RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 RUSC2Q8N2Y8 1516 aa35.16■■■■□ 3.22
SSNA1-201ENST00000322310 FAM69CQ0P6D2 419 aa35.12■■■■□ 3.21
SSNA1-201ENST00000322310 ABCC10Q5T3U5 1492 aa35.1■■■■□ 3.21
SSNA1-201ENST00000322310 NPM1P06748 294 aaKnown RBP eCLIP35.05■■■■□ 3.2
SSNA1-201ENST00000322310 MAPKBP1O60336 1514 aa35.04■■■■□ 3.2
SSNA1-201ENST00000322310 ADCY10Q96PN6 1610 aa35.03■■■■□ 3.2
SSNA1-201ENST00000322310 DIP2BQ9P265 1576 aa35.02■■■■□ 3.2
SSNA1-201ENST00000322310 KIAA0586Q9BVV6 1533 aa34.9■■■■□ 3.18
SSNA1-201ENST00000322310 KDM6BO15054 1643 aa34.86■■■■□ 3.17
SSNA1-201ENST00000322310 IGF1RP08069 1367 aa34.84■■■■□ 3.17
SSNA1-201ENST00000322310 KDM4FA0A1W2PPD8 638 aa34.8■■■■□ 3.16
SSNA1-201ENST00000322310 TSPOAP1O95153 1857 aa34.79■■■■□ 3.16
SSNA1-201ENST00000322310 CUL7Q14999 1698 aa34.76■■■■□ 3.16
SSNA1-201ENST00000322310 KIF27Q86VH2 1401 aa34.75■■■■□ 3.15
SSNA1-201ENST00000322310 TTBK1Q5TCY1 1321 aaPredicted RBP34.71■■■■□ 3.15
SSNA1-201ENST00000322310 PTPRGP23470 1445 aa34.7■■■■□ 3.15
SSNA1-201ENST00000322310 ABCC2Q92887 1545 aa34.6■■■■□ 3.13
SSNA1-201ENST00000322310 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
SSNA1-201ENST00000322310 TNIKQ9UKE5 1360 aa34.58■■■■□ 3.13
SSNA1-201ENST00000322310 CARMIL2Q6F5E8 1435 aa34.55■■■■□ 3.12
SSNA1-201ENST00000322310 ASXL2Q76L83 1435 aa34.55■■■■□ 3.12
SSNA1-201ENST00000322310 PPRC1Q5VV67 1664 aaKnown RBP34.5■■■■□ 3.11
SSNA1-201ENST00000322310 PLB1Q6P1J6 1458 aa34.49■■■■□ 3.11
SSNA1-201ENST00000322310 IQGAP2Q13576 1575 aa34.49■■■■□ 3.11
SSNA1-201ENST00000322310 GLI2P10070 1586 aa34.47■■■■□ 3.11
SSNA1-201ENST00000322310 UHRF1BP1LA0JNW5 1464 aa34.44■■■■□ 3.1
SSNA1-201ENST00000322310 UACAQ9BZF9 1416 aa34.41■■■■□ 3.1
SSNA1-201ENST00000322310 DISP1Q96F81 1524 aa34.4■■■■□ 3.1
SSNA1-201ENST00000322310 ADGRL1O94910 1474 aa34.38■■■■□ 3.09
SSNA1-201ENST00000322310 COL17A1Q9UMD9 1497 aaPredicted RBP34.35■■■■□ 3.09
SSNA1-201ENST00000322310 EPRSP07814 1512 aaKnown RBP34.33■■■■□ 3.09
SSNA1-201ENST00000322310 ILDR1Q86SU0 546 aaPredicted RBP34.32■■■■□ 3.08
SSNA1-201ENST00000322310 KDM5BQ9UGL1 1544 aa34.3■■■■□ 3.08
SSNA1-201ENST00000322310 MAP3K4Q9Y6R4 1608 aa34.29■■■■□ 3.08
SSNA1-201ENST00000322310 ZCCHC11Q5TAX3 1644 aaKnown RBP34.25■■■■□ 3.07
SSNA1-201ENST00000322310 UGGT2Q9NYU1 1516 aa34.25■■■■□ 3.07
SSNA1-201ENST00000322310 TEX14Q8IWB6 1497 aa34.2■■■■□ 3.07
SSNA1-201ENST00000322310 RAPGEF2Q9Y4G8 1499 aa34.2■■■■□ 3.06
SSNA1-201ENST00000322310 KIAA0556O60303 1618 aa34.19■■■■□ 3.06
SSNA1-201ENST00000322310 WDR7Q9Y4E6 1490 aa34.1■■■■□ 3.05
SSNA1-201ENST00000322310 HECW2Q9P2P5 1572 aa34.09■■■■□ 3.05
SSNA1-201ENST00000322310 CD109Q6YHK3 1445 aa33.96■■■■□ 3.03
SSNA1-201ENST00000322310 KCNH8Q96L42 1107 aa33.95■■■■□ 3.03
SSNA1-201ENST00000322310 MAGI3Q5TCQ9 1506 aa33.94■■■■□ 3.02
SSNA1-201ENST00000322310 CTTNBP2Q8WZ74 1663 aa33.93■■■■□ 3.02
SSNA1-201ENST00000322310 ABCA8O94911 1581 aa33.92■■■■□ 3.02
SSNA1-201ENST00000322310 CFAP43Q8NDM7 1665 aa33.91■■■■□ 3.02
SSNA1-201ENST00000322310 GOLGA3Q08378 1498 aa33.89■■■■□ 3.02
SSNA1-201ENST00000322310 KIF21BO75037 1637 aa33.79■■■■□ 3
SSNA1-201ENST00000322310 ARID3CA6NKF2 412 aa33.74■■■□□ 2.99
SSNA1-201ENST00000322310 PRXQ9BXM0 1461 aa33.71■■■□□ 2.99
SSNA1-201ENST00000322310 ARAP3Q8WWN8 1544 aa33.69■■■□□ 2.98
SSNA1-201ENST00000322310 P3H3Q8IVL6 736 aa33.65■■■□□ 2.98
SSNA1-201ENST00000322310 ATP10BO94823 1461 aa33.64■■■□□ 2.98
SSNA1-201ENST00000322310 ABCA9Q8IUA7 1624 aa33.57■■■□□ 2.96
SSNA1-201ENST00000322310 RAPGEF3O95398 923 aa33.54■■■□□ 2.96
SSNA1-201ENST00000322310 PTPRMP28827 1452 aa33.53■■■□□ 2.96
SSNA1-201ENST00000322310 FAM9AQ8IZU1 332 aaPredicted RBP33.53■■■□□ 2.96
SSNA1-201ENST00000322310 ADAMTSL3P82987 1691 aa33.52■■■□□ 2.96
SSNA1-201ENST00000322310 PHLDB1Q86UU1 1377 aa33.5■■■□□ 2.95
SSNA1-201ENST00000322310 FBXO41Q8TF61 875 aa33.47■■■□□ 2.95
SSNA1-201ENST00000322310 NEO1Q92859 1461 aa33.44■■■□□ 2.94
SSNA1-201ENST00000322310 SAMD9Q5K651 1589 aa33.44■■■□□ 2.94
SSNA1-201ENST00000322310 RAPGEF6Q8TEU7 1601 aa33.43■■■□□ 2.94
SSNA1-201ENST00000322310 FRMPD1Q5SYB0 1578 aa33.43■■■□□ 2.94
SSNA1-201ENST00000322310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.41■■■□□ 2.94
SSNA1-201ENST00000322310 HNRNPUL2Q1KMD3 747 aaKnown RBP33.41■■■□□ 2.94
SSNA1-201ENST00000322310 BCORL1Q5H9F3 1711 aa33.39■■■□□ 2.94
SSNA1-201ENST00000322310 ARID4BQ4LE39 1312 aaPredicted RBP33.38■■■□□ 2.93
SSNA1-201ENST00000322310 MADDQ8WXG6 1647 aa33.37■■■□□ 2.93
SSNA1-201ENST00000322310 NUP153P49790 1475 aaKnown RBP33.34■■■□□ 2.93
SSNA1-201ENST00000322310 PCF11O94913 1555 aaKnown RBP33.31■■■□□ 2.92
SSNA1-201ENST00000322310 CSRNP3Q8WYN3 585 aa33.3■■■□□ 2.92
SSNA1-201ENST00000322310 LMTK3Q96Q04 1460 aa33.29■■■□□ 2.92
SSNA1-201ENST00000322310 RANGAP1P46060 587 aaPredicted RBP33.28■■■□□ 2.92
SSNA1-201ENST00000322310 ARHGEF40Q8TER5 1519 aa33.27■■■□□ 2.92
SSNA1-201ENST00000322310 FHOD3Q2V2M9 1422 aa33.25■■■□□ 2.91
SSNA1-201ENST00000322310 DENND4BO75064 1496 aaPredicted RBP33.23■■■□□ 2.91
SSNA1-201ENST00000322310 RIMS1Q86UR5 1692 aaKnown RBP33.23■■■□□ 2.91
SSNA1-201ENST00000322310 RICTORQ6R327 1708 aa33.21■■■□□ 2.91
SSNA1-201ENST00000322310 AKNAQ7Z591 1439 aa33.19■■■□□ 2.9
SSNA1-201ENST00000322310 PLEKHD1A6NEE1 506 aa33.17■■■□□ 2.9
SSNA1-201ENST00000322310 FANCAO15360 1455 aa33.17■■■□□ 2.9
SSNA1-201ENST00000322310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.14■■■□□ 2.9
SSNA1-201ENST00000322310 PLPPR3Q6T4P5 718 aa33.14■■■□□ 2.9
SSNA1-201ENST00000322310 HSPA2P54652 639 aa33.13■■■□□ 2.89
SSNA1-201ENST00000322310 TTC37Q6PGP7 1564 aa33.11■■■□□ 2.89
SSNA1-201ENST00000322310 CFAP74Q9C0B2 1584 aa33.11■■■□□ 2.89
SSNA1-201ENST00000322310 SIGLEC1Q9BZZ2 1709 aa33.09■■■□□ 2.89
SSNA1-201ENST00000322310 YEATS2Q9ULM3 1422 aa33.09■■■□□ 2.89
SSNA1-201ENST00000322310 ZMYM4Q5VZL5 1548 aa33.08■■■□□ 2.89
SSNA1-201ENST00000322310 ZFYVE16Q7Z3T8 1539 aa33.07■■■□□ 2.88
SSNA1-201ENST00000322310 POGZQ7Z3K3 1410 aa33.06■■■□□ 2.88
SSNA1-201ENST00000322310 EFCAB5A4FU69 1503 aa33.02■■■□□ 2.88
SSNA1-201ENST00000322310 MLECQ14165 292 aa33■■■□□ 2.87
SSNA1-201ENST00000322310 EEA1Q15075 1411 aa33■■■□□ 2.87
SSNA1-201ENST00000322310 CDK13Q14004 1512 aaKnown RBP32.99■■■□□ 2.87
SSNA1-201ENST00000322310 HECW1Q76N89 1606 aa32.99■■■□□ 2.87
SSNA1-201ENST00000322310 MAGI2Q86UL8 1455 aa32.97■■■□□ 2.87
SSNA1-201ENST00000322310 SCAPERQ9BY12 1400 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms