RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
PPARGC1B-201ENST00000309241 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
PPARGC1B-201ENST00000309241 MYT1Q01538 1121 aa13.73□□□□□ -0.21
PPARGC1B-201ENST00000309241 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
PPARGC1B-201ENST00000309241 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
PPARGC1B-201ENST00000309241 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
PPARGC1B-201ENST00000309241 NISCHQ9Y2I1 1504 aa12.9□□□□□ -0.34
PPARGC1B-201ENST00000309241 APLP2Q06481 763 aa12.9□□□□□ -0.34
PPARGC1B-201ENST00000309241 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1B-201ENST00000309241 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1B-201ENST00000309241 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
PPARGC1B-201ENST00000309241 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
PPARGC1B-201ENST00000309241 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
PPARGC1B-201ENST00000309241 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
PPARGC1B-201ENST00000309241 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
PPARGC1B-201ENST00000309241 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
PPARGC1B-201ENST00000309241 HRCP23327 699 aa12.5□□□□□ -0.41
PPARGC1B-201ENST00000309241 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
PPARGC1B-201ENST00000309241 RANGAP1P46060 587 aaPredicted RBP12.45□□□□□ -0.42
PPARGC1B-201ENST00000309241 NEFLP07196 543 aa12.3□□□□□ -0.44
PPARGC1B-201ENST00000309241 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
PPARGC1B-201ENST00000309241 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
PPARGC1B-201ENST00000309241 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
PPARGC1B-201ENST00000309241 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
PPARGC1B-201ENST00000309241 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
PPARGC1B-201ENST00000309241 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
PPARGC1B-201ENST00000309241 GTF3C3Q9Y5Q9 886 aa12.09□□□□□ -0.47
PPARGC1B-201ENST00000309241 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
PPARGC1B-201ENST00000309241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
PPARGC1B-201ENST00000309241 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
PPARGC1B-201ENST00000309241 POLR3GLQ9BT43 218 aa12.01□□□□□ -0.49
PPARGC1B-201ENST00000309241 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
PPARGC1B-201ENST00000309241 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
PPARGC1B-201ENST00000309241 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
PPARGC1B-201ENST00000309241 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
PPARGC1B-201ENST00000309241 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
PPARGC1B-201ENST00000309241 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-201ENST00000309241 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-201ENST00000309241 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
PPARGC1B-201ENST00000309241 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
PPARGC1B-201ENST00000309241 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
PPARGC1B-201ENST00000309241 ITGAEP38570 1179 aa11.79□□□□□ -0.52
PPARGC1B-201ENST00000309241 BCANQ96GW7 911 aa11.77□□□□□ -0.53
PPARGC1B-201ENST00000309241 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
PPARGC1B-201ENST00000309241 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
PPARGC1B-201ENST00000309241 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
PPARGC1B-201ENST00000309241 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.54
PPARGC1B-201ENST00000309241 NEUROD1Q13562 356 aa11.59□□□□□ -0.55
PPARGC1B-201ENST00000309241 CDK11AQ9UQ88 783 aaPredicted RBP11.58□□□□□ -0.56
PPARGC1B-201ENST00000309241 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
PPARGC1B-201ENST00000309241 NEFMP07197 916 aa11.5□□□□□ -0.57
PPARGC1B-201ENST00000309241 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
PPARGC1B-201ENST00000309241 NBR1Q14596 966 aa11.49□□□□□ -0.57
PPARGC1B-201ENST00000309241 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
PPARGC1B-201ENST00000309241 FBLN2P98095 1184 aa11.47□□□□□ -0.57
PPARGC1B-201ENST00000309241 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
PPARGC1B-201ENST00000309241 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
PPARGC1B-201ENST00000309241 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.58
PPARGC1B-201ENST00000309241 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
PPARGC1B-201ENST00000309241 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
PPARGC1B-201ENST00000309241 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
PPARGC1B-201ENST00000309241 DCAF1Q9Y4B6 1507 aa11.38□□□□□ -0.59
PPARGC1B-201ENST00000309241 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
PPARGC1B-201ENST00000309241 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
PPARGC1B-201ENST00000309241 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
PPARGC1B-201ENST00000309241 A0A0G2JS52 829 aa11.32□□□□□ -0.6
PPARGC1B-201ENST00000309241 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
PPARGC1B-201ENST00000309241 FKBP8Q14318 412 aa11.3□□□□□ -0.6
PPARGC1B-201ENST00000309241 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
PPARGC1B-201ENST00000309241 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
PPARGC1B-201ENST00000309241 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
PPARGC1B-201ENST00000309241 ANP32CO43423 234 aa11.24□□□□□ -0.61
PPARGC1B-201ENST00000309241 CDK11BP21127 795 aaKnown RBP11.23□□□□□ -0.61
PPARGC1B-201ENST00000309241 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
PPARGC1B-201ENST00000309241 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
PPARGC1B-201ENST00000309241 ARID3CA6NKF2 412 aa11.21□□□□□ -0.62
PPARGC1B-201ENST00000309241 HSP90AA1P07900 732 aaKnown RBP11.21□□□□□ -0.62
PPARGC1B-201ENST00000309241 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
PPARGC1B-201ENST00000309241 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
PPARGC1B-201ENST00000309241 UPF2Q9HAU5 1272 aaKnown RBP11.19□□□□□ -0.62
PPARGC1B-201ENST00000309241 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
PPARGC1B-201ENST00000309241 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
PPARGC1B-201ENST00000309241 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPARGC1B-201ENST00000309241 ARXQ96QS3 562 aa11.17□□□□□ -0.62
PPARGC1B-201ENST00000309241 NAP1L5Q96NT1 182 aaPredicted RBP11.16□□□□□ -0.62
PPARGC1B-201ENST00000309241 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
PPARGC1B-201ENST00000309241 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
PPARGC1B-201ENST00000309241 ABCC9O60706 1549 aa11.15□□□□□ -0.62
PPARGC1B-201ENST00000309241 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
PPARGC1B-201ENST00000309241 TRIM44Q96DX7 344 aaPredicted RBP11.13□□□□□ -0.63
PPARGC1B-201ENST00000309241 C14orf37Q86TY3 774 aa11.1□□□□□ -0.63
PPARGC1B-201ENST00000309241 DDRGK1Q96HY6 314 aa11.07□□□□□ -0.64
PPARGC1B-201ENST00000309241 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 EEA1Q15075 1411 aa11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 PKNOX2Q96KN3 472 aa11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
PPARGC1B-201ENST00000309241 MIER1Q8N108 512 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms