RNA–Protein interactions for RNA: ENST00000322914.7

TMC6-202, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,786 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-202ENST00000322914 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
TMC6-202ENST00000322914 CCDC180Q9P1Z9 1646 aa32.89■■■□□ 2.86
TMC6-202ENST00000322914 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
TMC6-202ENST00000322914 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
TMC6-202ENST00000322914 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
TMC6-202ENST00000322914 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
TMC6-202ENST00000322914 ABCC9O60706 1549 aa30.82■■■□□ 2.52
TMC6-202ENST00000322914 MYO15BQ96JP2 1530 aa30.79■■■□□ 2.52
TMC6-202ENST00000322914 NACADO15069 1562 aa30.52■■■□□ 2.48
TMC6-202ENST00000322914 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
TMC6-202ENST00000322914 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
TMC6-202ENST00000322914 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
TMC6-202ENST00000322914 HRCP23327 699 aa29.82■■■□□ 2.36
TMC6-202ENST00000322914 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
TMC6-202ENST00000322914 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
TMC6-202ENST00000322914 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
TMC6-202ENST00000322914 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
TMC6-202ENST00000322914 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
TMC6-202ENST00000322914 PPARGC1BQ86YN6 1023 aaKnown RBP29.42■■■□□ 2.3
TMC6-202ENST00000322914 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.3
TMC6-202ENST00000322914 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
TMC6-202ENST00000322914 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
TMC6-202ENST00000322914 WIZO95785 1651 aa29.2■■■□□ 2.26
TMC6-202ENST00000322914 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.264e-7■□□□□ 10.3
TMC6-202ENST00000322914 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
TMC6-202ENST00000322914 LOC105371045A0A1W2PR82 267 aa28.99■■■□□ 2.23
TMC6-202ENST00000322914 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
TMC6-202ENST00000322914 PEG3Q9GZU2 1588 aa28.72■■■□□ 2.19
TMC6-202ENST00000322914 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
TMC6-202ENST00000322914 TRIM26Q12899 539 aaPredicted RBP28.61■■■□□ 2.17
TMC6-202ENST00000322914 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
TMC6-202ENST00000322914 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
TMC6-202ENST00000322914 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
TMC6-202ENST00000322914 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
TMC6-202ENST00000322914 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
TMC6-202ENST00000322914 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
TMC6-202ENST00000322914 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
TMC6-202ENST00000322914 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
TMC6-202ENST00000322914 EHMT2Q96KQ7 1210 aa28.16■■■□□ 2.1
TMC6-202ENST00000322914 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
TMC6-202ENST00000322914 ZEB1P37275 1124 aaPredicted RBP28.15■■■□□ 2.1
TMC6-202ENST00000322914 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
TMC6-202ENST00000322914 PELP1Q8IZL8 1130 aaKnown RBP27.97■■■□□ 2.07
TMC6-202ENST00000322914 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
TMC6-202ENST00000322914 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
TMC6-202ENST00000322914 SYNJ1O43426 1573 aa27.78■■■□□ 2.04
TMC6-202ENST00000322914 CFTRP13569 1480 aa27.69■■■□□ 2.02
TMC6-202ENST00000322914 SOGA1O94964 1423 aa27.68■■■□□ 2.02
TMC6-202ENST00000322914 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
TMC6-202ENST00000322914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.6■■■□□ 2.01
TMC6-202ENST00000322914 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
TMC6-202ENST00000322914 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
TMC6-202ENST00000322914 EEA1Q15075 1411 aa27.58■■■□□ 2.01
TMC6-202ENST00000322914 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
TMC6-202ENST00000322914 CCER1Q8TC90 406 aaPredicted RBP27.51■■□□□ 1.99
TMC6-202ENST00000322914 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
TMC6-202ENST00000322914 NEUROD1Q13562 356 aa27.46■■□□□ 1.99
TMC6-202ENST00000322914 CUX1P39880 1505 aa27.45■■□□□ 1.98
TMC6-202ENST00000322914 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
TMC6-202ENST00000322914 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
TMC6-202ENST00000322914 TTBK1Q5TCY1 1321 aaPredicted RBP27.38■■□□□ 1.97
TMC6-202ENST00000322914 GTF3C3Q9Y5Q9 886 aa27.29■■□□□ 1.96
TMC6-202ENST00000322914 KIF21BO75037 1637 aa27.28■■□□□ 1.96
TMC6-202ENST00000322914 DIEXFQ68CQ4 756 aaKnown RBP27.28■■□□□ 1.96
TMC6-202ENST00000322914 GOLGA3Q08378 1498 aa27.27■■□□□ 1.96
TMC6-202ENST00000322914 TNIKQ9UKE5 1360 aa27.25■■□□□ 1.95
TMC6-202ENST00000322914 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
TMC6-202ENST00000322914 NESP48681 1621 aa27.22■■□□□ 1.95
TMC6-202ENST00000322914 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
TMC6-202ENST00000322914 CEP162Q5TB80 1403 aa27.19■■□□□ 1.94
TMC6-202ENST00000322914 CENPBP07199 599 aaPredicted RBP27.17■■□□□ 1.94
TMC6-202ENST00000322914 DNAJC5BQ9UF47 199 aa27.17■■□□□ 1.94
TMC6-202ENST00000322914 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
TMC6-202ENST00000322914 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
TMC6-202ENST00000322914 RAPGEF2Q9Y4G8 1499 aa27.09■■□□□ 1.93
TMC6-202ENST00000322914 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
TMC6-202ENST00000322914 FGD5Q6ZNL6 1462 aa27.07■■□□□ 1.92
TMC6-202ENST00000322914 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
TMC6-202ENST00000322914 PRXQ9BXM0 1461 aa27.03■■□□□ 1.92
TMC6-202ENST00000322914 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
TMC6-202ENST00000322914 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
TMC6-202ENST00000322914 YTHDC1Q96MU7 727 aaKnown RBP26.96■■□□□ 1.91
TMC6-202ENST00000322914 CUX2O14529 1486 aa26.96■■□□□ 1.91
TMC6-202ENST00000322914 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
TMC6-202ENST00000322914 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
TMC6-202ENST00000322914 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.9
TMC6-202ENST00000322914 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.89
TMC6-202ENST00000322914 CLIP1P30622 1438 aa26.86■■□□□ 1.89
TMC6-202ENST00000322914 RAD54L2Q9Y4B4 1467 aa26.83■■□□□ 1.89
TMC6-202ENST00000322914 IGF1RP08069 1367 aa26.83■■□□□ 1.89
TMC6-202ENST00000322914 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
TMC6-202ENST00000322914 ZNF316A6NFI3 1004 aaPredicted RBP26.8■■□□□ 1.88
TMC6-202ENST00000322914 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
TMC6-202ENST00000322914 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
TMC6-202ENST00000322914 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
TMC6-202ENST00000322914 MYT1Q01538 1121 aa26.68■■□□□ 1.86
TMC6-202ENST00000322914 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
TMC6-202ENST00000322914 MIER1Q8N108 512 aa26.64■■□□□ 1.86
TMC6-202ENST00000322914 HNRNPUL2Q1KMD3 747 aaKnown RBP26.62■■□□□ 1.85
TMC6-202ENST00000322914 ABCA5Q8WWZ7 1642 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms