RNA–Protein interactions for RNA: ENST00000322099.11

PCBP4-201, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 1,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-201ENST00000322099 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
PCBP4-201ENST00000322099 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
PCBP4-201ENST00000322099 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.3
PCBP4-201ENST00000322099 ARHGAP35Q9NRY4 1499 aa23.14■■□□□ 1.29
PCBP4-201ENST00000322099 MAP3K1Q13233 1512 aa23.12■■□□□ 1.29
PCBP4-201ENST00000322099 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
PCBP4-201ENST00000322099 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
PCBP4-201ENST00000322099 MYT1Q01538 1121 aa23.1■■□□□ 1.29
PCBP4-201ENST00000322099 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
PCBP4-201ENST00000322099 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
PCBP4-201ENST00000322099 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
PCBP4-201ENST00000322099 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
PCBP4-201ENST00000322099 WDR62O43379 1518 aa23.05■■□□□ 1.28
PCBP4-201ENST00000322099 ABCA5Q8WWZ7 1642 aa23.02■■□□□ 1.28
PCBP4-201ENST00000322099 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
PCBP4-201ENST00000322099 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
PCBP4-201ENST00000322099 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
PCBP4-201ENST00000322099 CUL7Q14999 1698 aa22.94■■□□□ 1.26
PCBP4-201ENST00000322099 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
PCBP4-201ENST00000322099 FHAD1B1AJZ9 1412 aa22.9■■□□□ 1.26
PCBP4-201ENST00000322099 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.251e-8■■■□□ 18.9
PCBP4-201ENST00000322099 LRRC9Q6ZRR7 1453 aa22.88■■□□□ 1.25
PCBP4-201ENST00000322099 RAB3GAP2Q9H2M9 1393 aa22.87■■□□□ 1.25
PCBP4-201ENST00000322099 ZNF608Q9ULD9 1512 aaPredicted RBP22.85■■□□□ 1.25
PCBP4-201ENST00000322099 MAPKBP1O60336 1514 aa22.84■■□□□ 1.25
PCBP4-201ENST00000322099 SETD5Q9C0A6 1442 aa22.84■■□□□ 1.25
PCBP4-201ENST00000322099 CFAP43Q8NDM7 1665 aa22.83■■□□□ 1.24
PCBP4-201ENST00000322099 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
PCBP4-201ENST00000322099 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
PCBP4-201ENST00000322099 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
PCBP4-201ENST00000322099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
PCBP4-201ENST00000322099 EFCAB5A4FU69 1503 aa22.75■■□□□ 1.23
PCBP4-201ENST00000322099 PHLDB1Q86UU1 1377 aa22.74■■□□□ 1.23
PCBP4-201ENST00000322099 ITGAEP38570 1179 aa22.72■■□□□ 1.23
PCBP4-201ENST00000322099 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
PCBP4-201ENST00000322099 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
PCBP4-201ENST00000322099 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
PCBP4-201ENST00000322099 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
PCBP4-201ENST00000322099 CTTNBP2Q8WZ74 1663 aa22.69■■□□□ 1.22
PCBP4-201ENST00000322099 SUPT16HQ9Y5B9 1047 aaKnown RBP22.68■■□□□ 1.22
PCBP4-201ENST00000322099 CASKIN1Q8WXD9 1431 aa22.67■■□□□ 1.22
PCBP4-201ENST00000322099 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
PCBP4-201ENST00000322099 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
PCBP4-201ENST00000322099 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
PCBP4-201ENST00000322099 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
PCBP4-201ENST00000322099 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
PCBP4-201ENST00000322099 FHOD3Q2V2M9 1422 aa22.56■■□□□ 1.2
PCBP4-201ENST00000322099 GRIN2AQ12879 1464 aa22.52■■□□□ 1.2
PCBP4-201ENST00000322099 SAMD9Q5K651 1589 aa22.51■■□□□ 1.19
PCBP4-201ENST00000322099 FGD6Q6ZV73 1430 aa22.5■■□□□ 1.19
PCBP4-201ENST00000322099 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
PCBP4-201ENST00000322099 IQGAP2Q13576 1575 aa22.49■■□□□ 1.19
PCBP4-201ENST00000322099 PPP1R15AO75807 674 aaPredicted RBP22.49■■□□□ 1.19
PCBP4-201ENST00000322099 SIN3AQ96ST3 1273 aa22.49■■□□□ 1.19
PCBP4-201ENST00000322099 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
PCBP4-201ENST00000322099 CCER2I3L3R5 266 aa22.45■■□□□ 1.18
PCBP4-201ENST00000322099 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
PCBP4-201ENST00000322099 HFM1A2PYH4 1435 aa22.45■■□□□ 1.18
PCBP4-201ENST00000322099 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
PCBP4-201ENST00000322099 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
PCBP4-201ENST00000322099 UACAQ9BZF9 1416 aa22.42■■□□□ 1.18
PCBP4-201ENST00000322099 FBLN2P98095 1184 aa22.42■■□□□ 1.18
PCBP4-201ENST00000322099 CCDC18Q5T9S5 1454 aa22.41■■□□□ 1.18
PCBP4-201ENST00000322099 MTUS2Q5JR59 1369 aa22.39■■□□□ 1.18
PCBP4-201ENST00000322099 KCNH8Q96L42 1107 aa22.39■■□□□ 1.17
PCBP4-201ENST00000322099 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
PCBP4-201ENST00000322099 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
PCBP4-201ENST00000322099 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
PCBP4-201ENST00000322099 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
PCBP4-201ENST00000322099 NUP160Q12769 1436 aa22.35■■□□□ 1.17
PCBP4-201ENST00000322099 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
PCBP4-201ENST00000322099 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
PCBP4-201ENST00000322099 ANP32CO43423 234 aa22.34■■□□□ 1.17
PCBP4-201ENST00000322099 TSHZ2Q9NRE2 1034 aa22.33■■□□□ 1.17
PCBP4-201ENST00000322099 SUPT6HQ7KZ85 1726 aaKnown RBP22.32■■□□□ 1.16
PCBP4-201ENST00000322099 NCOA2Q15596 1464 aa22.32■■□□□ 1.16
PCBP4-201ENST00000322099 DISP1Q96F81 1524 aa22.3■■□□□ 1.16
PCBP4-201ENST00000322099 NAIPQ13075 1403 aa22.3■■□□□ 1.16
PCBP4-201ENST00000322099 PTPRKQ15262 1439 aa22.3■■□□□ 1.16
PCBP4-201ENST00000322099 ARHGEF11O15085 1522 aa22.28■■□□□ 1.16
PCBP4-201ENST00000322099 LRRIQ1Q96JM4 1722 aa22.27■■□□□ 1.16
PCBP4-201ENST00000322099 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
PCBP4-201ENST00000322099 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
PCBP4-201ENST00000322099 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
PCBP4-201ENST00000322099 TCOF1Q13428 1488 aaKnown RBP22.23■■□□□ 1.15
PCBP4-201ENST00000322099 NEFLP07196 543 aa22.22■■□□□ 1.15
PCBP4-201ENST00000322099 FKBP8Q14318 412 aa22.2■■□□□ 1.14
PCBP4-201ENST00000322099 KDM5BQ9UGL1 1544 aa22.19■■□□□ 1.14
PCBP4-201ENST00000322099 CHD1O14646 1710 aa22.18■■□□□ 1.14
PCBP4-201ENST00000322099 GCC2Q8IWJ2 1684 aa22.18■■□□□ 1.14
PCBP4-201ENST00000322099 HECW1Q76N89 1606 aa22.17■■□□□ 1.14
PCBP4-201ENST00000322099 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
PCBP4-201ENST00000322099 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.14
PCBP4-201ENST00000322099 MIA2Q96PC5 1412 aa22.13■■□□□ 1.13
PCBP4-201ENST00000322099 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
PCBP4-201ENST00000322099 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
PCBP4-201ENST00000322099 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
PCBP4-201ENST00000322099 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
PCBP4-201ENST00000322099 BCANQ96GW7 911 aa22.06■■□□□ 1.12
PCBP4-201ENST00000322099 RAPGEF6Q8TEU7 1601 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms