RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
HERPUD2-201ENST00000311350 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
HERPUD2-201ENST00000311350 FBLN2P98095 1184 aa28.15■■■□□ 2.1
HERPUD2-201ENST00000311350 MIER1Q8N108 512 aa28.14■■■□□ 2.1
HERPUD2-201ENST00000311350 GAPVD1Q14C86 1478 aa28.13■■■□□ 2.09
HERPUD2-201ENST00000311350 MAGI1Q96QZ7 1491 aaPredicted RBP28.11■■■□□ 2.09
HERPUD2-201ENST00000311350 CHD1O14646 1710 aa28.1■■■□□ 2.09
HERPUD2-201ENST00000311350 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.08
HERPUD2-201ENST00000311350 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
HERPUD2-201ENST00000311350 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
HERPUD2-201ENST00000311350 CLIP1P30622 1438 aa28.02■■■□□ 2.08
HERPUD2-201ENST00000311350 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
HERPUD2-201ENST00000311350 SYNJ2O15056 1496 aa28■■■□□ 2.07
HERPUD2-201ENST00000311350 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
HERPUD2-201ENST00000311350 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
HERPUD2-201ENST00000311350 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
HERPUD2-201ENST00000311350 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
HERPUD2-201ENST00000311350 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
HERPUD2-201ENST00000311350 RAPGEF2Q9Y4G8 1499 aa27.85■■■□□ 2.05
HERPUD2-201ENST00000311350 CLASP1Q7Z460 1538 aa27.84■■■□□ 2.05
HERPUD2-201ENST00000311350 ADAMTS12P58397 1594 aa27.83■■■□□ 2.05
HERPUD2-201ENST00000311350 FHAD1B1AJZ9 1412 aa27.81■■■□□ 2.04
HERPUD2-201ENST00000311350 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
HERPUD2-201ENST00000311350 APLP2Q06481 763 aa27.72■■■□□ 2.03
HERPUD2-201ENST00000311350 KIF27Q86VH2 1401 aa27.72■■■□□ 2.03
HERPUD2-201ENST00000311350 PRXQ9BXM0 1461 aa27.72■■■□□ 2.03
HERPUD2-201ENST00000311350 CYB5RLQ6IPT4 315 aa27.7■■■□□ 2.03
HERPUD2-201ENST00000311350 NUP160Q12769 1436 aa27.69■■■□□ 2.02
HERPUD2-201ENST00000311350 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
HERPUD2-201ENST00000311350 SUPT16HQ9Y5B9 1047 aaKnown RBP27.67■■■□□ 2.02
HERPUD2-201ENST00000311350 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
HERPUD2-201ENST00000311350 CLSPNQ9HAW4 1339 aa27.66■■■□□ 2.02
HERPUD2-201ENST00000311350 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
HERPUD2-201ENST00000311350 IGF1RP08069 1367 aa27.64■■■□□ 2.02
HERPUD2-201ENST00000311350 TSHZ2Q9NRE2 1034 aa27.57■■■□□ 2
HERPUD2-201ENST00000311350 ANP32EQ9BTT0 268 aa27.54■■■□□ 2
HERPUD2-201ENST00000311350 CUL7Q14999 1698 aa27.53■■■□□ 2
HERPUD2-201ENST00000311350 BCL11AQ9H165 835 aa27.5■■□□□ 1.99
HERPUD2-201ENST00000311350 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
HERPUD2-201ENST00000311350 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
HERPUD2-201ENST00000311350 RRBP1Q9P2E9 1410 aaKnown RBP27.45■■□□□ 1.98
HERPUD2-201ENST00000311350 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
HERPUD2-201ENST00000311350 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
HERPUD2-201ENST00000311350 DHX57Q6P158 1386 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-201ENST00000311350 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
HERPUD2-201ENST00000311350 KIAA0586Q9BVV6 1533 aa27.37■■□□□ 1.97
HERPUD2-201ENST00000311350 ARHGAP35Q9NRY4 1499 aa27.28■■□□□ 1.96
HERPUD2-201ENST00000311350 MAP3K1Q13233 1512 aa27.27■■□□□ 1.96
HERPUD2-201ENST00000311350 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
HERPUD2-201ENST00000311350 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
HERPUD2-201ENST00000311350 TRHP20396 242 aaPredicted RBP27.22■■□□□ 1.95
HERPUD2-201ENST00000311350 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
HERPUD2-201ENST00000311350 BCANQ96GW7 911 aa27.19■■□□□ 1.94
HERPUD2-201ENST00000311350 IQGAP2Q13576 1575 aa27.16■■□□□ 1.94
HERPUD2-201ENST00000311350 KCNH8Q96L42 1107 aa27.14■■□□□ 1.94
HERPUD2-201ENST00000311350 CARMIL2Q6F5E8 1435 aa27.09■■□□□ 1.93
HERPUD2-201ENST00000311350 TIAM1Q13009 1591 aa27.08■■□□□ 1.93
HERPUD2-201ENST00000311350 PTPRGP23470 1445 aa27.03■■□□□ 1.92
HERPUD2-201ENST00000311350 UGGT2Q9NYU1 1516 aa27.02■■□□□ 1.92
HERPUD2-201ENST00000311350 DISP1Q96F81 1524 aa27■■□□□ 1.91
HERPUD2-201ENST00000311350 FKBP8Q14318 412 aa26.97■■□□□ 1.91
HERPUD2-201ENST00000311350 ADCY10Q96PN6 1610 aa26.96■■□□□ 1.91
HERPUD2-201ENST00000311350 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
HERPUD2-201ENST00000311350 LRRC9Q6ZRR7 1453 aa26.96■■□□□ 1.91
HERPUD2-201ENST00000311350 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.9
HERPUD2-201ENST00000311350 CFAP43Q8NDM7 1665 aa26.93■■□□□ 1.9
HERPUD2-201ENST00000311350 MAPKBP1O60336 1514 aa26.93■■□□□ 1.9
HERPUD2-201ENST00000311350 RAB3GAP2Q9H2M9 1393 aa26.93■■□□□ 1.9
HERPUD2-201ENST00000311350 RBM19Q9Y4C8 960 aaKnown RBP26.91■■□□□ 1.9
HERPUD2-201ENST00000311350 KIAA0556O60303 1618 aa26.9■■□□□ 1.9
HERPUD2-201ENST00000311350 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
HERPUD2-201ENST00000311350 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
HERPUD2-201ENST00000311350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.83■■□□□ 1.89
HERPUD2-201ENST00000311350 UHRF1BP1LA0JNW5 1464 aa26.82■■□□□ 1.88
HERPUD2-201ENST00000311350 EFCAB5A4FU69 1503 aa26.82■■□□□ 1.88
HERPUD2-201ENST00000311350 ABCC2Q92887 1545 aa26.81■■□□□ 1.88
HERPUD2-201ENST00000311350 TIMELESSQ9UNS1 1208 aa26.8■■□□□ 1.88
HERPUD2-201ENST00000311350 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
HERPUD2-201ENST00000311350 ITGAEP38570 1179 aa26.79■■□□□ 1.88
HERPUD2-201ENST00000311350 PCF11O94913 1555 aaKnown RBP26.78■■□□□ 1.88
HERPUD2-201ENST00000311350 ABCC10Q5T3U5 1492 aa26.78■■□□□ 1.88
HERPUD2-201ENST00000311350 FYCO1Q9BQS8 1478 aa26.78■■□□□ 1.88
HERPUD2-201ENST00000311350 FAM69CQ0P6D2 419 aa26.75■■□□□ 1.87
HERPUD2-201ENST00000311350 MSH5O43196 834 aa26.73■■□□□ 1.87
HERPUD2-201ENST00000311350 KIF13AQ9H1H9 1805 aa26.73■■□□□ 1.87
HERPUD2-201ENST00000311350 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
HERPUD2-201ENST00000311350 DIP2BQ9P265 1576 aa26.7■■□□□ 1.86
HERPUD2-201ENST00000311350 PLB1Q6P1J6 1458 aa26.69■■□□□ 1.86
HERPUD2-201ENST00000311350 KDM5BQ9UGL1 1544 aa26.69■■□□□ 1.86
HERPUD2-201ENST00000311350 P3H3Q8IVL6 736 aa26.67■■□□□ 1.86
HERPUD2-201ENST00000311350 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
HERPUD2-201ENST00000311350 DDX10Q13206 875 aaKnown RBP26.65■■□□□ 1.86
HERPUD2-201ENST00000311350 SAMD9Q5K651 1589 aa26.64■■□□□ 1.86
HERPUD2-201ENST00000311350 ABCA8O94911 1581 aa26.63■■□□□ 1.85
HERPUD2-201ENST00000311350 NEFLP07196 543 aa26.6■■□□□ 1.85
HERPUD2-201ENST00000311350 TRIM52Q96A61 297 aa26.6■■□□□ 1.85
HERPUD2-201ENST00000311350 ZCCHC11Q5TAX3 1644 aaKnown RBP26.6■■□□□ 1.85
HERPUD2-201ENST00000311350 FHOD3Q2V2M9 1422 aa26.59■■□□□ 1.85
HERPUD2-201ENST00000311350 FMN1Q68DA7 1419 aa26.58■■□□□ 1.85
HERPUD2-201ENST00000311350 FAM50AQ14320 339 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms