RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
PPP3CA-201ENST00000323055 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
PPP3CA-201ENST00000323055 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
PPP3CA-201ENST00000323055 KDM2AQ9Y2K7 1162 aa23.59■■□□□ 1.37
PPP3CA-201ENST00000323055 CFDP1Q9UEE9 299 aaPredicted RBP23.56■■□□□ 1.36
PPP3CA-201ENST00000323055 CHGAP10645 457 aaKnown RBP23.56■■□□□ 1.36
PPP3CA-201ENST00000323055 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
PPP3CA-201ENST00000323055 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
PPP3CA-201ENST00000323055 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
PPP3CA-201ENST00000323055 HNRNPUQ00839 825 aaKnown RBP eCLIP23.47■■□□□ 1.35
PPP3CA-201ENST00000323055 FAM9BQ8IZU0 186 aa23.47■■□□□ 1.35
PPP3CA-201ENST00000323055 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.34
PPP3CA-201ENST00000323055 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
PPP3CA-201ENST00000323055 RGL3Q3MIN7 710 aa23.37■■□□□ 1.33
PPP3CA-201ENST00000323055 FKBP8Q14318 412 aa23.36■■□□□ 1.33
PPP3CA-201ENST00000323055 DAXXQ9UER7 740 aaPredicted RBP23.36■■□□□ 1.33
PPP3CA-201ENST00000323055 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
PPP3CA-201ENST00000323055 SALL2Q9Y467 1007 aaPredicted RBP23.34■■□□□ 1.33
PPP3CA-201ENST00000323055 FHOD3Q2V2M9 1422 aa23.34■■□□□ 1.33
PPP3CA-201ENST00000323055 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
PPP3CA-201ENST00000323055 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
PPP3CA-201ENST00000323055 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
PPP3CA-201ENST00000323055 PLPPR3Q6T4P5 718 aa23.28■■□□□ 1.32
PPP3CA-201ENST00000323055 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
PPP3CA-201ENST00000323055 STAG3Q9UJ98 1225 aa23.27■■□□□ 1.32
PPP3CA-201ENST00000323055 ESF1Q9H501 851 aaKnown RBP23.25■■□□□ 1.31
PPP3CA-201ENST00000323055 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
PPP3CA-201ENST00000323055 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
PPP3CA-201ENST00000323055 SETD5Q9C0A6 1442 aa23.24■■□□□ 1.31
PPP3CA-201ENST00000323055 IGF1RP08069 1367 aa23.23■■□□□ 1.31
PPP3CA-201ENST00000323055 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
PPP3CA-201ENST00000323055 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
PPP3CA-201ENST00000323055 FOXD1Q16676 465 aa23.2■■□□□ 1.3
PPP3CA-201ENST00000323055 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
PPP3CA-201ENST00000323055 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
PPP3CA-201ENST00000323055 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
PPP3CA-201ENST00000323055 IRX6P78412 446 aaPredicted RBP23.11■■□□□ 1.29
PPP3CA-201ENST00000323055 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
PPP3CA-201ENST00000323055 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
PPP3CA-201ENST00000323055 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
PPP3CA-201ENST00000323055 CARMIL2Q6F5E8 1435 aa23.06■■□□□ 1.28
PPP3CA-201ENST00000323055 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
PPP3CA-201ENST00000323055 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
PPP3CA-201ENST00000323055 CFTRP13569 1480 aa23.03■■□□□ 1.28
PPP3CA-201ENST00000323055 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
PPP3CA-201ENST00000323055 NEFMP07197 916 aa23.02■■□□□ 1.28
PPP3CA-201ENST00000323055 MYT1Q01538 1121 aa23.01■■□□□ 1.27
PPP3CA-201ENST00000323055 TIMELESSQ9UNS1 1208 aa23.01■■□□□ 1.27
PPP3CA-201ENST00000323055 PKD2Q13563 968 aa23■■□□□ 1.27
PPP3CA-201ENST00000323055 DCAF11Q8TEB1 546 aa23■■□□□ 1.27
PPP3CA-201ENST00000323055 SLC24A1O60721 1099 aa23■■□□□ 1.27
PPP3CA-201ENST00000323055 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
PPP3CA-201ENST00000323055 NESP48681 1621 aa22.99■■□□□ 1.27
PPP3CA-201ENST00000323055 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
PPP3CA-201ENST00000323055 DHX57Q6P158 1386 aaKnown RBP22.96■■□□□ 1.27
PPP3CA-201ENST00000323055 KIF21BO75037 1637 aa22.95■■□□□ 1.26
PPP3CA-201ENST00000323055 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
PPP3CA-201ENST00000323055 PPP1R15AO75807 674 aaPredicted RBP22.92■■□□□ 1.26
PPP3CA-201ENST00000323055 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
PPP3CA-201ENST00000323055 HNRNPMP52272 730 aaKnown RBP eCLIP22.91■■□□□ 1.26
PPP3CA-201ENST00000323055 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.26
PPP3CA-201ENST00000323055 RTL5Q5HYW3 569 aaPredicted RBP22.89■■□□□ 1.26
PPP3CA-201ENST00000323055 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.26
PPP3CA-201ENST00000323055 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
PPP3CA-201ENST00000323055 CCDC136Q96JN2 1154 aa22.87■■□□□ 1.25
PPP3CA-201ENST00000323055 NUP155O75694 1391 aa22.86■■□□□ 1.25
PPP3CA-201ENST00000323055 CUX1P39880 1505 aa22.85■■□□□ 1.25
PPP3CA-201ENST00000323055 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
PPP3CA-201ENST00000323055 NPM2Q86SE8 214 aaKnown RBP22.85■■□□□ 1.25
PPP3CA-201ENST00000323055 SUPT16HQ9Y5B9 1047 aaKnown RBP22.84■■□□□ 1.25
PPP3CA-201ENST00000323055 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
PPP3CA-201ENST00000323055 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
PPP3CA-201ENST00000323055 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
PPP3CA-201ENST00000323055 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
PPP3CA-201ENST00000323055 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
PPP3CA-201ENST00000323055 EFCAB2Q5VUJ9 269 aa22.8■■□□□ 1.24
PPP3CA-201ENST00000323055 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
PPP3CA-201ENST00000323055 ANKRD30AQ9BXX3 1397 aa22.79■■□□□ 1.24
PPP3CA-201ENST00000323055 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
PPP3CA-201ENST00000323055 TOP2BQ02880 1626 aa22.78■■□□□ 1.24
PPP3CA-201ENST00000323055 GGT6Q6P531 493 aa22.78■■□□□ 1.24
PPP3CA-201ENST00000323055 ARID4BQ4LE39 1312 aaPredicted RBP22.76■■□□□ 1.23
PPP3CA-201ENST00000323055 CC2D1BQ5T0F9 858 aaKnown RBP22.76■■□□□ 1.23
PPP3CA-201ENST00000323055 ZNF644Q9H582 1327 aaPredicted RBP22.74■■□□□ 1.23
PPP3CA-201ENST00000323055 ANP32AP39687 249 aaKnown RBP22.72■■□□□ 1.23
PPP3CA-201ENST00000323055 CDCA8Q53HL2 280 aa22.72■■□□□ 1.23
PPP3CA-201ENST00000323055 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
PPP3CA-201ENST00000323055 PTPRGP23470 1445 aa22.7■■□□□ 1.23
PPP3CA-201ENST00000323055 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
PPP3CA-201ENST00000323055 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
PPP3CA-201ENST00000323055 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
PPP3CA-201ENST00000323055 MLECQ14165 292 aa22.69■■□□□ 1.22
PPP3CA-201ENST00000323055 TNNT2P45379 298 aaPredicted RBP22.68■■□□□ 1.22
PPP3CA-201ENST00000323055 KIF3BO15066 747 aa22.65■■□□□ 1.22
PPP3CA-201ENST00000323055 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
PPP3CA-201ENST00000323055 KANK1Q14678 1352 aa22.65■■□□□ 1.22
PPP3CA-201ENST00000323055 CCER2I3L3R5 266 aa22.65■■□□□ 1.22
PPP3CA-201ENST00000323055 TMF1P82094 1093 aa22.65■■□□□ 1.22
PPP3CA-201ENST00000323055 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
PPP3CA-201ENST00000323055 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms