RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
APTX-201ENST00000309615 GOLGA3Q08378 1498 aa21.14■□□□□ 0.98
APTX-201ENST00000309615 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
APTX-201ENST00000309615 IQGAP2Q13576 1575 aa21.12■□□□□ 0.97
APTX-201ENST00000309615 CTTNBP2Q8WZ74 1663 aa21.11■□□□□ 0.97
APTX-201ENST00000309615 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
APTX-201ENST00000309615 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
APTX-201ENST00000309615 ARHGEF11O15085 1522 aa21.08■□□□□ 0.97
APTX-201ENST00000309615 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
APTX-201ENST00000309615 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
APTX-201ENST00000309615 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
APTX-201ENST00000309615 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
APTX-201ENST00000309615 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
APTX-201ENST00000309615 UGGT2Q9NYU1 1516 aa21.01■□□□□ 0.95
APTX-201ENST00000309615 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
APTX-201ENST00000309615 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
APTX-201ENST00000309615 DISP1Q96F81 1524 aa20.97■□□□□ 0.95
APTX-201ENST00000309615 CARMIL2Q6F5E8 1435 aa20.95■□□□□ 0.94
APTX-201ENST00000309615 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
APTX-201ENST00000309615 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
APTX-201ENST00000309615 KIAA0556O60303 1618 aa20.91■□□□□ 0.94
APTX-201ENST00000309615 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
APTX-201ENST00000309615 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
APTX-201ENST00000309615 SAMD9Q5K651 1589 aa20.87■□□□□ 0.93
APTX-201ENST00000309615 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
APTX-201ENST00000309615 PTPRGP23470 1445 aa20.84■□□□□ 0.93
APTX-201ENST00000309615 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.93
APTX-201ENST00000309615 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
APTX-201ENST00000309615 FHOD3Q2V2M9 1422 aa20.8■□□□□ 0.92
APTX-201ENST00000309615 CLIP1P30622 1438 aa20.78■□□□□ 0.92
APTX-201ENST00000309615 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
APTX-201ENST00000309615 PLB1Q6P1J6 1458 aa20.71■□□□□ 0.91
APTX-201ENST00000309615 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
APTX-201ENST00000309615 ADCY10Q96PN6 1610 aa20.69■□□□□ 0.9
APTX-201ENST00000309615 ABCA8O94911 1581 aa20.67■□□□□ 0.9
APTX-201ENST00000309615 ABCC2Q92887 1545 aa20.66■□□□□ 0.9
APTX-201ENST00000309615 UHRF1BP1LA0JNW5 1464 aa20.65■□□□□ 0.9
APTX-201ENST00000309615 FMN1Q68DA7 1419 aa20.64■□□□□ 0.9
APTX-201ENST00000309615 RAPGEF6Q8TEU7 1601 aa20.61■□□□□ 0.89
APTX-201ENST00000309615 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
APTX-201ENST00000309615 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.88
APTX-201ENST00000309615 NUP153P49790 1475 aaKnown RBP20.57■□□□□ 0.88
APTX-201ENST00000309615 KDM5BQ9UGL1 1544 aa20.56■□□□□ 0.88
APTX-201ENST00000309615 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
APTX-201ENST00000309615 PCF11O94913 1555 aaKnown RBP20.54■□□□□ 0.88
APTX-201ENST00000309615 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
APTX-201ENST00000309615 ZCCHC11Q5TAX3 1644 aaKnown RBP20.53■□□□□ 0.88
APTX-201ENST00000309615 ATP10BO94823 1461 aa20.52■□□□□ 0.88
APTX-201ENST00000309615 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
APTX-201ENST00000309615 VPS8Q8N3P4 1428 aa20.49■□□□□ 0.87
APTX-201ENST00000309615 FYCO1Q9BQS8 1478 aa20.49■□□□□ 0.87
APTX-201ENST00000309615 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
APTX-201ENST00000309615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
APTX-201ENST00000309615 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
APTX-201ENST00000309615 EPRSP07814 1512 aaKnown RBP20.47■□□□□ 0.87
APTX-201ENST00000309615 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
APTX-201ENST00000309615 ASXL2Q76L83 1435 aa20.46■□□□□ 0.87
APTX-201ENST00000309615 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
APTX-201ENST00000309615 CCDC18Q5T9S5 1454 aa20.4■□□□□ 0.86
APTX-201ENST00000309615 WDR7Q9Y4E6 1490 aa20.4■□□□□ 0.86
APTX-201ENST00000309615 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
APTX-201ENST00000309615 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
APTX-201ENST00000309615 ABCC10Q5T3U5 1492 aa20.36■□□□□ 0.85
APTX-201ENST00000309615 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
APTX-201ENST00000309615 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
APTX-201ENST00000309615 DIP2BQ9P265 1576 aa20.33■□□□□ 0.84
APTX-201ENST00000309615 FAM69CQ0P6D2 419 aa20.33■□□□□ 0.84
APTX-201ENST00000309615 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
APTX-201ENST00000309615 KIF13AQ9H1H9 1805 aa20.29■□□□□ 0.84
APTX-201ENST00000309615 TROQ12816 1431 aaPredicted RBP20.28■□□□□ 0.84
APTX-201ENST00000309615 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
APTX-201ENST00000309615 CFAP43Q8NDM7 1665 aa20.27■□□□□ 0.84
APTX-201ENST00000309615 GLI2P10070 1586 aa20.26■□□□□ 0.83
APTX-201ENST00000309615 APLP2Q06481 763 aa20.25■□□□□ 0.83
APTX-201ENST00000309615 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
APTX-201ENST00000309615 MAP3K1Q13233 1512 aa20.25■□□□□ 0.83
APTX-201ENST00000309615 KIF14Q15058 1648 aa20.23■□□□□ 0.83
APTX-201ENST00000309615 KANK4Q5T7N3 995 aaPredicted RBP20.22■□□□□ 0.83
APTX-201ENST00000309615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.83
APTX-201ENST00000309615 LRRC9Q6ZRR7 1453 aa20.2■□□□□ 0.82
APTX-201ENST00000309615 ABCA9Q8IUA7 1624 aa20.2■□□□□ 0.82
APTX-201ENST00000309615 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
APTX-201ENST00000309615 EHBP1L1Q8N3D4 1523 aa20.19■□□□□ 0.82
APTX-201ENST00000309615 CD109Q6YHK3 1445 aa20.18■□□□□ 0.82
APTX-201ENST00000309615 TTC37Q6PGP7 1564 aa20.18■□□□□ 0.82
APTX-201ENST00000309615 TSPOAP1O95153 1857 aa20.15■□□□□ 0.82
APTX-201ENST00000309615 PPRC1Q5VV67 1664 aaKnown RBP20.12■□□□□ 0.81
APTX-201ENST00000309615 NCOA2Q15596 1464 aa20.1■□□□□ 0.81
APTX-201ENST00000309615 SUPT6HQ7KZ85 1726 aaKnown RBP20.09■□□□□ 0.81
APTX-201ENST00000309615 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
APTX-201ENST00000309615 PLCH2O75038 1416 aa20.08■□□□□ 0.81
APTX-201ENST00000309615 TEX14Q8IWB6 1497 aa20.07■□□□□ 0.8
APTX-201ENST00000309615 MYO5CQ9NQX4 1742 aa20.06■□□□□ 0.8
APTX-201ENST00000309615 CCNB3Q8WWL7 1395 aa20.06■□□□□ 0.8
APTX-201ENST00000309615 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
APTX-201ENST00000309615 CDC42BPAQ5VT25 1732 aa20.04■□□□□ 0.8
APTX-201ENST00000309615 FANCAO15360 1455 aa20.04■□□□□ 0.8
APTX-201ENST00000309615 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
APTX-201ENST00000309615 ARAP3Q8WWN8 1544 aa20.03■□□□□ 0.8
APTX-201ENST00000309615 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms