RNA–Protein interactions for RNA: ENST00000322099.11

PCBP4-201, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 1,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-201ENST00000322099 NISCHQ9Y2I1 1504 aa32.85■■■□□ 2.85
PCBP4-201ENST00000322099 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
PCBP4-201ENST00000322099 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
PCBP4-201ENST00000322099 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
PCBP4-201ENST00000322099 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
PCBP4-201ENST00000322099 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
PCBP4-201ENST00000322099 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
PCBP4-201ENST00000322099 ABCC9O60706 1549 aa26.97■■□□□ 1.91
PCBP4-201ENST00000322099 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
PCBP4-201ENST00000322099 NACADO15069 1562 aa26.56■■□□□ 1.84
PCBP4-201ENST00000322099 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
PCBP4-201ENST00000322099 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
PCBP4-201ENST00000322099 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
PCBP4-201ENST00000322099 HRCP23327 699 aa26.11■■□□□ 1.77
PCBP4-201ENST00000322099 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
PCBP4-201ENST00000322099 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
PCBP4-201ENST00000322099 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
PCBP4-201ENST00000322099 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
PCBP4-201ENST00000322099 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
PCBP4-201ENST00000322099 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
PCBP4-201ENST00000322099 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
PCBP4-201ENST00000322099 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
PCBP4-201ENST00000322099 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
PCBP4-201ENST00000322099 BAZ1AQ9NRL2 1556 aaPredicted RBP25.33■■□□□ 1.64
PCBP4-201ENST00000322099 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
PCBP4-201ENST00000322099 PPARGC1BQ86YN6 1023 aaKnown RBP25.24■■□□□ 1.63
PCBP4-201ENST00000322099 SMARCA4P51532 1647 aa25.2■■□□□ 1.63
PCBP4-201ENST00000322099 WIZO95785 1651 aa25.19■■□□□ 1.62
PCBP4-201ENST00000322099 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
PCBP4-201ENST00000322099 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
PCBP4-201ENST00000322099 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
PCBP4-201ENST00000322099 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.57
PCBP4-201ENST00000322099 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
PCBP4-201ENST00000322099 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
PCBP4-201ENST00000322099 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
PCBP4-201ENST00000322099 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
PCBP4-201ENST00000322099 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
PCBP4-201ENST00000322099 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
PCBP4-201ENST00000322099 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
PCBP4-201ENST00000322099 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
PCBP4-201ENST00000322099 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
PCBP4-201ENST00000322099 EEA1Q15075 1411 aa24.4■■□□□ 1.5
PCBP4-201ENST00000322099 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
PCBP4-201ENST00000322099 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
PCBP4-201ENST00000322099 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
PCBP4-201ENST00000322099 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
PCBP4-201ENST00000322099 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
PCBP4-201ENST00000322099 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
PCBP4-201ENST00000322099 SOGA1O94964 1423 aa24.18■■□□□ 1.46
PCBP4-201ENST00000322099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
PCBP4-201ENST00000322099 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
PCBP4-201ENST00000322099 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
PCBP4-201ENST00000322099 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
PCBP4-201ENST00000322099 CFTRP13569 1480 aa24.05■■□□□ 1.44
PCBP4-201ENST00000322099 RUSC2Q8N2Y8 1516 aa24.01■■□□□ 1.43
PCBP4-201ENST00000322099 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
PCBP4-201ENST00000322099 KIF21BO75037 1637 aa23.98■■□□□ 1.43
PCBP4-201ENST00000322099 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
PCBP4-201ENST00000322099 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.42
PCBP4-201ENST00000322099 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
PCBP4-201ENST00000322099 DIEXFQ68CQ4 756 aaKnown RBP23.91■■□□□ 1.42
PCBP4-201ENST00000322099 ACIN1Q9UKV3 1341 aaKnown RBP23.89■■□□□ 1.41
PCBP4-201ENST00000322099 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
PCBP4-201ENST00000322099 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
PCBP4-201ENST00000322099 CENPBP07199 599 aaPredicted RBP23.81■■□□□ 1.4
PCBP4-201ENST00000322099 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
PCBP4-201ENST00000322099 CLIP1P30622 1438 aa23.79■■□□□ 1.4
PCBP4-201ENST00000322099 VPS8Q8N3P4 1428 aa23.77■■□□□ 1.4
PCBP4-201ENST00000322099 TTBK1Q5TCY1 1321 aaPredicted RBP23.77■■□□□ 1.4
PCBP4-201ENST00000322099 BIVM-ERCC5R4GMW8 1640 aa23.75■■□□□ 1.39
PCBP4-201ENST00000322099 CUX1P39880 1505 aa23.74■■□□□ 1.39
PCBP4-201ENST00000322099 NESP48681 1621 aa23.73■■□□□ 1.39
PCBP4-201ENST00000322099 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
PCBP4-201ENST00000322099 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
PCBP4-201ENST00000322099 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
PCBP4-201ENST00000322099 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
PCBP4-201ENST00000322099 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
PCBP4-201ENST00000322099 APLP2Q06481 763 aa23.6■■□□□ 1.37
PCBP4-201ENST00000322099 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
PCBP4-201ENST00000322099 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
PCBP4-201ENST00000322099 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
PCBP4-201ENST00000322099 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
PCBP4-201ENST00000322099 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
PCBP4-201ENST00000322099 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
PCBP4-201ENST00000322099 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.35
PCBP4-201ENST00000322099 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
PCBP4-201ENST00000322099 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
PCBP4-201ENST00000322099 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
PCBP4-201ENST00000322099 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.33
PCBP4-201ENST00000322099 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
PCBP4-201ENST00000322099 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
PCBP4-201ENST00000322099 CUX2O14529 1486 aa23.33■■□□□ 1.33
PCBP4-201ENST00000322099 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
PCBP4-201ENST00000322099 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
PCBP4-201ENST00000322099 MIER1Q8N108 512 aa23.29■■□□□ 1.32
PCBP4-201ENST00000322099 RRBP1Q9P2E9 1410 aaKnown RBP23.28■■□□□ 1.32
PCBP4-201ENST00000322099 DHX57Q6P158 1386 aaKnown RBP23.26■■□□□ 1.31
PCBP4-201ENST00000322099 ABCA10Q8WWZ4 1543 aa23.24■■□□□ 1.31
PCBP4-201ENST00000322099 IGF1RP08069 1367 aa23.24■■□□□ 1.31
PCBP4-201ENST00000322099 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms