RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 CCER2I3L3R5 266 aa23.15■■□□□ 1.3
PDE1C-201ENST00000321453 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
PDE1C-201ENST00000321453 CUX2O14529 1486 aa23.11■■□□□ 1.29
PDE1C-201ENST00000321453 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
PDE1C-201ENST00000321453 B4GALNT3Q6L9W6 998 aa23.05■■□□□ 1.28
PDE1C-201ENST00000321453 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
PDE1C-201ENST00000321453 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
PDE1C-201ENST00000321453 SETD5Q9C0A6 1442 aa23.01■■□□□ 1.27
PDE1C-201ENST00000321453 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
PDE1C-201ENST00000321453 NOP58Q9Y2X3 529 aaKnown RBP22.95■■□□□ 1.26
PDE1C-201ENST00000321453 PPP4R2Q9NY27 417 aa22.94■■□□□ 1.26
PDE1C-201ENST00000321453 SALL2Q9Y467 1007 aaPredicted RBP22.93■■□□□ 1.26
PDE1C-201ENST00000321453 RTN4Q9NQC3 1192 aaKnown RBP22.91■■□□□ 1.26
PDE1C-201ENST00000321453 CCDC136Q96JN2 1154 aa22.91■■□□□ 1.26
PDE1C-201ENST00000321453 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
PDE1C-201ENST00000321453 PRXQ9BXM0 1461 aa22.89■■□□□ 1.25
PDE1C-201ENST00000321453 CCDC184Q52MB2 194 aa22.87■■□□□ 1.25
PDE1C-201ENST00000321453 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
PDE1C-201ENST00000321453 PHLDB1Q86UU1 1377 aa22.84■■□□□ 1.25
PDE1C-201ENST00000321453 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
PDE1C-201ENST00000321453 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
PDE1C-201ENST00000321453 FAM9BQ8IZU0 186 aa22.83■■□□□ 1.25
PDE1C-201ENST00000321453 IL27Q8NEV9 243 aa22.83■■□□□ 1.24
PDE1C-201ENST00000321453 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
PDE1C-201ENST00000321453 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
PDE1C-201ENST00000321453 RTL5Q5HYW3 569 aaPredicted RBP22.77■■□□□ 1.24
PDE1C-201ENST00000321453 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
PDE1C-201ENST00000321453 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.76■■□□□ 1.23
PDE1C-201ENST00000321453 SENP3-EIF4A1A0A087X0R7 540 aa22.76■■□□□ 1.23
PDE1C-201ENST00000321453 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
PDE1C-201ENST00000321453 TIMELESSQ9UNS1 1208 aa22.74■■□□□ 1.23
PDE1C-201ENST00000321453 TIAM1Q13009 1591 aa22.7■■□□□ 1.22
PDE1C-201ENST00000321453 ERICH6BQ5W0A0 696 aa22.69■■□□□ 1.22
PDE1C-201ENST00000321453 WASHC2AQ641Q2 1341 aa22.68■■□□□ 1.22
PDE1C-201ENST00000321453 ANP32AP39687 249 aaKnown RBP22.68■■□□□ 1.22
PDE1C-201ENST00000321453 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
PDE1C-201ENST00000321453 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
PDE1C-201ENST00000321453 ZBTB47Q9UFB7 747 aaPredicted RBP22.65■■□□□ 1.22
PDE1C-201ENST00000321453 HSPA5P11021 654 aaKnown RBP22.64■■□□□ 1.22
PDE1C-201ENST00000321453 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.21
PDE1C-201ENST00000321453 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
PDE1C-201ENST00000321453 IPO9Q96P70 1041 aaKnown RBP22.63■■□□□ 1.21
PDE1C-201ENST00000321453 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
PDE1C-201ENST00000321453 LAS1LQ9Y4W2 734 aaKnown RBP22.59■■□□□ 1.21
PDE1C-201ENST00000321453 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
PDE1C-201ENST00000321453 AKNAQ7Z591 1439 aa22.58■■□□□ 1.2
PDE1C-201ENST00000321453 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
PDE1C-201ENST00000321453 ZBED9Q6R2W3 1325 aa22.53■■□□□ 1.2
PDE1C-201ENST00000321453 CUX1P39880 1505 aa22.52■■□□□ 1.2
PDE1C-201ENST00000321453 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
PDE1C-201ENST00000321453 PRKRIP1Q9H875 184 aaPredicted RBP22.52■■□□□ 1.2
PDE1C-201ENST00000321453 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
PDE1C-201ENST00000321453 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
PDE1C-201ENST00000321453 NEFMP07197 916 aa22.48■■□□□ 1.19
PDE1C-201ENST00000321453 CNTLNQ9NXG0 1405 aa22.46■■□□□ 1.19
PDE1C-201ENST00000321453 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDE1C-201ENST00000321453 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
PDE1C-201ENST00000321453 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.18
PDE1C-201ENST00000321453 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
PDE1C-201ENST00000321453 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
PDE1C-201ENST00000321453 POLR3GLQ9BT43 218 aa22.41■■□□□ 1.18
PDE1C-201ENST00000321453 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
PDE1C-201ENST00000321453 KDM5BQ9UGL1 1544 aa22.4■■□□□ 1.18
PDE1C-201ENST00000321453 UACAQ9BZF9 1416 aa22.39■■□□□ 1.18
PDE1C-201ENST00000321453 FHOD3Q2V2M9 1422 aa22.38■■□□□ 1.17
PDE1C-201ENST00000321453 RRP7BPQ9NSQ0 103 aa22.37■■□□□ 1.17
PDE1C-201ENST00000321453 CHIC2Q9UKJ5 165 aa22.37■■□□□ 1.17
PDE1C-201ENST00000321453 BRPF3Q9ULD4 1205 aa22.37■■□□□ 1.17
PDE1C-201ENST00000321453 EIF5BO60841 1220 aaKnown RBP22.36■■□□□ 1.17
PDE1C-201ENST00000321453 FOXD1Q16676 465 aa22.36■■□□□ 1.17
PDE1C-201ENST00000321453 IGF1RP08069 1367 aa22.36■■□□□ 1.17
PDE1C-201ENST00000321453 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
PDE1C-201ENST00000321453 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
PDE1C-201ENST00000321453 CFAP43Q8NDM7 1665 aa22.33■■□□□ 1.17
PDE1C-201ENST00000321453 NCOA2Q15596 1464 aa22.33■■□□□ 1.17
PDE1C-201ENST00000321453 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.16
PDE1C-201ENST00000321453 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
PDE1C-201ENST00000321453 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
PDE1C-201ENST00000321453 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
PDE1C-201ENST00000321453 HFM1A2PYH4 1435 aa22.28■■□□□ 1.16
PDE1C-201ENST00000321453 SMG6Q86US8 1419 aaKnown RBP22.28■■□□□ 1.16
PDE1C-201ENST00000321453 NAIPQ13075 1403 aa22.27■■□□□ 1.16
PDE1C-201ENST00000321453 KIF7Q2M1P5 1343 aa22.25■■□□□ 1.15
PDE1C-201ENST00000321453 SKAP1Q86WV1 359 aa22.25■■□□□ 1.15
PDE1C-201ENST00000321453 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
PDE1C-201ENST00000321453 PDE4AP27815 886 aa22.23■■□□□ 1.15
PDE1C-201ENST00000321453 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
PDE1C-201ENST00000321453 EXOC6Q8TAG9 804 aa22.23■■□□□ 1.15
PDE1C-201ENST00000321453 NBPF8Q3BBV2 869 aa22.21■■□□□ 1.15
PDE1C-201ENST00000321453 UBE2Q2Q8WVN8 375 aa22.21■■□□□ 1.15
PDE1C-201ENST00000321453 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
PDE1C-201ENST00000321453 FMN1Q68DA7 1419 aa22.2■■□□□ 1.14
PDE1C-201ENST00000321453 SLC4A3P48751 1232 aa22.19■■□□□ 1.14
PDE1C-201ENST00000321453 RNF123Q5XPI4 1314 aa22.19■■□□□ 1.14
PDE1C-201ENST00000321453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
PDE1C-201ENST00000321453 WASHC2CQ9Y4E1 1318 aa22.17■■□□□ 1.14
PDE1C-201ENST00000321453 USP35Q9P2H5 1018 aa22.14■■□□□ 1.14
PDE1C-201ENST00000321453 FYCO1Q9BQS8 1478 aa22.13■■□□□ 1.13
PDE1C-201ENST00000321453 PPM1GO15355 546 aaPredicted RBP22.13■■□□□ 1.13
PDE1C-201ENST00000321453 DENND4BO75064 1496 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms