RNA–Protein interactions for RNA: ENST00000328735.10

BACE2-201, Transcript of beta-secretase 2, humanhuman

TSL 1 (best) BASIC

Gene BACE2, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE2-201ENST00000328735 IGF1RP08069 1367 aa28.07■■■□□ 2.08
BACE2-201ENST00000328735 CFTRP13569 1480 aa28.06■■■□□ 2.08
BACE2-201ENST00000328735 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
BACE2-201ENST00000328735 FKBP8Q14318 412 aa28.06■■■□□ 2.08
BACE2-201ENST00000328735 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
BACE2-201ENST00000328735 P3H3Q8IVL6 736 aa28.02■■■□□ 2.08
BACE2-201ENST00000328735 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
BACE2-201ENST00000328735 ATP1B4Q9UN42 357 aaPredicted RBP28■■■□□ 2.07
BACE2-201ENST00000328735 PPP1R15AO75807 674 aaPredicted RBP27.98■■■□□ 2.07
BACE2-201ENST00000328735 ANP32EQ9BTT0 268 aa27.96■■■□□ 2.07
BACE2-201ENST00000328735 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
BACE2-201ENST00000328735 TRIM52Q96A61 297 aa27.94■■■□□ 2.06
BACE2-201ENST00000328735 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
BACE2-201ENST00000328735 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
BACE2-201ENST00000328735 FGD5Q6ZNL6 1462 aa27.8■■■□□ 2.04
BACE2-201ENST00000328735 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
BACE2-201ENST00000328735 ANP32CO43423 234 aa27.79■■■□□ 2.04
BACE2-201ENST00000328735 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
BACE2-201ENST00000328735 TIMELESSQ9UNS1 1208 aa27.77■■■□□ 2.04
BACE2-201ENST00000328735 NEFLP07196 543 aa27.77■■■□□ 2.04
BACE2-201ENST00000328735 FHOD3Q2V2M9 1422 aa27.76■■■□□ 2.03
BACE2-201ENST00000328735 CCER2I3L3R5 266 aa27.74■■■□□ 2.03
BACE2-201ENST00000328735 RBM19Q9Y4C8 960 aaKnown RBP27.73■■■□□ 2.03
BACE2-201ENST00000328735 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
BACE2-201ENST00000328735 BCL11AQ9H165 835 aa27.73■■■□□ 2.03
BACE2-201ENST00000328735 CFAP43Q8NDM7 1665 aa27.71■■■□□ 2.03
BACE2-201ENST00000328735 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
BACE2-201ENST00000328735 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
BACE2-201ENST00000328735 PRDM2Q13029 1718 aa27.64■■■□□ 2.02
BACE2-201ENST00000328735 PTPRKQ15262 1439 aa27.57■■■□□ 2
BACE2-201ENST00000328735 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
BACE2-201ENST00000328735 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
BACE2-201ENST00000328735 FGD6Q6ZV73 1430 aa27.56■■■□□ 2
BACE2-201ENST00000328735 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
BACE2-201ENST00000328735 CCDC18Q5T9S5 1454 aa27.55■■■□□ 2
BACE2-201ENST00000328735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.55■■■□□ 2
BACE2-201ENST00000328735 IRX6P78412 446 aaPredicted RBP27.52■■■□□ 2
BACE2-201ENST00000328735 NESP48681 1621 aa27.51■■□□□ 1.99
BACE2-201ENST00000328735 HNRNPUQ00839 825 aaKnown RBP eCLIP27.5■■□□□ 1.99
BACE2-201ENST00000328735 UACAQ9BZF9 1416 aa27.48■■□□□ 1.99
BACE2-201ENST00000328735 MTUS2Q5JR59 1369 aa27.47■■□□□ 1.99
BACE2-201ENST00000328735 HFM1A2PYH4 1435 aa27.46■■□□□ 1.99
BACE2-201ENST00000328735 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.98
BACE2-201ENST00000328735 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
BACE2-201ENST00000328735 MSH5O43196 834 aa27.44■■□□□ 1.98
BACE2-201ENST00000328735 EFCAB5A4FU69 1503 aa27.43■■□□□ 1.98
BACE2-201ENST00000328735 NAIPQ13075 1403 aa27.41■■□□□ 1.98
BACE2-201ENST00000328735 PTPN23Q9H3S7 1636 aa27.41■■□□□ 1.98
BACE2-201ENST00000328735 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.97
BACE2-201ENST00000328735 FMN1Q68DA7 1419 aa27.39■■□□□ 1.97
BACE2-201ENST00000328735 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
BACE2-201ENST00000328735 WASHC2AQ641Q2 1341 aa27.37■■□□□ 1.97
BACE2-201ENST00000328735 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
BACE2-201ENST00000328735 KDM5BQ9UGL1 1544 aa27.37■■□□□ 1.97
BACE2-201ENST00000328735 RRP7BPQ9NSQ0 103 aa27.35■■□□□ 1.97
BACE2-201ENST00000328735 HSPA5P11021 654 aaKnown RBP27.35■■□□□ 1.97
BACE2-201ENST00000328735 CHIC2Q9UKJ5 165 aa27.34■■□□□ 1.97
BACE2-201ENST00000328735 CCDC184Q52MB2 194 aa27.33■■□□□ 1.97
BACE2-201ENST00000328735 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
BACE2-201ENST00000328735 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
BACE2-201ENST00000328735 CTTNBP2Q8WZ74 1663 aa27.3■■□□□ 1.96
BACE2-201ENST00000328735 MYOM3Q5VTT5 1437 aa27.3■■□□□ 1.96
BACE2-201ENST00000328735 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
BACE2-201ENST00000328735 LRRIQ1Q96JM4 1722 aa27.27■■□□□ 1.96
BACE2-201ENST00000328735 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
BACE2-201ENST00000328735 CUL7Q14999 1698 aa27.23■■□□□ 1.95
BACE2-201ENST00000328735 C11orf95C9JLR9 678 aaPredicted RBP27.21■■□□□ 1.95
BACE2-201ENST00000328735 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
BACE2-201ENST00000328735 TDRD9Q8NDG6 1382 aaKnown RBP27.21■■□□□ 1.95
BACE2-201ENST00000328735 EIF4G2P78344 907 aaKnown RBP eCLIP27.2■■□□□ 1.94
BACE2-201ENST00000328735 FOXD1Q16676 465 aa27.2■■□□□ 1.94
BACE2-201ENST00000328735 GRIN2BQ13224 1484 aa27.18■■□□□ 1.94
BACE2-201ENST00000328735 FAM9BQ8IZU0 186 aa27.17■■□□□ 1.94
BACE2-201ENST00000328735 FANCIQ9NVI1 1328 aa27.17■■□□□ 1.94
BACE2-201ENST00000328735 L3MBTL2Q969R5 705 aa27.15■■□□□ 1.94
BACE2-201ENST00000328735 SUPT6HQ7KZ85 1726 aaKnown RBP27.14■■□□□ 1.94
BACE2-201ENST00000328735 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
BACE2-201ENST00000328735 SAMD9Q5K651 1589 aa27.13■■□□□ 1.93
BACE2-201ENST00000328735 KDM6BO15054 1643 aa27.11■■□□□ 1.93
BACE2-201ENST00000328735 CNTLNQ9NXG0 1405 aa27.11■■□□□ 1.93
BACE2-201ENST00000328735 MPHOSPH9Q99550 1183 aa27.11■■□□□ 1.93
BACE2-201ENST00000328735 PRKRIP1Q9H875 184 aaPredicted RBP27.11■■□□□ 1.93
BACE2-201ENST00000328735 PPP4R2Q9NY27 417 aa27.1■■□□□ 1.93
BACE2-201ENST00000328735 UGGT2Q9NYU1 1516 aa27.1■■□□□ 1.93
BACE2-201ENST00000328735 B4GALNT3Q6L9W6 998 aa27.09■■□□□ 1.93
BACE2-201ENST00000328735 EHBP1L1Q8N3D4 1523 aa27.09■■□□□ 1.93
BACE2-201ENST00000328735 ARID3CA6NKF2 412 aa27.09■■□□□ 1.93
BACE2-201ENST00000328735 MRS2Q9HD23 443 aa27.08■■□□□ 1.93
BACE2-201ENST00000328735 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
BACE2-201ENST00000328735 ERICH6Q7L0X2 663 aa27.05■■□□□ 1.92
BACE2-201ENST00000328735 CCDC7Q96M83 1385 aa27.04■■□□□ 1.92
BACE2-201ENST00000328735 NBPF8Q3BBV2 869 aa27.03■■□□□ 1.92
BACE2-201ENST00000328735 ARHGEF11O15085 1522 aa27.03■■□□□ 1.92
BACE2-201ENST00000328735 GAPVD1Q14C86 1478 aa27.01■■□□□ 1.91
BACE2-201ENST00000328735 ERICH6BQ5W0A0 696 aa27.01■■□□□ 1.91
BACE2-201ENST00000328735 NCOA1Q15788 1441 aa27.01■■□□□ 1.91
BACE2-201ENST00000328735 HECW1Q76N89 1606 aa27.01■■□□□ 1.91
BACE2-201ENST00000328735 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
BACE2-201ENST00000328735 CNGB1Q14028 1251 aaPredicted RBP26.98■■□□□ 1.91
BACE2-201ENST00000328735 TCOF1Q13428 1488 aaKnown RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms