RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
CHMP2A-201ENST00000312547 GOLGA3Q08378 1498 aa20.76■□□□□ 0.91
CHMP2A-201ENST00000312547 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
CHMP2A-201ENST00000312547 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
CHMP2A-201ENST00000312547 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
CHMP2A-201ENST00000312547 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
CHMP2A-201ENST00000312547 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
CHMP2A-201ENST00000312547 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
CHMP2A-201ENST00000312547 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
CHMP2A-201ENST00000312547 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
CHMP2A-201ENST00000312547 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
CHMP2A-201ENST00000312547 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
CHMP2A-201ENST00000312547 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
CHMP2A-201ENST00000312547 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
CHMP2A-201ENST00000312547 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
CHMP2A-201ENST00000312547 ARAP1Q96P48 1450 aa20.52■□□□□ 0.88
CHMP2A-201ENST00000312547 DISP1Q96F81 1524 aa20.5■□□□□ 0.87
CHMP2A-201ENST00000312547 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
CHMP2A-201ENST00000312547 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
CHMP2A-201ENST00000312547 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
CHMP2A-201ENST00000312547 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
CHMP2A-201ENST00000312547 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
CHMP2A-201ENST00000312547 KIAA0556O60303 1618 aa20.43■□□□□ 0.86
CHMP2A-201ENST00000312547 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
CHMP2A-201ENST00000312547 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
CHMP2A-201ENST00000312547 CLIP1P30622 1438 aa20.41■□□□□ 0.86
CHMP2A-201ENST00000312547 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
CHMP2A-201ENST00000312547 P3H3Q8IVL6 736 aa20.36■□□□□ 0.85
CHMP2A-201ENST00000312547 PTPRGP23470 1445 aa20.35■□□□□ 0.85
CHMP2A-201ENST00000312547 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
CHMP2A-201ENST00000312547 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
CHMP2A-201ENST00000312547 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
CHMP2A-201ENST00000312547 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-201ENST00000312547 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
CHMP2A-201ENST00000312547 PLB1Q6P1J6 1458 aa20.22■□□□□ 0.83
CHMP2A-201ENST00000312547 ABCA8O94911 1581 aa20.21■□□□□ 0.83
CHMP2A-201ENST00000312547 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
CHMP2A-201ENST00000312547 ABCC2Q92887 1545 aa20.17■□□□□ 0.82
CHMP2A-201ENST00000312547 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
CHMP2A-201ENST00000312547 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
CHMP2A-201ENST00000312547 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
CHMP2A-201ENST00000312547 ADCY10Q96PN6 1610 aa20.14■□□□□ 0.81
CHMP2A-201ENST00000312547 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
CHMP2A-201ENST00000312547 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
CHMP2A-201ENST00000312547 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
CHMP2A-201ENST00000312547 FYCO1Q9BQS8 1478 aa20.1■□□□□ 0.81
CHMP2A-201ENST00000312547 ATP10BO94823 1461 aa20.06■□□□□ 0.8
CHMP2A-201ENST00000312547 HECW1Q76N89 1606 aa20.06■□□□□ 0.8
CHMP2A-201ENST00000312547 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
CHMP2A-201ENST00000312547 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
CHMP2A-201ENST00000312547 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHMP2A-201ENST00000312547 ARID3CA6NKF2 412 aa20■□□□□ 0.79
CHMP2A-201ENST00000312547 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
CHMP2A-201ENST00000312547 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-201ENST00000312547 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-201ENST00000312547 KIF13AQ9H1H9 1805 aa19.97■□□□□ 0.79
CHMP2A-201ENST00000312547 MAPKBP1O60336 1514 aa19.97■□□□□ 0.79
CHMP2A-201ENST00000312547 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
CHMP2A-201ENST00000312547 ASXL2Q76L83 1435 aa19.94■□□□□ 0.78
CHMP2A-201ENST00000312547 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
CHMP2A-201ENST00000312547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
CHMP2A-201ENST00000312547 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
CHMP2A-201ENST00000312547 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
CHMP2A-201ENST00000312547 TIAM1Q13009 1591 aa19.9■□□□□ 0.78
CHMP2A-201ENST00000312547 PLEKHD1A6NEE1 506 aa19.89■□□□□ 0.77
CHMP2A-201ENST00000312547 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
CHMP2A-201ENST00000312547 CFAP43Q8NDM7 1665 aa19.87■□□□□ 0.77
CHMP2A-201ENST00000312547 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
CHMP2A-201ENST00000312547 TROQ12816 1431 aaPredicted RBP19.87■□□□□ 0.77
CHMP2A-201ENST00000312547 APLP2Q06481 763 aa19.85■□□□□ 0.77
CHMP2A-201ENST00000312547 KANK4Q5T7N3 995 aaPredicted RBP19.83■□□□□ 0.77
CHMP2A-201ENST00000312547 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.76
CHMP2A-201ENST00000312547 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
CHMP2A-201ENST00000312547 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
CHMP2A-201ENST00000312547 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
CHMP2A-201ENST00000312547 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
CHMP2A-201ENST00000312547 GLI2P10070 1586 aa19.78■□□□□ 0.76
CHMP2A-201ENST00000312547 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
CHMP2A-201ENST00000312547 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
CHMP2A-201ENST00000312547 KIF14Q15058 1648 aa19.75■□□□□ 0.75
CHMP2A-201ENST00000312547 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
CHMP2A-201ENST00000312547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHMP2A-201ENST00000312547 ABCA9Q8IUA7 1624 aa19.72■□□□□ 0.75
CHMP2A-201ENST00000312547 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CHMP2A-201ENST00000312547 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
CHMP2A-201ENST00000312547 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
CHMP2A-201ENST00000312547 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
CHMP2A-201ENST00000312547 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
CHMP2A-201ENST00000312547 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
CHMP2A-201ENST00000312547 PLCH2O75038 1416 aa19.65■□□□□ 0.74
CHMP2A-201ENST00000312547 GPATCH8Q9UKJ3 1502 aaKnown RBP19.65■□□□□ 0.74
CHMP2A-201ENST00000312547 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
CHMP2A-201ENST00000312547 TSPOAP1O95153 1857 aa19.62■□□□□ 0.73
CHMP2A-201ENST00000312547 ARAP3Q8WWN8 1544 aa19.62■□□□□ 0.73
CHMP2A-201ENST00000312547 PHLDB1Q86UU1 1377 aa19.62■□□□□ 0.73
CHMP2A-201ENST00000312547 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
CHMP2A-201ENST00000312547 PREX2Q70Z35 1606 aa19.58■□□□□ 0.72
CHMP2A-201ENST00000312547 PPRC1Q5VV67 1664 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-201ENST00000312547 CDC42BPAQ5VT25 1732 aa19.56■□□□□ 0.72
CHMP2A-201ENST00000312547 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms