RNA–Protein interactions for RNA: ENST00000309902.10

ZNF407-202, Transcript of zinc finger protein 407, humanhuman

TSL 2 BASIC

Gene ZNF407, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-202ENST00000309902 NEFMP07197 916 aa10.11□□□□□ -0.79
ZNF407-202ENST00000309902 ANP32CO43423 234 aa10.09□□□□□ -0.79
ZNF407-202ENST00000309902 HMGXB3Q12766 1538 aa10.09□□□□□ -0.79
ZNF407-202ENST00000309902 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
ZNF407-202ENST00000309902 CFDP1Q9UEE9 299 aaPredicted RBP10.06□□□□□ -0.8
ZNF407-202ENST00000309902 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
ZNF407-202ENST00000309902 CCNB3Q8WWL7 1395 aa10.05□□□□□ -0.8
ZNF407-202ENST00000309902 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
ZNF407-202ENST00000309902 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
ZNF407-202ENST00000309902 CHGAP10645 457 aaKnown RBP10.03□□□□□ -0.8
ZNF407-202ENST00000309902 KANK1Q14678 1352 aa10□□□□□ -0.81
ZNF407-202ENST00000309902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10□□□□□ -0.81
ZNF407-202ENST00000309902 CHIC2Q9UKJ5 165 aa9.99□□□□□ -0.81
ZNF407-202ENST00000309902 TDRD9Q8NDG6 1382 aaKnown RBP9.98□□□□□ -0.81
ZNF407-202ENST00000309902 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
ZNF407-202ENST00000309902 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
ZNF407-202ENST00000309902 ARHGAP35Q9NRY4 1499 aa9.96□□□□□ -0.81
ZNF407-202ENST00000309902 MRC2Q9UBG0 1479 aa9.96□□□□□ -0.82
ZNF407-202ENST00000309902 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.82
ZNF407-202ENST00000309902 CLSPNQ9HAW4 1339 aa9.95□□□□□ -0.82
ZNF407-202ENST00000309902 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
ZNF407-202ENST00000309902 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
ZNF407-202ENST00000309902 FKBP8Q14318 412 aa9.95□□□□□ -0.82
ZNF407-202ENST00000309902 ARID4BQ4LE39 1312 aaPredicted RBP9.94□□□□□ -0.82
ZNF407-202ENST00000309902 PPP1R15AO75807 674 aaPredicted RBP9.94□□□□□ -0.82
ZNF407-202ENST00000309902 CFTRP13569 1480 aa9.94□□□□□ -0.82
ZNF407-202ENST00000309902 NPM2Q86SE8 214 aaKnown RBP9.94□□□□□ -0.82
ZNF407-202ENST00000309902 ANP32EQ9BTT0 268 aa9.94□□□□□ -0.82
ZNF407-202ENST00000309902 RSPH4AQ5TD94 716 aa9.93□□□□□ -0.82
ZNF407-202ENST00000309902 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
ZNF407-202ENST00000309902 CDCA8Q53HL2 280 aa9.93□□□□□ -0.82
ZNF407-202ENST00000309902 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
ZNF407-202ENST00000309902 CCDC18Q5T9S5 1454 aa9.92□□□□□ -0.82
ZNF407-202ENST00000309902 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
ZNF407-202ENST00000309902 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
ZNF407-202ENST00000309902 NBR1Q14596 966 aa9.92□□□□□ -0.82
ZNF407-202ENST00000309902 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.82
ZNF407-202ENST00000309902 RRP7BPQ9NSQ0 103 aa9.9□□□□□ -0.82
ZNF407-202ENST00000309902 LAMC3Q9Y6N6 1575 aa9.89□□□□□ -0.83
ZNF407-202ENST00000309902 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
ZNF407-202ENST00000309902 GRIN2BQ13224 1484 aa9.89□□□□□ -0.83
ZNF407-202ENST00000309902 BICRAQ9NZM4 1560 aa9.87□□□□□ -0.83
ZNF407-202ENST00000309902 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
ZNF407-202ENST00000309902 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
ZNF407-202ENST00000309902 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
ZNF407-202ENST00000309902 TIMELESSQ9UNS1 1208 aa9.86□□□□□ -0.83
ZNF407-202ENST00000309902 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
ZNF407-202ENST00000309902 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
ZNF407-202ENST00000309902 ANKRD30AQ9BXX3 1397 aa9.85□□□□□ -0.83
ZNF407-202ENST00000309902 EIF4G2P78344 907 aaKnown RBP eCLIP9.85□□□□□ -0.83
ZNF407-202ENST00000309902 PTPRGP23470 1445 aa9.84□□□□□ -0.83
ZNF407-202ENST00000309902 IRX6P78412 446 aaPredicted RBP9.84□□□□□ -0.83
ZNF407-202ENST00000309902 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
ZNF407-202ENST00000309902 MIER1Q8N108 512 aa9.84□□□□□ -0.83
ZNF407-202ENST00000309902 PEG3Q9GZU2 1588 aa9.83□□□□□ -0.84
ZNF407-202ENST00000309902 ERICH3Q5RHP9 1530 aa9.82□□□□□ -0.84
ZNF407-202ENST00000309902 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
ZNF407-202ENST00000309902 SETD5Q9C0A6 1442 aa9.8□□□□□ -0.84
ZNF407-202ENST00000309902 TOP2BQ02880 1626 aa9.8□□□□□ -0.84
ZNF407-202ENST00000309902 ANP32AP39687 249 aaKnown RBP9.79□□□□□ -0.84
ZNF407-202ENST00000309902 FHOD3Q2V2M9 1422 aa9.79□□□□□ -0.84
ZNF407-202ENST00000309902 IGF1RP08069 1367 aa9.79□□□□□ -0.84
ZNF407-202ENST00000309902 TOPBP1Q92547 1522 aa9.78□□□□□ -0.84
ZNF407-202ENST00000309902 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
ZNF407-202ENST00000309902 CUX1P39880 1505 aa9.78□□□□□ -0.84
ZNF407-202ENST00000309902 WDR43Q15061 677 aaKnown RBP eCLIP9.78□□□□□ -0.84
ZNF407-202ENST00000309902 ARXQ96QS3 562 aa9.78□□□□□ -0.84
ZNF407-202ENST00000309902 KIF21BO75037 1637 aa9.78□□□□□ -0.84
ZNF407-202ENST00000309902 RAD54L2Q9Y4B4 1467 aa9.78□□□□□ -0.84
ZNF407-202ENST00000309902 EFCAB5A4FU69 1503 aa9.77□□□□□ -0.85
ZNF407-202ENST00000309902 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
ZNF407-202ENST00000309902 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.75□□□□□ -0.85
ZNF407-202ENST00000309902 DDX10Q13206 875 aaKnown RBP9.74□□□□□ -0.85
ZNF407-202ENST00000309902 SPAG9O60271 1321 aaKnown RBP9.74□□□□□ -0.85
ZNF407-202ENST00000309902 TMC1Q8TDI8 760 aa9.74□□□□□ -0.85
ZNF407-202ENST00000309902 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
ZNF407-202ENST00000309902 POGKQ9P215 609 aa9.73□□□□□ -0.85
ZNF407-202ENST00000309902 UNC13AQ9UPW8 1703 aa9.73□□□□□ -0.85
ZNF407-202ENST00000309902 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
ZNF407-202ENST00000309902 CARD11Q9BXL7 1154 aa9.73□□□□□ -0.85
ZNF407-202ENST00000309902 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.85
ZNF407-202ENST00000309902 TSHZ2Q9NRE2 1034 aa9.72□□□□□ -0.85
ZNF407-202ENST00000309902 HNRNPUQ00839 825 aaKnown RBP eCLIP9.72□□□□□ -0.85
ZNF407-202ENST00000309902 UACAQ9BZF9 1416 aa9.71□□□□□ -0.85
ZNF407-202ENST00000309902 SUPT16HQ9Y5B9 1047 aaKnown RBP9.71□□□□□ -0.85
ZNF407-202ENST00000309902 CUL7Q14999 1698 aa9.71□□□□□ -0.86
ZNF407-202ENST00000309902 EIF3AQ14152 1382 aaKnown RBP9.71□□□□□ -0.86
ZNF407-202ENST00000309902 SENP3-EIF4A1A0A087X0R7 540 aa9.71□□□□□ -0.86
ZNF407-202ENST00000309902 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.86
ZNF407-202ENST00000309902 RGL3Q3MIN7 710 aa9.71□□□□□ -0.86
ZNF407-202ENST00000309902 PNNQ9H307 717 aaKnown RBP9.71□□□□□ -0.86
ZNF407-202ENST00000309902 NESP48681 1621 aa9.7□□□□□ -0.86
ZNF407-202ENST00000309902 KNSTRNQ9Y448 316 aa9.7□□□□□ -0.86
ZNF407-202ENST00000309902 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
ZNF407-202ENST00000309902 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
ZNF407-202ENST00000309902 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
ZNF407-202ENST00000309902 ABCA10Q8WWZ4 1543 aa9.69□□□□□ -0.86
ZNF407-202ENST00000309902 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
ZNF407-202ENST00000309902 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
ZNF407-202ENST00000309902 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms