RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
PPARGC1B-201ENST00000309241 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
PPARGC1B-201ENST00000309241 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
PPARGC1B-201ENST00000309241 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
PPARGC1B-201ENST00000309241 LAS1LQ9Y4W2 734 aaKnown RBP11□□□□□ -0.65
PPARGC1B-201ENST00000309241 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
PPARGC1B-201ENST00000309241 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
PPARGC1B-201ENST00000309241 NPHP1O15259 732 aa10.98□□□□□ -0.65
PPARGC1B-201ENST00000309241 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
PPARGC1B-201ENST00000309241 BECN1Q14457 450 aa10.98□□□□□ -0.65
PPARGC1B-201ENST00000309241 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.65
PPARGC1B-201ENST00000309241 A0A0U1RQG5 324 aaPredicted RBP10.95□□□□□ -0.66
PPARGC1B-201ENST00000309241 PPM1GO15355 546 aaPredicted RBP10.95□□□□□ -0.66
PPARGC1B-201ENST00000309241 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
PPARGC1B-201ENST00000309241 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
PPARGC1B-201ENST00000309241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.66
PPARGC1B-201ENST00000309241 PTMSP20962 102 aa10.94□□□□□ -0.66
PPARGC1B-201ENST00000309241 RBM19Q9Y4C8 960 aaKnown RBP10.94□□□□□ -0.66
PPARGC1B-201ENST00000309241 GOLGA6L22H0YM25 854 aa10.93□□□□□ -0.66
PPARGC1B-201ENST00000309241 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
PPARGC1B-201ENST00000309241 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
PPARGC1B-201ENST00000309241 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
PPARGC1B-201ENST00000309241 SENP3Q9H4L4 574 aaPredicted RBP10.91□□□□□ -0.66
PPARGC1B-201ENST00000309241 CHMP4BQ9H444 224 aaKnown RBP10.89□□□□□ -0.67
PPARGC1B-201ENST00000309241 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
PPARGC1B-201ENST00000309241 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
PPARGC1B-201ENST00000309241 HSP90AA2PQ14568 343 aaPredicted RBP10.87□□□□□ -0.67
PPARGC1B-201ENST00000309241 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
PPARGC1B-201ENST00000309241 WDR43Q15061 677 aaKnown RBP eCLIP10.86□□□□□ -0.67
PPARGC1B-201ENST00000309241 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
PPARGC1B-201ENST00000309241 ZRSR1Q15695 479 aaKnown RBP10.84□□□□□ -0.67
PPARGC1B-201ENST00000309241 USP35Q9P2H5 1018 aa10.83□□□□□ -0.68
PPARGC1B-201ENST00000309241 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
PPARGC1B-201ENST00000309241 CLSTN1O94985 981 aa10.82□□□□□ -0.68
PPARGC1B-201ENST00000309241 ARID3AQ99856 593 aa10.82□□□□□ -0.68
PPARGC1B-201ENST00000309241 NRDCO43847 1150 aa10.82□□□□□ -0.68
PPARGC1B-201ENST00000309241 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
PPARGC1B-201ENST00000309241 LMOD2Q6P5Q4 547 aa10.81□□□□□ -0.68
PPARGC1B-201ENST00000309241 PNNQ9H307 717 aaKnown RBP10.81□□□□□ -0.68
PPARGC1B-201ENST00000309241 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
PPARGC1B-201ENST00000309241 GOLGA6L6A8MZA4 724 aa10.79□□□□□ -0.68
PPARGC1B-201ENST00000309241 L1TD1Q5T7N2 865 aaKnown RBP10.79□□□□□ -0.68
PPARGC1B-201ENST00000309241 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
PPARGC1B-201ENST00000309241 PTMAP06454 111 aaKnown RBP10.77□□□□□ -0.69
PPARGC1B-201ENST00000309241 MS4A1P11836 297 aa10.77□□□□□ -0.69
PPARGC1B-201ENST00000309241 CHMP7Q8WUX9 453 aaPredicted RBP10.77□□□□□ -0.69
PPARGC1B-201ENST00000309241 KAT6BQ8WYB5 2073 aa10.76□□□□□ -0.69
PPARGC1B-201ENST00000309241 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
PPARGC1B-201ENST00000309241 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
PPARGC1B-201ENST00000309241 DNTTIP2Q5QJE6 756 aaKnown RBP10.76□□□□□ -0.69
PPARGC1B-201ENST00000309241 DDX10Q13206 875 aaKnown RBP10.75□□□□□ -0.69
PPARGC1B-201ENST00000309241 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
PPARGC1B-201ENST00000309241 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
PPARGC1B-201ENST00000309241 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
PPARGC1B-201ENST00000309241 SCRIBQ14160 1630 aa10.74□□□□□ -0.69
PPARGC1B-201ENST00000309241 CHAF1AQ13111 956 aaPredicted RBP10.74□□□□□ -0.69
PPARGC1B-201ENST00000309241 CASC1Q6TDU7 716 aa10.73□□□□□ -0.69
PPARGC1B-201ENST00000309241 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
PPARGC1B-201ENST00000309241 CDCA8Q53HL2 280 aa10.72□□□□□ -0.69
PPARGC1B-201ENST00000309241 ISY1Q9ULR0 285 aaKnown RBP10.72□□□□□ -0.69
PPARGC1B-201ENST00000309241 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
PPARGC1B-201ENST00000309241 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
PPARGC1B-201ENST00000309241 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
PPARGC1B-201ENST00000309241 CHIC2Q9UKJ5 165 aa10.71□□□□□ -0.69
PPARGC1B-201ENST00000309241 KCNH8Q96L42 1107 aa10.71□□□□□ -0.7
PPARGC1B-201ENST00000309241 UBE2Q2Q8WVN8 375 aa10.7□□□□□ -0.7
PPARGC1B-201ENST00000309241 MSNP26038 577 aaKnown RBP10.68□□□□□ -0.7
PPARGC1B-201ENST00000309241 TNNT3P45378 269 aaPredicted RBP10.68□□□□□ -0.7
PPARGC1B-201ENST00000309241 FGD1P98174 961 aa10.68□□□□□ -0.7
PPARGC1B-201ENST00000309241 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
PPARGC1B-201ENST00000309241 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
PPARGC1B-201ENST00000309241 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
PPARGC1B-201ENST00000309241 OS9Q13438 667 aaPredicted RBP10.67□□□□□ -0.7
PPARGC1B-201ENST00000309241 PRM3Q9NNZ6 103 aa10.66□□□□□ -0.7
PPARGC1B-201ENST00000309241 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■■■□ 19.3
PPARGC1B-201ENST00000309241 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
PPARGC1B-201ENST00000309241 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.7
PPARGC1B-201ENST00000309241 NAP1L2Q9ULW6 460 aaPredicted RBP10.65□□□□□ -0.71
PPARGC1B-201ENST00000309241 ERCC6Q03468 1493 aa10.65□□□□□ -0.71
PPARGC1B-201ENST00000309241 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
PPARGC1B-201ENST00000309241 TMX4Q9H1E5 349 aaPredicted RBP10.63□□□□□ -0.71
PPARGC1B-201ENST00000309241 POGKQ9P215 609 aa10.62□□□□□ -0.71
PPARGC1B-201ENST00000309241 CCER2I3L3R5 266 aa10.62□□□□□ -0.71
PPARGC1B-201ENST00000309241 KCNJ4P48050 445 aa10.61□□□□□ -0.71
PPARGC1B-201ENST00000309241 IPO9Q96P70 1041 aaKnown RBP10.61□□□□□ -0.71
PPARGC1B-201ENST00000309241 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
PPARGC1B-201ENST00000309241 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
PPARGC1B-201ENST00000309241 FANCIQ9NVI1 1328 aa10.61□□□□□ -0.71
PPARGC1B-201ENST00000309241 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
PPARGC1B-201ENST00000309241 MAPK8IP3Q9UPT6 1336 aa10.59□□□□□ -0.71
PPARGC1B-201ENST00000309241 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
PPARGC1B-201ENST00000309241 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
PPARGC1B-201ENST00000309241 MTERF4Q7Z6M4 381 aaKnown RBP10.58□□□□□ -0.72
PPARGC1B-201ENST00000309241 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
PPARGC1B-201ENST00000309241 KNSTRNQ9Y448 316 aa10.57□□□□□ -0.72
PPARGC1B-201ENST00000309241 PDE4CQ08493 712 aa10.56□□□□□ -0.72
PPARGC1B-201ENST00000309241 CLIP1P30622 1438 aa10.56□□□□□ -0.72
PPARGC1B-201ENST00000309241 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
PPARGC1B-201ENST00000309241 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
PPARGC1B-201ENST00000309241 PLEKHD1A6NEE1 506 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms