RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MAGI1Q96QZ7 1491 aaPredicted RBP11.39□□□□□ -0.59
NPHP1-201ENST00000316534 TIAM1Q13009 1591 aa11.38□□□□□ -0.59
NPHP1-201ENST00000316534 SNAPC4Q5SXM2 1469 aa11.37□□□□□ -0.59
NPHP1-201ENST00000316534 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
NPHP1-201ENST00000316534 PCF11O94913 1555 aaKnown RBP11.37□□□□□ -0.59
NPHP1-201ENST00000316534 IQGAP2Q13576 1575 aa11.36□□□□□ -0.59
NPHP1-201ENST00000316534 FYCO1Q9BQS8 1478 aa11.36□□□□□ -0.59
NPHP1-201ENST00000316534 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
NPHP1-201ENST00000316534 TDRD9Q8NDG6 1382 aaKnown RBP11.33□□□□□ -0.6
NPHP1-201ENST00000316534 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
NPHP1-201ENST00000316534 CEP170Q5SW79 1584 aa11.32□□□□□ -0.6
NPHP1-201ENST00000316534 CASKIN1Q8WXD9 1431 aa11.32□□□□□ -0.6
NPHP1-201ENST00000316534 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
NPHP1-201ENST00000316534 SYNJ2O15056 1496 aa11.3□□□□□ -0.6
NPHP1-201ENST00000316534 NUP160Q12769 1436 aa11.3□□□□□ -0.6
NPHP1-201ENST00000316534 KIAA0556O60303 1618 aa11.3□□□□□ -0.6
NPHP1-201ENST00000316534 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
NPHP1-201ENST00000316534 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
NPHP1-201ENST00000316534 KIAA0586Q9BVV6 1533 aa11.29□□□□□ -0.6
NPHP1-201ENST00000316534 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
NPHP1-201ENST00000316534 DISP1Q96F81 1524 aa11.27□□□□□ -0.61
NPHP1-201ENST00000316534 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
NPHP1-201ENST00000316534 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
NPHP1-201ENST00000316534 FMN1Q68DA7 1419 aa11.25□□□□□ -0.61
NPHP1-201ENST00000316534 HECW1Q76N89 1606 aa11.24□□□□□ -0.61
NPHP1-201ENST00000316534 CHD1O14646 1710 aa11.24□□□□□ -0.61
NPHP1-201ENST00000316534 HRCP23327 699 aa11.24□□□□□ -0.61
NPHP1-201ENST00000316534 ADCY10Q96PN6 1610 aa11.21□□□□□ -0.61
NPHP1-201ENST00000316534 CCDC18Q5T9S5 1454 aa11.21□□□□□ -0.62
NPHP1-201ENST00000316534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPHP1-201ENST00000316534 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
NPHP1-201ENST00000316534 FHOD3Q2V2M9 1422 aa11.2□□□□□ -0.62
NPHP1-201ENST00000316534 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
NPHP1-201ENST00000316534 RAPGEF6Q8TEU7 1601 aa11.18□□□□□ -0.62
NPHP1-201ENST00000316534 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
NPHP1-201ENST00000316534 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
NPHP1-201ENST00000316534 MAGI3Q5TCQ9 1506 aa11.17□□□□□ -0.62
NPHP1-201ENST00000316534 ABCA8O94911 1581 aa11.16□□□□□ -0.62
NPHP1-201ENST00000316534 TCOF1Q13428 1488 aaKnown RBP11.12□□□□□ -0.63
NPHP1-201ENST00000316534 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
NPHP1-201ENST00000316534 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
NPHP1-201ENST00000316534 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
NPHP1-201ENST00000316534 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
NPHP1-201ENST00000316534 GCC2Q8IWJ2 1684 aa11.07□□□□□ -0.64
NPHP1-201ENST00000316534 CCNB3Q8WWL7 1395 aa11.06□□□□□ -0.64
NPHP1-201ENST00000316534 ITSN2Q9NZM3 1697 aa11.05□□□□□ -0.64
NPHP1-201ENST00000316534 PTPN23Q9H3S7 1636 aa11.05□□□□□ -0.64
NPHP1-201ENST00000316534 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
NPHP1-201ENST00000316534 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
NPHP1-201ENST00000316534 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
NPHP1-201ENST00000316534 FGD6Q6ZV73 1430 aa11.02□□□□□ -0.65
NPHP1-201ENST00000316534 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
NPHP1-201ENST00000316534 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.65
NPHP1-201ENST00000316534 AKNAQ7Z591 1439 aa11.02□□□□□ -0.65
NPHP1-201ENST00000316534 MIA2Q96PC5 1412 aa11.02□□□□□ -0.65
NPHP1-201ENST00000316534 CDC42BPAQ5VT25 1732 aa11□□□□□ -0.65
NPHP1-201ENST00000316534 UHRF1BP1LA0JNW5 1464 aa11□□□□□ -0.65
NPHP1-201ENST00000316534 CARMIL2Q6F5E8 1435 aa11□□□□□ -0.65
NPHP1-201ENST00000316534 DNMT1P26358 1616 aaKnown RBP11□□□□□ -0.65
NPHP1-201ENST00000316534 PPARGC1BQ86YN6 1023 aaKnown RBP11□□□□□ -0.65
NPHP1-201ENST00000316534 APLP2Q06481 763 aa10.99□□□□□ -0.65
NPHP1-201ENST00000316534 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
NPHP1-201ENST00000316534 ABCC10Q5T3U5 1492 aa10.98□□□□□ -0.65
NPHP1-201ENST00000316534 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
NPHP1-201ENST00000316534 KIF14Q15058 1648 aa10.97□□□□□ -0.65
NPHP1-201ENST00000316534 KDM5BQ9UGL1 1544 aa10.96□□□□□ -0.65
NPHP1-201ENST00000316534 ABCC2Q92887 1545 aa10.96□□□□□ -0.66
NPHP1-201ENST00000316534 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.66
NPHP1-201ENST00000316534 ERCC6L2Q5T890 1561 aa10.95□□□□□ -0.66
NPHP1-201ENST00000316534 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
NPHP1-201ENST00000316534 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
NPHP1-201ENST00000316534 MAPKBP1O60336 1514 aa10.94□□□□□ -0.66
NPHP1-201ENST00000316534 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
NPHP1-201ENST00000316534 ATP10BO94823 1461 aa10.94□□□□□ -0.66
NPHP1-201ENST00000316534 CDC42BPBQ9Y5S2 1711 aa10.93□□□□□ -0.66
NPHP1-201ENST00000316534 HFM1A2PYH4 1435 aa10.93□□□□□ -0.66
NPHP1-201ENST00000316534 PRG4Q92954 1404 aaPredicted RBP10.93□□□□□ -0.66
NPHP1-201ENST00000316534 JPH4Q96JJ6 628 aa10.93□□□□□ -0.66
NPHP1-201ENST00000316534 DHX57Q6P158 1386 aaKnown RBP10.92□□□□□ -0.66
NPHP1-201ENST00000316534 ZCCHC11Q5TAX3 1644 aaKnown RBP10.92□□□□□ -0.66
NPHP1-201ENST00000316534 ARHGEF5Q12774 1597 aa10.92□□□□□ -0.66
NPHP1-201ENST00000316534 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
NPHP1-201ENST00000316534 RANGAP1P46060 587 aaPredicted RBP10.91□□□□□ -0.66
NPHP1-201ENST00000316534 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
NPHP1-201ENST00000316534 ADGRL2O95490 1459 aa10.9□□□□□ -0.66
NPHP1-201ENST00000316534 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
NPHP1-201ENST00000316534 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
NPHP1-201ENST00000316534 ARAP3Q8WWN8 1544 aa10.89□□□□□ -0.67
NPHP1-201ENST00000316534 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
NPHP1-201ENST00000316534 SHANK2Q9UPX8 1470 aa10.89□□□□□ -0.67
NPHP1-201ENST00000316534 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
NPHP1-201ENST00000316534 ROCK1Q13464 1354 aa10.88□□□□□ -0.67
NPHP1-201ENST00000316534 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
NPHP1-201ENST00000316534 MYO5CQ9NQX4 1742 aa10.87□□□□□ -0.67
NPHP1-201ENST00000316534 NAIPQ13075 1403 aa10.86□□□□□ -0.67
NPHP1-201ENST00000316534 CAMSAP2Q08AD1 1489 aa10.85□□□□□ -0.67
NPHP1-201ENST00000316534 RAB3GAP2Q9H2M9 1393 aa10.85□□□□□ -0.67
NPHP1-201ENST00000316534 KDM6BO15054 1643 aa10.84□□□□□ -0.67
NPHP1-201ENST00000316534 TTC37Q6PGP7 1564 aa10.84□□□□□ -0.67
NPHP1-201ENST00000316534 SAMD9LQ8IVG5 1584 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms