.71■■■■□ 3.79
TMEM54-201ENST00000329151 NUP153P49790 1475 aaKnown RBP38.7■■■■□ 3.79
TMEM54-201ENST00000329151 PLEKHD1A6NEE1 506 aa38.65■■■■□ 3.78
TMEM54-201ENST00000329151 NEO1Q92859 1461 aa38.62■■■■□ 3.77
TMEM54-201ENST00000329151 UBTFP17480 764 aaKnown RBP38.61■■■■□ 3.77
TMEM54-201ENST00000329151 EHMT2Q96KQ7 1210 aa38.6■■■■□ 3.77
TMEM54-201ENST00000329151 RAPGEF3O95398 923 aa38.52■■■■□ 3.76
TMEM54-201ENST00000329151 CFAP74Q9C0B2 1584 aa38.47■■■■□ 3.75
TMEM54-201ENST00000329151 HECW2Q9P2P5 1572 aa38.47■■■■□ 3.75
TMEM54-201ENST00000329151 ATP1B4Q9UN42 357 aaPredicted RBP38.46■■■■□ 3.75
TMEM54-201ENST00000329151 CHIC1Q5VXU3 224 aa38.44■■■■□ 3.74
TMEM54-201ENST00000329151 ARID4BQ4LE39 1312 aaPredicted RBP38.4■■■■□ 3.74
TMEM54-201ENST00000329151 FMN1Q68DA7 1419 aa38.39■■■■□ 3.74
TMEM54-201ENST00000329151 FANCAO15360 1455 aa38.38■■■■□ 3.73
TMEM54-201ENST00000329151 CDK13Q14004 1512 aaKnown RBP38.38■■■■□ 3.73
TMEM54-201ENST00000329151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.38■■■■□ 3.73
TMEM54-201ENST00000329151 DENND4BO75064 1496 aaPredicted RBP38.37■■■■□ 3.73
TMEM54-201ENST00000329151 HECW1Q76N89 1606 aa38.36■■■■□ 3.73
TMEM54-201ENST00000329151 AKNAQ7Z591 1439 aa38.36■■■■□ 3.73
TMEM54-201ENST00000329151 FRMPD1Q5SYB0 1578 aa38.36■■■■□ 3.73
TMEM54-201ENST00000329151 TTC37Q6PGP7 1564 aa38.34■■■■□ 3.73
TMEM54-201ENST00000329151 CDK11AQ9UQ88 783 aaPredicted RBP38.3■■■■□ 3.72
TMEM54-201ENST00000329151 RICTORQ6R327 1708 aa38.29■■■■□ 3.72
TMEM54-201ENST00000329151 ARHGAP35Q9NRY4 1499 aa38.27■■■■□ 3.72
TMEM54-201ENST00000329151 ADAMTSL3P82987 1691 aa38.27■■■■□ 3.72
TMEM54-201ENST00000329151 ARHGEF40Q8TER5 1519 aa38.26■■■■□ 3.72
TMEM54-201ENST00000329151 BCORL1Q5H9F3 1711 aa38.24■■■■□ 3.71
TMEM54-201ENST00000329151 PTPRMP28827 1452 aa38.21■■■■□ 3.71
TMEM54-201ENST00000329151 MYO5CQ9NQX4 1742 aa38.18■■■■□ 3.7
TMEM54-201ENST00000329151 PLCH2O75038 1416 aa38.15■■■■□ 3.7
TMEM54-201ENST00000329151 MADDQ8WXG6 1647 aa38.15■■■■□ 3.7
TMEM54-201ENST00000329151 POGZQ7Z3K3 1410 aa38.13■■■■□ 3.7
TMEM54-201ENST00000329151 ZMYM4Q5VZL5 1548 aa38.13■■■■□ 3.69
TMEM54-201ENST00000329151 ZFYVE16Q7Z3T8 1539 aa38.13■■■■□ 3.69
TMEM54-201ENST00000329151 CLIP1P30622 1438 aa38.12■■■■□ 3.69
TMEM54-201ENST00000329151 KIF14Q15058 1648 aa38.12■■■■□ 3.69
TMEM54-201ENST00000329151 EFCAB2Q5VUJ9 269 aa38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms