RNA–Protein interactions for RNA: ENST00000322914.7

TMC6-202, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,786 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-202ENST00000322914 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
TMC6-202ENST00000322914 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
TMC6-202ENST00000322914 CUL7Q14999 1698 aa26.58■■□□□ 1.85
TMC6-202ENST00000322914 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
TMC6-202ENST00000322914 ARHGAP35Q9NRY4 1499 aa26.51■■□□□ 1.83
TMC6-202ENST00000322914 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
TMC6-202ENST00000322914 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
TMC6-202ENST00000322914 WDR62O43379 1518 aa26.45■■□□□ 1.82
TMC6-202ENST00000322914 CTTNBP2Q8WZ74 1663 aa26.38■■□□□ 1.81
TMC6-202ENST00000322914 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
TMC6-202ENST00000322914 APLP2Q06481 763 aa26.34■■□□□ 1.81
TMC6-202ENST00000322914 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
TMC6-202ENST00000322914 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
TMC6-202ENST00000322914 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
TMC6-202ENST00000322914 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.81e-9■■■■■ 34.8
TMC6-202ENST00000322914 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
TMC6-202ENST00000322914 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
TMC6-202ENST00000322914 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
TMC6-202ENST00000322914 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
TMC6-202ENST00000322914 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
TMC6-202ENST00000322914 KANK4Q5T7N3 995 aaPredicted RBP26.17■■□□□ 1.78
TMC6-202ENST00000322914 FHOD3Q2V2M9 1422 aa26.15■■□□□ 1.78
TMC6-202ENST00000322914 EIF4G3O43432 1585 aaKnown RBP26.14■■□□□ 1.78
TMC6-202ENST00000322914 PCF11O94913 1555 aaKnown RBP26.13■■□□□ 1.77
TMC6-202ENST00000322914 SAMD9Q5K651 1589 aa26.13■■□□□ 1.77
TMC6-202ENST00000322914 P3H3Q8IVL6 736 aa26.12■■□□□ 1.77
TMC6-202ENST00000322914 TIAM1Q13009 1591 aa26.11■■□□□ 1.77
TMC6-202ENST00000322914 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
TMC6-202ENST00000322914 CFAP43Q8NDM7 1665 aa26.05■■□□□ 1.76
TMC6-202ENST00000322914 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
TMC6-202ENST00000322914 FYCO1Q9BQS8 1478 aa26.03■■□□□ 1.76
TMC6-202ENST00000322914 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
TMC6-202ENST00000322914 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
TMC6-202ENST00000322914 IQGAP2Q13576 1575 aa26■■□□□ 1.75
TMC6-202ENST00000322914 FMN1Q68DA7 1419 aa25.98■■□□□ 1.75
TMC6-202ENST00000322914 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
TMC6-202ENST00000322914 RRBP1Q9P2E9 1410 aaKnown RBP25.95■■□□□ 1.75
TMC6-202ENST00000322914 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
TMC6-202ENST00000322914 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
TMC6-202ENST00000322914 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
TMC6-202ENST00000322914 UGGT2Q9NYU1 1516 aa25.86■■□□□ 1.73
TMC6-202ENST00000322914 ATP1B4Q9UN42 357 aaPredicted RBP25.86■■□□□ 1.73
TMC6-202ENST00000322914 DHX57Q6P158 1386 aaKnown RBP25.86■■□□□ 1.73
TMC6-202ENST00000322914 KIAA0586Q9BVV6 1533 aa25.84■■□□□ 1.73
TMC6-202ENST00000322914 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
TMC6-202ENST00000322914 CCNB3Q8WWL7 1395 aa25.83■■□□□ 1.72
TMC6-202ENST00000322914 CEP170Q5SW79 1584 aa25.79■■□□□ 1.72
TMC6-202ENST00000322914 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
TMC6-202ENST00000322914 TSHZ2Q9NRE2 1034 aa25.78■■□□□ 1.72
TMC6-202ENST00000322914 CLSPNQ9HAW4 1339 aa25.76■■□□□ 1.71
TMC6-202ENST00000322914 ITGAEP38570 1179 aa25.76■■□□□ 1.71
TMC6-202ENST00000322914 KIAA0556O60303 1618 aa25.75■■□□□ 1.71
TMC6-202ENST00000322914 KCNH8Q96L42 1107 aa25.74■■□□□ 1.71
TMC6-202ENST00000322914 DISP1Q96F81 1524 aa25.74■■□□□ 1.71
TMC6-202ENST00000322914 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
TMC6-202ENST00000322914 BCANQ96GW7 911 aa25.72■■□□□ 1.71
TMC6-202ENST00000322914 HECW1Q76N89 1606 aa25.71■■□□□ 1.71
TMC6-202ENST00000322914 NUP160Q12769 1436 aa25.69■■□□□ 1.7
TMC6-202ENST00000322914 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
TMC6-202ENST00000322914 FBLN2P98095 1184 aa25.66■■□□□ 1.7
TMC6-202ENST00000322914 MTUS2Q5JR59 1369 aa25.64■■□□□ 1.7
TMC6-202ENST00000322914 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
TMC6-202ENST00000322914 MAGI3Q5TCQ9 1506 aa25.62■■□□□ 1.69
TMC6-202ENST00000322914 EPRSP07814 1512 aaKnown RBP25.61■■□□□ 1.69
TMC6-202ENST00000322914 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
TMC6-202ENST00000322914 ANP32EQ9BTT0 268 aa25.59■■□□□ 1.69
TMC6-202ENST00000322914 NCOA2Q15596 1464 aa25.57■■□□□ 1.68
TMC6-202ENST00000322914 CDK13Q14004 1512 aaKnown RBP25.56■■□□□ 1.68
TMC6-202ENST00000322914 FGD6Q6ZV73 1430 aa25.55■■□□□ 1.68
TMC6-202ENST00000322914 RAPGEF6Q8TEU7 1601 aa25.54■■□□□ 1.68
TMC6-202ENST00000322914 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
TMC6-202ENST00000322914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.53■■□□□ 1.682e-7■■■■□ 20.4
TMC6-202ENST00000322914 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
TMC6-202ENST00000322914 CHD1O14646 1710 aa25.52■■□□□ 1.68
TMC6-202ENST00000322914 FKBP8Q14318 412 aa25.51■■□□□ 1.67
TMC6-202ENST00000322914 NUP153P49790 1475 aaKnown RBP25.5■■□□□ 1.67
TMC6-202ENST00000322914 JPH4Q96JJ6 628 aa25.5■■□□□ 1.67
TMC6-202ENST00000322914 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
TMC6-202ENST00000322914 DDX10Q13206 875 aaKnown RBP25.47■■□□□ 1.67
TMC6-202ENST00000322914 CARMIL2Q6F5E8 1435 aa25.47■■□□□ 1.67
TMC6-202ENST00000322914 ARID3CA6NKF2 412 aa25.43■■□□□ 1.66
TMC6-202ENST00000322914 RAB3GAP2Q9H2M9 1393 aa25.43■■□□□ 1.66
TMC6-202ENST00000322914 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
TMC6-202ENST00000322914 SETD5Q9C0A6 1442 aa25.4■■□□□ 1.66
TMC6-202ENST00000322914 PTPN23Q9H3S7 1636 aa25.39■■□□□ 1.66
TMC6-202ENST00000322914 HIRIP3Q9BW71 556 aaPredicted RBP25.39■■□□□ 1.65
TMC6-202ENST00000322914 SIN3AQ96ST3 1273 aa25.36■■□□□ 1.65
TMC6-202ENST00000322914 ABCA8O94911 1581 aa25.34■■□□□ 1.65
TMC6-202ENST00000322914 TRIM52Q96A61 297 aa25.33■■□□□ 1.65
TMC6-202ENST00000322914 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.65
TMC6-202ENST00000322914 PTPRKQ15262 1439 aa25.32■■□□□ 1.64
TMC6-202ENST00000322914 PRG4Q92954 1404 aaPredicted RBP25.32■■□□□ 1.64
TMC6-202ENST00000322914 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
TMC6-202ENST00000322914 NEFLP07196 543 aa25.29■■□□□ 1.64
TMC6-202ENST00000322914 MIA2Q96PC5 1412 aa25.27■■□□□ 1.64
TMC6-202ENST00000322914 BCL11AQ9H165 835 aa25.26■■□□□ 1.63
TMC6-202ENST00000322914 MAPKBP1O60336 1514 aa25.25■■□□□ 1.63
TMC6-202ENST00000322914 CDK11AQ9UQ88 783 aaPredicted RBP25.25■■□□□ 1.63
TMC6-202ENST00000322914 TROQ12816 1431 aaPredicted RBP25.25■■□□□ 1.63
TMC6-202ENST00000322914 RBM19Q9Y4C8 960 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms