RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 KIF21BO75037 1637 aa23.44■■□□□ 1.34
CCDC8-201ENST00000307522 PRXQ9BXM0 1461 aa23.44■■□□□ 1.34
CCDC8-201ENST00000307522 VPS8Q8N3P4 1428 aa23.44■■□□□ 1.34
CCDC8-201ENST00000307522 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
CCDC8-201ENST00000307522 RBM19Q9Y4C8 960 aaKnown RBP23.38■■□□□ 1.33
CCDC8-201ENST00000307522 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.32
CCDC8-201ENST00000307522 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
CCDC8-201ENST00000307522 FBLN2P98095 1184 aa23.27■■□□□ 1.32
CCDC8-201ENST00000307522 MSH5O43196 834 aa23.27■■□□□ 1.32
CCDC8-201ENST00000307522 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
CCDC8-201ENST00000307522 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
CCDC8-201ENST00000307522 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
CCDC8-201ENST00000307522 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
CCDC8-201ENST00000307522 CLSPNQ9HAW4 1339 aa23.18■■□□□ 1.3
CCDC8-201ENST00000307522 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC8-201ENST00000307522 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
CCDC8-201ENST00000307522 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
CCDC8-201ENST00000307522 TRIM52Q96A61 297 aa23.13■■□□□ 1.29
CCDC8-201ENST00000307522 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
CCDC8-201ENST00000307522 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
CCDC8-201ENST00000307522 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.29
CCDC8-201ENST00000307522 ANO8Q9HCE9 1232 aaPredicted RBP23.06■■□□□ 1.28
CCDC8-201ENST00000307522 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
CCDC8-201ENST00000307522 NEFLP07196 543 aa23.04■■□□□ 1.28
CCDC8-201ENST00000307522 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
CCDC8-201ENST00000307522 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
CCDC8-201ENST00000307522 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
CCDC8-201ENST00000307522 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
CCDC8-201ENST00000307522 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
CCDC8-201ENST00000307522 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
CCDC8-201ENST00000307522 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
CCDC8-201ENST00000307522 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
CCDC8-201ENST00000307522 PHLDB1Q86UU1 1377 aa22.93■■□□□ 1.26
CCDC8-201ENST00000307522 DEKP35659 375 aaKnown RBP22.92■■□□□ 1.26
CCDC8-201ENST00000307522 CCNB3Q8WWL7 1395 aa22.92■■□□□ 1.26
CCDC8-201ENST00000307522 NBR1Q14596 966 aa22.91■■□□□ 1.26
CCDC8-201ENST00000307522 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
CCDC8-201ENST00000307522 CCDC136Q96JN2 1154 aa22.9■■□□□ 1.26
CCDC8-201ENST00000307522 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
CCDC8-201ENST00000307522 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
CCDC8-201ENST00000307522 DHX57Q6P158 1386 aaKnown RBP22.82■■□□□ 1.24
CCDC8-201ENST00000307522 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
CCDC8-201ENST00000307522 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
CCDC8-201ENST00000307522 RTN4Q9NQC3 1192 aaKnown RBP22.8■■□□□ 1.24
CCDC8-201ENST00000307522 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
CCDC8-201ENST00000307522 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
CCDC8-201ENST00000307522 LRRC9Q6ZRR7 1453 aa22.77■■□□□ 1.24
CCDC8-201ENST00000307522 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
CCDC8-201ENST00000307522 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
CCDC8-201ENST00000307522 RAB3GAP2Q9H2M9 1393 aa22.74■■□□□ 1.23
CCDC8-201ENST00000307522 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
CCDC8-201ENST00000307522 CDK11AQ9UQ88 783 aaPredicted RBP22.71■■□□□ 1.23
CCDC8-201ENST00000307522 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.69■■□□□ 1.22
CCDC8-201ENST00000307522 ZNF777Q9ULD5 760 aaPredicted RBP22.68■■□□□ 1.22
CCDC8-201ENST00000307522 RRBP1Q9P2E9 1410 aaKnown RBP22.67■■□□□ 1.22
CCDC8-201ENST00000307522 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
CCDC8-201ENST00000307522 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
CCDC8-201ENST00000307522 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
CCDC8-201ENST00000307522 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
CCDC8-201ENST00000307522 ZNF644Q9H582 1327 aaPredicted RBP22.61■■□□□ 1.21
CCDC8-201ENST00000307522 FANCIQ9NVI1 1328 aa22.6■■□□□ 1.21
CCDC8-201ENST00000307522 CUL7Q14999 1698 aa22.6■■□□□ 1.21
CCDC8-201ENST00000307522 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
CCDC8-201ENST00000307522 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
CCDC8-201ENST00000307522 PAK3O75914 559 aaPredicted RBP22.59■■□□□ 1.21
CCDC8-201ENST00000307522 FOXD1Q16676 465 aa22.59■■□□□ 1.21
CCDC8-201ENST00000307522 IL27Q8NEV9 243 aa22.58■■□□□ 1.2
CCDC8-201ENST00000307522 WDR97A6NE52 1622 aa22.58■■□□□ 1.2
CCDC8-201ENST00000307522 CDK13Q14004 1512 aaKnown RBP22.57■■□□□ 1.2
CCDC8-201ENST00000307522 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
CCDC8-201ENST00000307522 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
CCDC8-201ENST00000307522 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
CCDC8-201ENST00000307522 CTTNBP2Q8WZ74 1663 aa22.53■■□□□ 1.2
CCDC8-201ENST00000307522 SETD5Q9C0A6 1442 aa22.52■■□□□ 1.2
CCDC8-201ENST00000307522 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
CCDC8-201ENST00000307522 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
CCDC8-201ENST00000307522 ANP32CO43423 234 aa22.5■■□□□ 1.19
CCDC8-201ENST00000307522 PTPRKQ15262 1439 aa22.5■■□□□ 1.19
CCDC8-201ENST00000307522 NCOA2Q15596 1464 aa22.47■■□□□ 1.19
CCDC8-201ENST00000307522 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
CCDC8-201ENST00000307522 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
CCDC8-201ENST00000307522 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
CCDC8-201ENST00000307522 MAGI3Q5TCQ9 1506 aa22.43■■□□□ 1.18
CCDC8-201ENST00000307522 IQGAP2Q13576 1575 aa22.43■■□□□ 1.18
CCDC8-201ENST00000307522 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
CCDC8-201ENST00000307522 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
CCDC8-201ENST00000307522 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
CCDC8-201ENST00000307522 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
CCDC8-201ENST00000307522 NOP58Q9Y2X3 529 aaKnown RBP22.41■■□□□ 1.18
CCDC8-201ENST00000307522 WDR62O43379 1518 aa22.41■■□□□ 1.18
CCDC8-201ENST00000307522 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
CCDC8-201ENST00000307522 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
CCDC8-201ENST00000307522 CNGB1Q14028 1251 aaPredicted RBP22.36■■□□□ 1.17
CCDC8-201ENST00000307522 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
CCDC8-201ENST00000307522 LRRIQ1Q96JM4 1722 aa22.36■■□□□ 1.17
CCDC8-201ENST00000307522 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
CCDC8-201ENST00000307522 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
CCDC8-201ENST00000307522 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
CCDC8-201ENST00000307522 MYOM3Q5VTT5 1437 aa22.33■■□□□ 1.16
CCDC8-201ENST00000307522 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms